Gene list
Applied filters:
COG category: Unclassified
Genomic element: pCD1
Number of genes found: 36
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Yersinia pestis biovar Microtus str. 91001, 91001 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YP_pCD59 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 42691 | 210 | + | 0.428571 |
NA | YP_pCD64 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 45633 | 420 | - | 0.388095 |
NA | YP_pCD09 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 5416 | 219 | - | 0.488584 |
NA | YP_pCD76 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 54686 | 249 | + | 0.502008 |
NA | YP_pCD62 | hypothetical protein | SubName: Full=Transposase; SubName: Full=Uncharacterized protein; | pCD1 | CDS | 44639 | 120 | - | 0.475 |
NA | YP_pCD10 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 5934 | 243 | + | 0.539095 |
NA | YP_pCD91 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 62716 | 465 | - | 0.301075 |
NA | YP_pCD84 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 58463 | 216 | - | 0.49537 |
NA | YP_pCD12 | hypothetial protein | SubName: Full=Hypothetial protein; SubName: Full=Uncharacterized protein; | pCD1 | CDS | 6747 | 450 | + | 0.451111 |
NA | YP_pCD80 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 56176 | 297 | - | 0.373737 |
NA | YP_pCD65 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 46324 | 390 | + | 0.276923 |
NA | YP_pCD90 | hypothetical protein | SubName: Full=Uncharacterized protein; | pCD1 | CDS | 62248 | 330 | - | 0.281818 |
lcrR | YP_pCD50 | hypothetical protein LcrR | RecName: Full=Low calcium response locus protein R; | pCD1 | CDS | 37189 | 441 | + | 0.489796 |
lcrV | YP_pCD52 | V antigen LcrV | RecName: Full=Virulence-associated V antigen; AltName: Full=Low calcium response locus protein V; | pCD1 | CDS | 37960 | 975 | + | 0.377436 |
repA | YP_pCD08 | replication protein RepA-like protein | SubName: Full=Putative replication initiation protein; SubName: Full=Replication protein; SubName: Full=Replication protein RepA-like protein; | pCD1 | CDS | 3723 | 867 | + | 0.542099 |
sycE | YP_pCD82 | putative yopE chaperone SycE | RecName: Full=YopE regulator; | pCD1 | CDS | 57327 | 393 | + | 0.409669 |
sycH | YP_pCD87 | putative yopH targeting protein SycH | SubName: Full=Putative yopH targeting protein; SubName: Full=Putative yopH targeting protein SycH; SubName: Full=YopH chaperone; SubName: Full=YopH chaperone SycH protein homolog; | pCD1 | CDS | 60476 | 426 | + | 0.41784 |
sycN | YP_pCD46 | putative type III secretion protein SycN | RecName: Full=Chaperone protein SycN; | pCD1 | CDS | 34014 | 372 | + | 0.526882 |
sycT | YP_pCD66 | putative yopT chaperone SycT | RecName: Full=Chaperone protein SycT; | pCD1 | CDS | 46757 | 399 | - | 0.411028 |
tap | YP_pCD07 | putative repA translation protein | SubName: Full=Putative repA translation protein; SubName: Full=RepA translation protein; | pCD1 | CDS | 3656 | 75 | + | 0.44 |
tyeA | YP_pCD45 | Yop secretion and targeting control protein TyeA | RecName: Full=Protein TyeA; | pCD1 | CDS | 33749 | 279 | + | 0.433692 |
virG | YP_pCD35 | putative Yop targeting lipoprotein VirG | SubName: Full=Pre-lipoprotein VirG homolog; SubName: Full=Putative Yop targeting lipoprotein; SubName: Full=Putative Yop targeting lipoprotein VirG; SubName: Full=YscC lipoprotein chaperone; | pCD1 | CDS | 24887 | 396 | - | 0.444444 |
yopE | YP_pCD81 | putative outer membrane virulence protein YopE | RecName: Full=Outer membrane virulence protein YopE; | pCD1 | CDS | 56474 | 660 | - | 0.510606 |
yopH | YP_pCD17 | putative protein-tyrosine phosphatase Yop effector YopH | SubName: Full=Targeted effector protein; SubName: Full=Type III secretion injected virulence protein; SubName: Full=Uncharacterized protein; SubName: Full=YopH; | pCD1 | CDS | 12347 | 1407 | + | 0.474058 |
yopJ | YP_pCD14 | putative targeted effector protein YopJ | SubName: Full=Putative targeted effector protein YopJ; | pCD1 | CDS | 9798 | 867 | + | 0.346021 |
yopN | YP_pCD44 | putative membrane-bound Yop targeting protein YopN | RecName: Full=Outer membrane protein YopN; AltName: Full=LcrE; AltName: Full=Yop4b; | pCD1 | CDS | 32887 | 882 | + | 0.460317 |
yopQ | YP_pCD68 | putative virulence determinant protein YopQ | SubName: Full=Putative virulence determinant protein YopQ; | pCD1 | CDS | 48608 | 564 | + | 0.336879 |
yopT | YP_pCD67 | putative cytotoxic effector protein YopT | RecName: Full=Cysteine protease YopT; EC=3.4.22.-; | pCD1 | CDS | 47155 | 969 | - | 0.431373 |
yscA | YP_pCD33 | hypothetical protein YscA | RecName: Full=Yop proteins translocation protein A; | pCD1 | CDS | 23771 | 99 | - | 0.313131 |
yscE | YP_pCD29 | putative type III secretion protein YscE | SubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscE; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein E homolog; | pCD1 | CDS | 19850 | 201 | - | 0.422886 |
yscF | YP_pCD28 | putative type III secretion protein YscF | SubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscF; SubName: Full=Type III secretion cytoplasmic protein; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein F homolog; | pCD1 | CDS | 19586 | 264 | - | 0.416667 |
yscG | YP_pCD27 | putative type III secretion protein YscG | SubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscG; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein G homolog; | pCD1 | CDS | 19237 | 348 | - | 0.439655 |
yscK | YP_pCD23 | putative type III secretion protein YscK | RecName: Full=Yop proteins translocation protein K; AltName: Full=Low calcium response locus protein KB; | pCD1 | CDS | 17025 | 651 | - | 0.483871 |
yscO | YP_pCD42 | putative type III secretion protein YscO | SubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscO; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein O; SubName: Full=YscO; | pCD1 | CDS | 30909 | 465 | - | 0.458065 |
yscP | YP_pCD41 | putative type III secretion protein YscP | RecName: Full=Yop proteins translocation protein P; | pCD1 | CDS | 29542 | 1368 | - | 0.486842 |
yscX | YP_pCD47 | putative type III secretion protein YscX | RecName: Full=Yop proteins translocation protein X; | pCD1 | CDS | 34382 | 369 | + | 0.495935 |