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2024-06-16 13:17:45

Gene list

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COG category: Unclassified
Genomic element: pCD1

Number of genes found: 30

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPCD1.07 hypothetical proteinpCD1 CDS4261 297 + 0.373737
NA YPCD1.22c hypothetical proteinpCD1 CDS14020 390 - 0.276923
NA YPCD1.23 hypothetical proteinpCD1 CDS14681 420 + 0.388095
NA YPCD1.92 hypothetical proteinpCD1 CDS66503 330 + 0.281818
NA YPCD1.73c hypothetical proteinpCD1 CDS53679 450 - 0.451111
NA YPCD1.91n hypothetical proteinpCD1 CDS65900 465 + 0.301075
lcrE YPCD1.39c secretion control proteinpCD1 CDS27107 882 - 0.461451
lcrR YPCD1.33c low calcium response protein RpCD1 CDS23246 441 - 0.487528
lcrV YPCD1.31c secreted effector proteinpCD1 CDS21935 981 - 0.377166
repA1 YPCD1.77c replication proteinpCD1 CDS56291 867 - 0.542099
sycH YPCD1.95c secretion chaperonepCD1 CDS68179 426 - 0.41784
sycN YPCD1.37c hypothetical proteinpCD1 CDS26490 372 - 0.526882
sycT YPCD1.21 YopT chaperonepCD1 CDS13578 399 + 0.411028
tap YPCD1.78c repA translation proteinpCD1 CDS57150 75 - 0.44
tyeA YPCD1.38c Yop secretion and targeting control proteinpCD1 CDS26848 279 - 0.433692
virG YPCD1.48 needle complex outer membrane lipoprotein precursorpCD1 CDS35593 396 + 0.444444
yerA YPCD1.05c secretion chaperonepCD1 CDS3014 393 - 0.409669
yopE YPCD1.06 putative outer membrane virulence proteinpCD1 CDS3600 660 + 0.510606
yopH YPCD1.67c putative secreted protein-tyrosine phosphatasepCD1 CDS47122 1407 - 0.474058
yopJ YPCD1.71c targeted effector proteinpCD1 CDS50211 867 - 0.344867
yopQ YPCD1.19c Yop targeting proteinpCD1 CDS11562 549 - 0.335155
yopT YPCD1.20 Yop targeted effectorpCD1 CDS12610 969 + 0.431373
yscA YPCD1.50 hypothetical proteinpCD1 CDS37006 99 + 0.313131
yscE YPCD1.54 type III secretion apparatus componentpCD1 CDS40825 201 + 0.422886
yscF YPCD1.55 needle complex major subunitpCD1 CDS41026 264 + 0.416667
yscG YPCD1.56 type III secretion apparatus componentpCD1 CDS41291 348 + 0.439655
yscK YPCD1.60 type III secretion apparatus componentpCD1 CDS43221 630 + 0.485714
yscO YPCD1.41 type III secretion apparatus componentpCD1 CDS29502 465 + 0.458065
yscP YPCD1.42 type III secretion apparatus componentpCD1 CDS29966 1368 + 0.486842
yscX YPCD1.36c hypothetical proteinpCD1 CDS26125 369 - 0.495935