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2024-06-26 03:22:47

Gene list

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COG category: Unclassified
Genomic element: pHCM1

Number of genes found: 127

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Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA HCM1.278c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS211468 357 - 0.515406
NA HCM1.175 putative DNA-binding proteinSubName: Full=Putative DNA-binding protein; SubName: Full=Uncharacterized protein; pHCM1 CDS128603 807 + 0.526642
NA HCM1.261 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS191440 564 + 0.445035
NA HCM1.109 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS85404 378 + 0.375661
NA HCM1.122 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS97008 936 + 0.382479
NA HCM1.20c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS5833 492 - 0.477642
NA HCM1.117 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS91923 1254 + 0.460128
NA HCM1.282 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS214547 324 + 0.453704
NA HCM1.51 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS27180 297 + 0.52862
NA HCM1.17c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS5484 261 - 0.482759
NA HCM1.118 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS93451 525 + 0.375238
NA HCM1.43 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS20698 777 + 0.528958
NA HCM1.197c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS149132 426 - 0.492958
NA HCM1.251c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS185006 615 - 0.552846
NA HCM1.193c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS142344 609 - 0.343186
NA HCM1.279c hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS211911 315 - 0.431746
NA HCM1.279bc hypothetical proteinRecName: Full=UPF0401 protein YubL; pHCM1 CDS213149 237 - 0.535865
NA HCM1.161 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS118573 213 + 0.591549
NA HCM1.126 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS100411 258 + 0.476744
NA HCM1.174 putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS127673 492 + 0.428862
NA HCM1.141 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS109949 1074 + 0.511173
NA HCM1.281c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS214057 438 - 0.445205
NA HCM1.288 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS217313 192 + 0.505208
NA HCM1.41 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS19211 327 + 0.565749
NA HCM1.34c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS14709 807 - 0.50062
NA HCM1.279ac hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS212540 237 - 0.514768
NA HCM1.269 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS201431 486 + 0.40535
NA HCM1.71 putative periplasmic proteinSubName: Full=Putative periplasmic protein; SubName: Full=Uncharacterized protein; pHCM1 CDS45878 1233 + 0.440389
NA HCM1.92 putative plasmid stability/partition proteinSubName: Full=Putative plasmid partition protein; SubName: Full=Putative plasmid stability/partition protein; SubName: Full=StbA; pHCM1 CDS62245 1035 + 0.421256
NA HCM1.132 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS103302 909 + 0.49505
NA HCM1.185c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS135898 1296 - 0.50463
NA HCM1.33c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS14215 513 - 0.500975
NA HCM1.176 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS129515 420 + 0.502381
NA HCM1.229c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS171362 237 - 0.691983
NA HCM1.35c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS15743 192 - 0.5
NA HCM1.49c putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS23840 2385 - 0.516562
NA HCM1.43a hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS21539 123 + 0.544715
NA HCM1.123 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS98120 957 + 0.420063
NA HCM1.29c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS9866 732 - 0.539617
NA HCM1.144 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS112168 201 + 0.517413
NA HCM1.149 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS113598 927 + 0.509169
NA HCM1.02c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS742 312 - 0.509615
NA HCM1.10c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS4363 207 - 0.531401
NA HCM1.268c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS199873 801 - 0.388265
NA HCM1.280c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS213431 546 - 0.494505
NA HCM1.45 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS22009 360 + 0.511111
NA HCM1.225 putative transposaseSubName: Full=Putative transposase; pHCM1 CDS168741 621 + 0.536232
NA HCM1.199c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS150147 360 - 0.427778
NA HCM1.60c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS38490 822 - 0.450122
NA HCM1.30c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS10705 225 - 0.475556
NA HCM1.44 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS21663 342 + 0.491228
NA HCM1.97 putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS66122 4299 + 0.455222
NA HCM1.23c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS7312 285 - 0.414035
NA HCM1.277 putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS210728 714 + 0.483193
NA HCM1.142c hypothetical protein pHCM1 CDS111279 477 - 0.532495
NA HCM1.141ac hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS111100 144 - 0.402778
NA HCM1.112 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS87979 270 + 0.359259
NA HCM1.181 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS133567 456 + 0.510965
NA HCM1.179c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS132123 273 - 0.406593
NA HCM1.270 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS201913 723 + 0.431535
NA HCM1.130 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS101965 279 + 0.498208
NA HCM1.116a hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS91608 222 + 0.423423
NA HCM1.284c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS215158 282 - 0.524823
NA HCM1.114 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS88319 1128 + 0.407801
NA HCM1.143 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS111903 276 + 0.427536
NA HCM1.116 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS89524 2013 + 0.411823
NA HCM1.135 putative regulatory proteinSubName: Full=Putative regulatory protein; pHCM1 CDS105911 213 + 0.41784
NA HCM1.263c putative pilus assembly proteinSubName: Full=Putative F pilus assembly protein; SubName: Full=Putative pilus-assembly protein; pHCM1 CDS196295 1416 - 0.46822
NA HCM1.03c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS1367 324 - 0.487654
NA HCM1.124 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS99489 270 + 0.444444
NA HCM1.48c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS23333 420 - 0.538095
NA HCM1.128 hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS101295 456 + 0.462719
NA HCM1.38c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS16895 1182 - 0.529611
NA HCM1.257c puatative periplasmic proteinSubName: Full=Puatative periplasmic protein; pHCM1 CDS189558 393 - 0.516539
NA HCM1.127 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS100742 537 + 0.500931
NA HCM1.89c putative lipoproteinSubName: Full=Putative lipoprotein; pHCM1 CDS59571 522 - 0.386973
NA HCM1.180c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS132392 669 - 0.479821
NA HCM1.08 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS4014 330 + 0.466667
NA HCM1.110 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS85842 987 + 0.383992
NA HCM1.196 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS148734 387 + 0.488372
NA HCM1.256c hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pHCM1 CDS189113 423 - 0.482269
NA HCM1.266c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS199358 513 - 0.419103
NA HCM1.102 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS77433 987 + 0.509625
NA HCM1.250c putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS184508 351 - 0.344729
NA HCM1.290c putative stable plasmid inheritance proteinSubName: Full=Putative stable plasmid inheritance protein; pHCM1 CDS217566 159 - 0.490566
NA HCM1.108 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pHCM1 CDS84470 876 + 0.366438
NA HCM1.53 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS27936 141 + 0.468085
NA HCM1.56ac hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS34003 177 - 0.474576
NA HCM1.88c putative periplasmic proteinSubName: Full=Putative periplasmic protein; SubName: Full=Uncharacterized protein; pHCM1 CDS59182 393 - 0.396947
NA HCM1.01c hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS218131 558 - 0.537634
NA HCM1.62c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS40298 201 - 0.39801
NA HCM1.25c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS7995 354 - 0.488701
NA HCM1.90c putative periplasmic proteinSubName: Full=Putative periplasmic protein; SubName: Full=Putative surface exclusion protein; SubName: Full=Uncharacterized protein; pHCM1 CDS60085 840 - 0.403571
NA HCM1.184c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS135657 204 - 0.480392
NA HCM1.50 putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS26475 603 + 0.515755
NA HCM1.31c hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS11016 465 - 0.412903
NA HCM1.203 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS152712 807 + 0.313507
NA HCM1.42 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS19772 777 + 0.508366
NA HCM1.221 putative replication proteinSubName: Full=Putative replication protein; pHCM1 CDS164829 852 + 0.660798
NA HCM1.192 hypothetical proteinSubName: Full=Putative membrane protein; pHCM1 CDS141795 300 + 0.356667
NA HCM1.104c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS80458 255 - 0.537255
NA HCM1.24c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS7598 321 - 0.439252
NA HCM1.275 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pHCM1 CDS208855 663 + 0.410256
NA HCM1.55ac hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS30447 204 - 0.504902
NA HCM1.288N hypothetical protein pHCM1 CDS217128 267 + 0.501873
NA HCM1.255 putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Uncharacterized protein; pHCM1 CDS188443 612 + 0.488562
NA HCM1.13c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS4604 225 - 0.466667
NA HCM1.106c putative lipoproteinSubName: Full=Putative lipoprotein; SubName: Full=Uncharacterized protein; pHCM1 CDS81234 873 - 0.457045
NA HCM1.74 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS48909 513 + 0.395712
NA HCM1.186c hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS137218 171 - 0.444444
NA HCM1.195 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS144632 3336 + 0.51229
NA HCM1.72 hypothetical proteinSubName: Full=Putative membrane protein; SubName: Full=Uncharacterized protein; pHCM1 CDS47112 441 + 0.401361
NA HCM1.55c putative periplasmic proteinSubName: Full=Putative periplasmic protein; pHCM1 CDS29935 498 - 0.445783
NA HCM1.273 hypothetical proteinSubName: Full=Uncharacterized protein; pHCM1 CDS207762 1107 + 0.471545
htdF HCM1.95 putative periplasmic proteinSubName: Full=HtdF; SubName: Full=Putative H transfer determinant; SubName: Full=Putative periplasmic protein; pHCM1 CDS65008 435 + 0.4
htdK HCM1.96 hypothetical proteinSubName: Full=HtdK; SubName: Full=Putative H transfer determinant; SubName: Full=Uncharacterized protein; pHCM1 CDS65439 564 + 0.45922
merT HCM1.234c putative mercuric transport proteinRecName: Full=Mercuric transport protein; AltName: Full=Mercury ion transport protein; pHCM1 CDS174468 351 - 0.612536
merT HCM1.152 putative mercuric transport proteinSubName: Full=Putative mercuric transport protein; pHCM1 CDS115058 366 + 0.612022
repA HCM1.54 replication initiation proteinSubName: Full=Replication initiation protein; SubName: Full=Replication protein; pHCM1 CDS28468 882 + 0.460317
repA2 HCM1.64 replication initiation proteinSubName: Full=RepHI1A; SubName: Full=Replication initiation protein; pHCM1 CDS42127 876 + 0.43379
trhA HCM1.67 putative pilin precursorSubName: Full=Putative pilin; pHCM1 CDS44356 354 + 0.451977
trhB HCM1.73 putative plasmid transfer proteinSubName: Full=Putative plasmid transfer protein; SubName: Full=Putative transfer protein; pHCM1 CDS47542 1359 + 0.468727
trhE HCM1.70 putative pilus assembly proteinSubName: Full=Putative pilus assembly protein; SubName: Full=TrhE; pHCM1 CDS45078 798 + 0.389724
trhL HCM1.69 putative plasmid transfer proteinSubName: Full=Putative plasmid transfer protein; SubName: Full=TrhL; pHCM1 CDS44728 351 + 0.404558
trhU HCM1.100 plasmid transfer proteinSubName: Full=Plasmid transfer protein; SubName: Full=TrhU; pHCM1 CDS72891 1008 + 0.487103
trhV HCM1.76 putative plasmid transfer proteinSubName: Full=Putative plasmid transfer protein; SubName: Full=Putative transfer protein; SubName: Full=TrhV; pHCM1 CDS50289 951 + 0.475289
trhW HCM1.99 plasmid transfer proteinSubName: Full=Plasmid transfer protein; pHCM1 CDS71193 1509 + 0.484427