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Gene list

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COG category: Intracellular trafficking and secretion
Gene type: CDS
Genomic element: pSS_046

Number of genes found: 11

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# Shigella sonnei Ss046, Ss046

>SSO_P144 adhesion protein, fragment
MLPPNIRGYAPQITGIAETNARVVVSQQGRVIYDSTVPAGTFSIQDLSSS
VRGILDVEIFEQNGKRKHFQVEMCRCAFLIQTWSE
>SSO_P143 icsA/virG, IcsA/VirG
MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLLLGGPIA
FAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSH
ASRTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGM
ILGGNGGSGADHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNG
GDAVTGVNLPIINKGTISGGNGGNNYGEGDGGNGGDAITGSSLSVINKGT
FAGGNGGAAYGYGYDGYGGNAITGDNLSIINNGAILGGNGGHWGDAINGS
NMTIANSGYIISGKEDDGTQNVVGNAIHITGGNNSLILHEGSVITGDVQV
NNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVSGDVSFGEN
SSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKE
NAELTVSTILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNIN
AGILKMGTVEAMTRTAGVIVNKGATLNFSGMNQTVNTLLNSGTVLINNIN
APFLPDPVIVTGNMTLEKNGHVILNNSSSNVGQTYVQKGNWHGKGGILSL
GAVLGNDNSKTDRLEIAGHASGITYVAVTNEGGSGDKTLEGVQIISTDSS
DKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMDNQESKQMSNQ
ESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSPSL
YDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQI
GGDILKTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGL
YSSWFQNEKERTGLYMDAWLQYGWFNNTVKGDGLTGEKYSSKGITGALEA
GYIYPTIRWTAHNNIDNALYLNPQVQITRHGVKANDYIEHNGTMVTSSGV
NNIQAKLGLRTSLISQSCIDKETLRKFEPFLEVNWKWSSKQYGVIMNGMS
NHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNSYRDTQGILGVKY
TF
>SSO_P109 mxiA, MxiA
MKVIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLNIVLA
ILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKI
ITTFGQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGM
PGKQMSIDADLKAGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAI
AGIIIIFVNLIGGISVGMSQHGMSLSGALSTYTILTIGDGLVSQIPALLI
SISAGFIVTRVNGDSDNMGRNIMSQIFGNPFVLIVTSALALAIGMLPGFP
FFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYTGTFDIDNSHDSSLA
MIENLDAISSETVPLILLFAENKINANDMEGLIERIRSQFFIDYGVRLPT
ILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVV
STSYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIF
GIQETKNMLDQFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLK
LIMESLALWAPREKDVITLVEHVRASLSRYICSKIAVSGEIKVVMLSGYI
EDAIRKGIRQTSGGSFLNMDIEVSDEVMETLAHALRELRNAKKNFVLLVS
VDIRRFVKRLIDNRFKSILVISYAEIDEAYTINVLKTI
>SSO_P107 mxiD, MxiD
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFE
RFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKLTLLVGLIWYKDGN
ALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTF
YISGPPALVELVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNM
RGEDIVIPGVATVVERLLNNGKALSNRQAQNDPMPPFNITQKVSEDSNDF
SFSSVTNSSILEDVSLIAYPETNSILVKGNDQQIQIIRDIITQLDVAKRH
IELSLWIIDIDKSELNNLGVNWQGTASFGDSFGASFNMSSSASISTLDGN
KFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSS
LEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFK
YKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSE
TTLLEDEKSLVSYLNY
>SSO_P101 mxiJ, MxiJ
MIRYKGFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHNITARKV
DGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPR
AEKARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVI
AIYDSPKESELLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPV
KEIKSEFLTNEVIYLFLGMAVLVVILLVWAFKTGWFKRNKI
>SSO_P115 spa24, Spa24
MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNM
TLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLMEYK
QYLKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDA
FKIGFYLYLPFVVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGW
GILSKALIEQYINVPA
>SSO_P116 spa29, Spa29
MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIRIPVIFL
VASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVG
SIIDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILES
IQLSYNICPLFSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLL
GVLSRFAPQMNAFSVSLTIKSLLAIFIIFICSSTIYFSKVQFFLGEHKFF
TNLFVR
>SSO_P114 spa33, Spa33
MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLTSVCGDW
VIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKI
TFRITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEF
CLGSSNVRLATLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKI
NLSESNGESEHTEVSLALFNYDDINVKVDFILLEKNMTINELKMYVENEL
FKFPDDIVKHVNIKVNGSLVGHGELVSIEDGYGIEISSWMVKE
>SSO_P117 spa40, Spa40
MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDV
MLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQT
KFVLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYF
FWINDRKIIFSQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIE
FILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEILSEQTKSDIRN
SKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPT
VRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVWLEQVENTH
>SSO_P111 spa47, Spa47
MSYTKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNEIVARAQ
VVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLG
EVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCG
EGQRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYL
KNSEKKNRCVLVYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDS
LTRYARALRDVALAAGESPARRGYPVSVFDSLPRLLERPGKLKAGGSITA
FYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLAQKGQFPAIDSLKSISR
VFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGENASQDKIYNK
ISVVESFLKQDYRLGFTYEQTMELIGETIR
>SSO_P190 traD, TraD protein
MFSQIANIMLYCLFIFFWILVGLVLWVKISWQTFVNGCIYWWCTTLEGMR
DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLATVVAL
VICLITFFVVSWILGRQGKQQSENEVTGGRQLTDNPKDVARMLKKDGRDS
DIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD
RSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPM
GTKEDPFWQGSGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTYL
RNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIEHNGEPFTIRDWM
RGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV
WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAA
TLFDVMNTRAFFRSPSHKIAEFAVGEIGEKEHLKASEQYSYGADPVRDGV
STGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSLKYQERPKVAP
EFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDVPEVVSGEDVTQAE
QPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPQQPVSPVINDKK
SDSGVNVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYEAWQQE
NHPDTWQQMQRREEVNINVHRERGEDVEPGDDF