TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-06-26 01:23:17

Gene list

Applied filters:

COG category: Unclassified
Genomic element: pCD1

Number of genes found: 30

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA YPCD1.92 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS66503 330 + 0.281818
NA YPCD1.22c hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS14020 390 - 0.276923
NA YPCD1.07 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS4261 297 + 0.373737
NA YPCD1.73c hypothetical proteinSubName: Full=Hypothetial protein; SubName: Full=Uncharacterized protein; pCD1 CDS53679 450 - 0.451111
NA YPCD1.23 hypothetical proteinSubName: Full=Uncharacterized protein; pCD1 CDS14681 420 + 0.388095
NA YPCD1.91n hypothetical protein pCD1 CDS65900 465 + 0.301075
lcrE YPCD1.39c secretion control proteinRecName: Full=Outer membrane protein YopN; AltName: Full=LcrE; AltName: Full=Yop4b; pCD1 CDS27107 882 - 0.461451
lcrR YPCD1.33c low calcium response protein RRecName: Full=Low calcium response locus protein R; pCD1 CDS23246 441 - 0.487528
lcrV YPCD1.31c secreted effector proteinRecName: Full=Virulence-associated V antigen; AltName: Full=Low calcium response locus protein V; pCD1 CDS21935 981 - 0.377166
repA1 YPCD1.77c replication proteinSubName: Full=Putative replication initiation protein; SubName: Full=Replication protein; SubName: Full=Replication protein RepA-like protein; pCD1 CDS56291 867 - 0.542099
sycH YPCD1.95c secretion chaperoneSubName: Full=Putative yopH targeting protein; SubName: Full=Putative yopH targeting protein SycH; SubName: Full=YopH chaperone; SubName: Full=YopH chaperone SycH protein homolog; pCD1 CDS68179 426 - 0.41784
sycN YPCD1.37c hypothetical proteinRecName: Full=Chaperone protein SycN; pCD1 CDS26490 372 - 0.526882
sycT YPCD1.21 YopT chaperoneRecName: Full=Chaperone protein SycT; pCD1 CDS13578 399 + 0.411028
tap YPCD1.78c repA translation proteinSubName: Full=Putative repA translation protein; SubName: Full=RepA translation protein; pCD1 CDS57150 75 - 0.44
tyeA YPCD1.38c Yop secretion and targeting control proteinRecName: Full=Protein TyeA; pCD1 CDS26848 279 - 0.433692
virG YPCD1.48 needle complex outer membrane lipoprotein precursorSubName: Full=Pre-lipoprotein VirG homolog; SubName: Full=Putative Yop targeting lipoprotein; SubName: Full=Putative Yop targeting lipoprotein VirG; SubName: Full=YscC lipoprotein chaperone; pCD1 CDS35593 396 + 0.444444
yerA YPCD1.05c secretion chaperoneRecName: Full=YopE regulator; pCD1 CDS3014 393 - 0.409669
yopE YPCD1.06 putative outer membrane virulence proteinRecName: Full=Outer membrane virulence protein YopE; pCD1 CDS3600 660 + 0.510606
yopH YPCD1.67c putative secreted protein-tyrosine phosphataseSubName: Full=Targeted effector protein; SubName: Full=Type III secretion injected virulence protein; SubName: Full=Uncharacterized protein; SubName: Full=YopH; pCD1 CDS47122 1407 - 0.474058
yopJ YPCD1.71c targeted effector proteinSubName: Full=Putative targeted effector protein; pCD1 CDS50211 867 - 0.344867
yopQ YPCD1.19c Yop targeting proteinSubName: Full=Putative virulence determinant protein; SubName: Full=Type III secretion negative modulator of injection; SubName: Full=Yop targeting protein; SubName: Full=YopK (YopQ) homolog; pCD1 CDS11562 549 - 0.335155
yopT YPCD1.20 Yop targeted effectorRecName: Full=Cysteine protease YopT; EC=3.4.22.-; pCD1 CDS12610 969 + 0.431373
yscA YPCD1.50 hypothetical proteinRecName: Full=Yop proteins translocation protein A; pCD1 CDS37006 99 + 0.313131
yscE YPCD1.54 type III secretion apparatus componentSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscE; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein E homolog; pCD1 CDS40825 201 + 0.422886
yscF YPCD1.55 needle complex major subunitSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscF; SubName: Full=Type III secretion cytoplasmic protein; SubName: Full=Type III secretion protein; SubName: Full=Yop proteins translocation protein F homolog; pCD1 CDS41026 264 + 0.416667
yscG YPCD1.56 type III secretion apparatus componentSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscG; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein G homolog; pCD1 CDS41291 348 + 0.439655
yscK YPCD1.60 type III secretion apparatus componentRecName: Full=Yop proteins translocation protein K; AltName: Full=Low calcium response locus protein KB; pCD1 CDS43221 630 + 0.485714
yscO YPCD1.41 type III secretion apparatus componentSubName: Full=Putative type III secretion protein; SubName: Full=Putative type III secretion protein YscO; SubName: Full=Type III secretion protein; SubName: Full=Type III secretion spans bacterial envelope protein; SubName: Full=Yop proteins translocation protein O; SubName: Full=YscO; pCD1 CDS29502 465 + 0.458065
yscP YPCD1.42 type III secretion apparatus componentRecName: Full=Yop proteins translocation protein P; pCD1 CDS29966 1368 + 0.486842
yscX YPCD1.36c hypothetical proteinRecName: Full=Yop proteins translocation protein X; pCD1 CDS26125 369 - 0.495935