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2024-06-25 08:34:49

Gene list

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COG category: Unclassified
Genomic element: pSS_046

Number of genes found: 69

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SSO_P069 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS65173 915 - 0.571585
NA SSO_P135 IS91 ORFSubName: Full=IS91 ORF; pSS_046 CDS121226 357 - 0.52381
NA SSO_P023 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS18113 225 - 0.515556
NA SSO_P209 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS183349 1200 - 0.575
NA SSO_P078 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS71581 294 + 0.561224
NA SSO_P148 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS133174 186 + 0.424731
NA SSO_P187 putative antirestriction proteinSubName: Full=Putative antirestriction protein; pSS_046 CDS164665 348 + 0.543103
NA SSO_P168 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS148309 270 + 0.503704
NA SSO_P040 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS35770 1200 + 0.575
NA SSO_P136 putative IS91 ORF2SubName: Full=Putative IS91 ORF2; pSS_046 CDS121582 423 - 0.472813
NA SSO_P206 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS182317 192 + 0.520833
NA SSO_P211 putative transposaseSubName: Full=Putative transposase; pSS_046 CDS185165 168 + 0.482143
NA SSO_P214 IS91 ORFSubName: Full=IS91 ORF; pSS_046 CDS188127 1074 - 0.549348
NA SSO_P238 putative IS91 ORF2SubName: Full=Putative IS91 ORF2; pSS_046 CDS209503 366 - 0.530055
NA SSO_P240 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS210796 693 - 0.344877
NA SSO_P057 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS52274 252 - 0.436508
NA SSO_P185 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS162929 429 + 0.599068
NA SSO_P020 putative transposase, fragmentSubName: Full=Putative transposase; pSS_046 CDS16042 159 + 0.339623
NA SSO_P219 putative IS91 ORF2SubName: Full=Putative IS91 ORF2; pSS_046 CDS190770 234 - 0.448718
NA SSO_P005 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS3363 219 + 0.378995
NA SSO_P199 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS177395 264 + 0.583333
NA SSO_P062 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS59338 906 + 0.571744
NA SSO_P070 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS66068 273 - 0.498168
NA SSO_P047 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS42373 273 + 0.498168
NA SSO_P215 putative IS91 ORF2SubName: Full=Putative IS91 ORF2; pSS_046 CDS189314 186 - 0.591398
NA SSO_P118 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS108668 234 + 0.316239
NA SSO_P048 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS42626 1209 + 0.574028
NA SSO_P220 IS1294 ORFSubName: Full=IS1294 ORF; pSS_046 CDS191333 1209 - 0.574855
NA SSO_P195 oriT nicking and unwinding protein, fragmentSubName: Full=OriT nicking and unwinding protein; pSS_046 CDS175043 837 + 0.622461
NA SSO_P015 putative IS91 ORF2SubName: Full=Putative IS91 ORF2; pSS_046 CDS12450 186 - 0.537634
NA SSO_P156 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS137720 639 - 0.370892
NA SSO_P011 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS9390 579 - 0.312608
NA SSO_P083 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS76173 201 + 0.38806
NA SSO_P222 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS192522 273 - 0.498168
NA SSO_P014 IS91 ORFSubName: Full=IS91 ORF; pSS_046 CDS12094 357 - 0.521008
NA SSO_P126 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS115155 717 - 0.316597
finO SSO_P197 FinOSubName: Full=Conjugative transfer: regulation; SubName: Full=FinO; pSS_046 CDS176701 561 + 0.565062
hmo SSO_P201 putative regulatorSubName: Full=Putative regulator; pSS_046 CDS178354 210 + 0.366667
icsB SSO_P094 IcsBSubName: Full=IcsB; pSS_046 CDS87785 1485 - 0.340067
ipaA SSO_P087 IpaASubName: Full=IpaA; pSS_046 CDS80398 1902 - 0.353312
ipaC SSO_P089 IpaCSubName: Full=IpaC; pSS_046 CDS83357 1092 - 0.389194
ipaJ SSO_P084 IpaJSubName: Full=IpaJ; pSS_046 CDS77287 780 + 0.378205
ipgA SSO_P093 IpgASubName: Full=IpgA; pSS_046 CDS87383 390 - 0.302564
ipgB1 SSO_P092 IpgB1SubName: Full=IpgB1; pSS_046 CDS86741 627 - 0.334928
ipgB2 SSO_P024 IpgB2SubName: Full=IpgB2; pSS_046 CDS18740 567 + 0.329806
ipgD SSO_P095 IpgDSubName: Full=IpgD; pSS_046 CDS89583 1617 + 0.354978
ipgE SSO_P096 IpgESubName: Full=IpgE; pSS_046 CDS91209 363 + 0.349862
mkaD SSO_P009 mouse killing factorRecName: Full=Phosphothreonine lyase OspF; EC=4.2.3.-; AltName: Full=Effector protein OspF; pSS_046 CDS7632 720 - 0.379167
mob9 SSO_P171 plasmid mobilization proteinSubName: Full=Plasmid mobilization protein; pSS_046 CDS149488 180 - 0.472222
mxiH SSO_P099 MxiHSubName: Full=MxiH; pSS_046 CDS93161 252 + 0.34127
mxiI SSO_P100 MxiISubName: Full=MxiI; pSS_046 CDS93425 294 + 0.35034
mxiK SSO_P102 MxiKSubName: Full=MxiK; pSS_046 CDS94446 528 + 0.339015
mxiL SSO_P104 MxiLSubName: Full=MxiL; pSS_046 CDS95603 408 + 0.303922
mxiM SSO_P105 MxiMSubName: Full=MxiM; pSS_046 CDS95994 429 + 0.296037
mxiN SSO_P103 MxiNSubName: Full=MxiN; pSS_046 CDS94915 696 + 0.318966
ospC1 SSO_P049 OspC1SubName: Full=OspC1; pSS_046 CDS44739 1413 + 0.319887
ospC2 SSO_P065 OspC2SubName: Full=OspC2; pSS_046 CDS61538 1455 - 0.323711
ospC3 SSO_P072 OspC3SubName: Full=OspC3; pSS_046 CDS67363 1455 + 0.310653
ospD2 SSO_P008 OspD2SubName: Full=OspD2; pSS_046 CDS5491 1710 - 0.331579
ospD3 SSO_P050 OspD3SubName: Full=OspD3; pSS_046 CDS46480 1698 + 0.35689
ospE2 SSO_P044 OspE2SubName: Full=OspE2; pSS_046 CDS40541 267 + 0.337079
ospE2 SSO_P213 truncated OspE2 pSS_046 CDS187467 168 - 0.333333
repA SSO_P205 RepASubName: Full=RepA; pSS_046 CDS180760 858 + 0.586247
repB SSO_P204 RepBSubName: Full=RepB; pSS_046 CDS180209 261 + 0.417625
spa15 SSO_P110 Spa15SubName: Full=Spa15; pSS_046 CDS102043 402 + 0.330846
virA SSO_P142 VirARecName: Full=Cysteine protease-like VirA; EC=3.4.22.-; AltName: Full=Effector protein VirA; pSS_046 CDS124335 1203 - 0.351621
wbgV SSO_P229 putative glycosyltransferaseSubName: Full=Putative glycosyltransferase; pSS_046 CDS200756 1245 + 0.298795
yacB SSO_P169 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS148652 150 + 0.52
yigA SSO_P198 hypothetical proteinSubName: Full=Uncharacterized protein; pSS_046 CDS177391 213 + 0.615023