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# Shigella flexneri 5 str. 8401, 8401

>SFV_0816 hypothetical protein
MVKKPQQGTIFAAAQRSDSYFVKCINMLSLYEKIKIRLIILFLLAALSFI
GLFFMINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYL
LKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQE
QVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKC
ISFTLRINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHE
IIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIAKTSAVPNNALFEIYFYY
PGGNLLNASDKLFYLPFAFIIIVLLVVYFMTTRVFRRQFSEMTELVNTLA
FLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYD
QESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLC
QRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRN
LRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEI
EENIWIARNIRHAMEIGELFLVYQPIVDINTRAILSAEALCRWVSAERGI
ISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDSLLHINV
SPWQLNETDFHERFTTIMKENGLKANSLCVEITESVIERINEHFYLNIEQ
LRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVR
IIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWD
KSGKLVKE
>SFV_1817 hypothetical protein
MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQLRTGPY
SVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEP
VIIFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRD
GQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGH
KPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDITEQKRLEEQLE
HAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND
LYGHSKGDEVLCALARPLESCARKGDLVFRWGGEEFVLLLPRTPLDTALS
LAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAK
NDGRNRVLAA
>SFV_1414 hypothetical protein
MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFA
NHAVEELDKVLLPLQAGSKVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIG
LVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLI
QWTPAAGSSNAGVIEMINIDLLTAMLLEPQLPQISSASLTVDKRHLLYGN
GLVDSLPQPEDNENYQVSSQSFPFTINVNGPGATALAWHYLPTQLPLAVL
LSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV
EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTHYVMAETIRQHHVFPMS
SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVD
YRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSD
AVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQ
PMPLRDFPKWLAGSQPPPARHNGHITPIMSLR
>SFV_2438 putative sensor protein
MYIRLDKPENPQSTALALDIANKTLPLFRHVNSESLRKVCEIIRDDIHAD
AVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAH
RTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIIST
QLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR
QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIY
DIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA
VRDTGHGIVPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEP
GTEIAFYIPNQRTPVASQATLLL
>SFV_0270 putative prophage repressor CI
MSISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELA
SALGVSVDWLLNGTSDSNVRFVGHVEPKGKYPLISMVRAGSWCEACEPYD
IKDIDEWYDSDVNLLGDGFWLKVEGDSMTSPVGQSIPEGHMVLVDTGREP
VNGSLVVAKLTDANEATFKKLVIDGGQKYLKGLNPSWPMTPINGNCKIIG
VVVEARVKFV
>SFV_1998 hypothetical protein
MQYNVDKLIFLRNGMREALVAPLDFTSLRNAVTEFEQHRDEHAWQIELNR
RRTLPVNGVSDALVSEGNFLSRENESLDNEITAALEVGYLLRLAHNSSSM
VEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRA
VRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNA
IDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRG
GIRMDSRYVSWERLDHFDGVLARVHTLSEGVRGDFGSISIALTLLWALFT
TMLLLSWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLA
KLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQ
DVAGRVGGEEFCVILPGANLTQAAEVAERIRLKLNEKEMLIAKSTTIRIS
ASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA
>SFV_3493 hypothetical protein
MNNVLLMRPDDSEFMIPDDWSGLNAKGITYEQDNRVTESFLPFKSFYCSP
VCTTVELISQNNCFAMGIRYLLEKKRDLRLNHFKAFSHKCETKPDVLIMT
GCTVADTYSIFSRIVEENIMKTMTPIVIITGHHSEDLCSLASKLGGVKII
SPTEKIAKIENAINDAFNSKPKKIRFLTDILSPQQIETMKMVAQGRSVNE
ISAAMNISIKTVYAHKVRAINKLGIKKKVYEALFYKALIQFN
>SFV_1733 hypothetical protein
MEMYFKRMKDEWTGLVEQADPLIRAKAAEIALAHAHYLSIEFYRIVRIDP
HAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHAR
IGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEV
MTRAFTFSDSSASKEDENYRIFSLLENGEEEKERQIASILSWEIDIIYKV
LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFN
QTMRNTRILNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL
TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD
EILRKVSFLSQKRLVKSKILGAGSSRKLAVS
>SFV_0817 hypothetical protein
MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVA
NIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLIS
SDECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHN
RSLIFLLGLERFSLLSKSLVMDSENLMFSLFKNGKPVTGDEYNAKNAIFT
VSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVAVILGASCLYL
VRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL
TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKV
VKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSI
NLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ
>SFV_1581 hypothetical protein
MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIGAELRLVHELSLFWPL
NGVMAGVFARYVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMM
FIVTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSI
DSLDFWPLLADWFSEQFSTSVLIVPCMLTLAIPGVLPRFKAEQMMPAIAF
IVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLG
ANSVIDISVGSPFSIPEMFSARLGIATMAICPIMVSFSVAAINLLMKQVA
LRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYG
HECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAE
KIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
LYRSKKDGRNRTSTMRYGEEVV
>SFV_1517 hypothetical protein
MKIFLENLYHSDCYFLPIRDNQQLLVGVELITHFSSEDGTVRIPTSRVIA
QLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLDRDNY
AGELLKYPFIELLINENYPHLNEGKDNRDLLSLSQMYPLVLGNLGAGNST
MKAVFDGLFTRVMLEKGFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGG
IDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR
>SFV_3419 probable growth inhibitor, PemK-like, autoregulated
MVKARTPHRGEIWYFNPDPVAGHELQGPHYCIVVTDKKLNNVLKVAMCCP
ISTGANAARSTGVTVNVLPRDTQTGNLHGVVLCHQLKAVDLIARGAKFHT
VADEKLISEVISKLVNLIDPQ
>SFV_3492 hypothetical protein
MERRCFFIINDAIIFDPNKCSLSNVNTQDEINLPATAGCILAVLLESNGG
AVDRNSIIDSVLERFSFDLSNNTLNQYISLLRKSFKNIGVEENVILTIPK
VGFYISENITISKQSYDDSHLQEDVVEKVERKRSIPLFRILISLVVVIVI
IEMFAVAFKDTYSITDYPLVKSGKIDTCDLYLSENLNEIGLAKSQIEAAE
ISKKHLPCVPGANFIYDVNSMHYLLGEGQRYLSRCIKSSNDETYAICSEV
LLYD
>SFV_1397 hypothetical protein
MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNWAGFYLL
EDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIAC
DAASNSEIVLPLVVKNQIIGVLDIDSTVFARFTDEDEQGLRQLVAQLEKV
LATTDYKKFFASVAG
>SFV_2408 hypothetical protein
MQVFIMRHGDAALDSASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLV
SPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGV
ASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQM
SPCNLKMAKAI
>SFV_1037 hypothetical protein
MVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLT
GDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKV
VVRDVVSFCESP
>SFV_2439 putative 2-component transcriptional regulator
MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAI
FLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYIL
KPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVT
PINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFC
VNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL
>SFV_1734 putative enzyme
MNLSALHFRSNQLPNQVSDAMQAWGIDGHQLTVEITESMMMEHDTEIFKR
IQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRI
LALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLP
AEEIPGWMSSVLPLKI
>SFV_0043 apaH, diadenosine tetraphosphatase
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLR
YVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLN
WLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPF
FLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESP
EEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWG
GSLTCLRWEDKQYFVQPSNRHKDLGEAAAS
>SFV_4435 arcA, Aerobic respiration control protein arcA
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINL
VIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDY
ITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRS
LIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRT
VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
>SFV_3240 arcB, aerobic respiration sensor-response protein
MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQV
ESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRER
DLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQL
EQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKP
ADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYY
DRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG
IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQ
LDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLR
QILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT
LTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGN
SVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL
PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEE
STVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVL
ESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNV
GEWIEEMKEEWRHDVEVLKAWVAKATKK
>SFV_0848 artI, arginine 3rd transport system periplasmic binding protein
MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDL
AQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLF
TTPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITT
VPYDSYQNAKLDLQNGRIDSVFGDTAVVTEWLKDNPKLAAVGDKVTDKDY
FGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKWFQK
>SFV_2140 baeR, transcriptional response regulatory protein
MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLAYV
RQTPPDLILLDLMLPGTDGLTLCREIRRFSDVPIVMVTAKIEEIDRLLGL
EIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRF
QASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRT
IDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV
>SFV_2139 baeS, sensor protein (for BaeR)
MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQR
LQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPP
HGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVER
LTRNTDINFDKQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGT
HKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQMRRDFMADISH
ELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM
SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGD
RDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDD
QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
VSITVELPLERDLQREV
>SFV_2671 barA, sensor-regulator
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIE
PLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSN
FHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDA
KNSQNMLGYIALELDLKSVRLQQYKEIFISCVMMLFCIGIALIFGWRLMR
DVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAY
HEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM
SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLD
FSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD
NVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDI
SFHSQPNRGSTFWFHINLDLNPNIIIEGPSIQCLAGKRLAYVEPNSAAAQ
CTLDILSETPLEVVYSSTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA
KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFC
HHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSG
HQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQRQTPVIAVTAH
AMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVN
EIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQQVG
ENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL
ELLDEMDNVAREASKILG
>SFV_4117 basR, Transcriptional Regulatory protein basR/pmrA
MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEDGHYSLVVL
DLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLV
KPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELIL
TPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDK
VGKARIRTVRGFGYMLVANEEN
>SFV_4118 basS, sensor protein for basR
MRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRD
NRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQK
ELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADV
AHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAG
QSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGD
ATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK
CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAW
VRLKKDQNVANQI
>SFV_4399 bglJ, 2-component transcriptional regulator
MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA
MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIVDDDIEAR
LIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS
RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD
AGLLEAADILLCMRHCEASNVLHPY
>SFV_1934 cheA, Chemotaxis protein cheA
MSIDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSI
KGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE
QLDAYKQSQEPDAASYDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQ
DEQSRSQLPRRIILSRLKAGEVDLLEEELGHLTTLNDVVKGADSLSAILP
GDIAEDDITAVLCFVIEADQITFETVEVSPKIATPPVLKLAAEQAPTGRV
EREKTTRSSESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH
GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ
VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV
GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTT
IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER
VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI
GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA
NTAA
>SFV_1929 cheB, chemotaxis-specific methylesterase
MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNP
DVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELG
AIDFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAG
PLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFA
DRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELARSGANYQIKIHDG
PAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW
TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLATISAGQAIRI
>SFV_1930 cheR, Chemotaxis protein methyltransferase
MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMV
YNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREA
HHFPLLADHARRRSGEDRVWSAVASTGEEPYSIAMTLADTLGTVPGRWKV
FASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQ
ELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVP
LLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD
>SFV_1933 cheW, positive regulator of CheA protein activity
MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIAN
TPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGI
VVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKL
LNSEEMALLDSAASEVA
>SFV_1928 cheY, Chemotaxis protein cheY
MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG
YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQ
AGASGYVVKPFTAATLEEKLNKIFEKLGM
>SFV_1927 cheZ, Chemotaxis protein cheZ
MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPD
ARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFAD
PIDLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIK
RMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVA
SQDQVDDLLDSLGF
>SFV_3582 cpxA, two-component sensor protein
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIE
QHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERS
EMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPAS
SSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEV
AQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHEL
RTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK
NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNAL
ESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIF
RPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
LPLYKRS
>SFV_3581 cpxR, transcriptional regulator in 2-component system
MEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQT
PVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSE
QQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHL
GQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLR
GRGYLMVSAS
>SFV_4432 creB, catabolic regulation response regulator
MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDV
MILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADD
YVAKPFSPREVCARVRTLLRRVKKFSTPSPVIRIGHFELNEPAAQISWFD
TPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDIHIK
TLRAKLRAINPDLSPINTHRGMGYSLRGL
>SFV_3363 crp, cyclic AMP receptor protein
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAV
LIKDEEGKEMILSYLSQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY
KKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLN
LAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAH
GKTIVVYGTR
>SFV_2809 csrA, carbon storage regulator
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQR
IQAEKSQQSSY
>SFV_0546 cstA, carbon starvation protein
MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYR
FYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAG
PLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGEL
VKEEMGPTAGVIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTI
PLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFD
FTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI
MRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTT
PKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVL
APAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQD
LLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQSVVDPLGGINTLWPL
FGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTADWQK
AFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTI
FFMVVVVVLALFSIKTALAALKDPKPTAKETPYEPMPENVEEIVAQAKGA
H
>SFV_0130 dksA, dnaK suppressor protein
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQ
LRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE
KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA
G
>SFV_3409 envZ, osmolarity sensor protein
MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVL
AYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLR
WAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLT
EIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGI
IPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLT
RIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD
LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAAR
YGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS
GTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
>SFV_2428 evgA, putative positive transcription regulator
MNAIIIDDHPLAIAAIRNLLIKNDIEILTELTESGSAVQRVETLKPDIVI
IDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFV
SKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEIS
VMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
NKIG
>SFV_2429 evgS, putative sensor for regulator EvgA
MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRLSNKELR
WLASKKNLVIAVHKSQTATLLHTDSQQQVRGINADYLNLLKRALNIKLTL
REYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVT
TLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALAS
VSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESV
ILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQ
HPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSH
NIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDS
EQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELD
ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIIN
KALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSS
LLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVIS
HNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYT
QVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINALEV
EKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEA
ISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFG
AIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVK
ITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGS
GLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAE
QPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSM
QHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLS
CGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQ
LMQEILMTFQHETHKDLPAAFHALEAGDNRTFHQCIHRIHGAANILNLQK
LINISHQLEITPASDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND
>SFV_2772 fhlA, Formate hydrogenlyase transcriptional activator
MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIV
LWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEE
FCETWPQLAAGGLYPKFGHYCLMPLAAGGHIFGGCEFIRYDERPWSEKEF
NRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSR
LDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAH
EQSEVDEAGTLTERVFKSKEMLLINLYERDDLAPYERMLFDTWGNQIQTL
CLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAY
QEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQ
SDSTVLILGETGSGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQ
EFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLP
PLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRE
LENVIERAVLLTRGNVLQLSLPDIALPEPETPPAATVVAQEGEDEYQLIV
RVLKETNSVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI
>SFV_0497 fimZ, fimbrial Z protein
MYQSTIYRPNGKLSAPMRLVTMKPTSVIIMDTHPIIRMSIEVLLQKNSEL
QIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVK
VLFLLSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPS
ETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNK
TVSAHKSNIYGKLGLHSIVELIRLAP
>SFV_1964 fliY, putative periplasmic binding transport protein
MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGT
YPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKR
IDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGK
KVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLA
ALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDG
TLQALSEKWFGADVTK
>SFV_1825 fnr, Fumarate and nitrate reduction Regulatory protein
MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKK
PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG
FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE
IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI
GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA
>SFV_3595 frvA, PTS system, fructose-specific IIA component
MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREK
MHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICL
GVPQSGEEDQVKIIGTLCRKIIHQEFIHQLQQGDTDQVLALLNQTLSS
>SFV_3093 glnE, adenylylating enzyme for glutamine synthetase
MNISVMRQTIRNRSGCTAENVNQARIKSLMKPLSSPLQQYWQTVVERLPE
LLAEESLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQPPQADEWQHYSV
WLQEALSNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLSY
LAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFS
SDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYR
VDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVY
ANELRAMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAG
GIREIEFIVQVFQLIRGGREPLLQSRSLLPTLSAIAALHLLSENDAEQLR
VAYLFLRRLENLLQSINDEQTQTLPSDELNRARLAWAMDFADWPQLTGAL
TAHMTNVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAH
LSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDA
AVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIASQLAR
YPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFK
QAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWGQMVARYGK
PNHLNEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGERE
IDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAF
ADYQKNEAWTWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQ
TEVREMREKMRAHLGNKHRNRFDIKADEGGITDIEFITQYLVLRYAHEKP
KLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPG
HVSEDCFTAERDLVRASWQKWLVEE
>SFV_3633 glnG, Nitrogen regulation protein NR(I)
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDV
LLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFD
YLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAQAMQDV
FRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRTKAPFIALNMAAI
PKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQT
RLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR
LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTR
LAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
LLGWGRNTLTRKLKELGME
>SFV_0795 glnH, periplasmic glutamine-binding protein
MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFD
VDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKA
IDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANI
KTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGD
SLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFSTEPK
>SFV_3632 glnL, Nitrogen regulation protein NR(II)
MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGT
PLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMP
DGMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRG
AAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIH
KVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNAL
QALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL
FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK
>SFV_2376 hisJ, histidine-binding periplasmic protein of high-affinity histidine transport system
MKKLVLSLSLVLAFSSATAALAAIPQNIRIGTDPTYAPFESKNSQGELVG
FDIELAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQ
QEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNE
HWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY
KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAK
KYFDFDVYGG
>SFV_1248 hnr, Hnr protein
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGF
TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRL
GVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNP
AAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAF
YCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNH
LLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP
LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
>SFV_4075 hydH, sensor kinase for HydG
MQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLLEKG
SVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTIV
MHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPM
FAAGMHRMRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALAT
VLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPL
SSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHL
ALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQV
LLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKGIAADQLEAIFT
PYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVNITR
KDPQG
>SFV_2536 hyfR, putative 2-component regulator, interaction with sigma 54
MLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLKSNFYYRYHDDGS
DVTATTEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTPQDCTLFNW
LARIITPVLQSWLNDEAQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDD
LIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPHNM
PGDSVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPL
TFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADACRRMTD
LQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDLLQQVDIVAKSDSTVL
ICGETGTGKEVIARAIHQLSPRHDKPLVKINCAAIPASLLESELFGHDKG
AFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLG
GSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRP
EDIPLLAKHFTQKMARHMNRSIDAIPTEALRQLMSWDWPGNVRELENVIE
RAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEE
ERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL
>SFV_4170 lexA, regulator for SOS(lexA) regulon
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL
ARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQV
DPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID
DEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGD
WL
>SFV_1237 narL, Nitrate/nitrite response regulator protein narL
MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES
LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALK
RGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTE
RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL
KSRVEAAVWVHQERIF
>SFV_2269 narP, nitrate/nitrite response regulator
MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGEGASAIDLANR
LDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALID
AGADGYLLKDSDPEVLLEAIRTGAKGSKVFSERVNQYLREREMFGAEEDP
FSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS
RVAATILFLQQRGAQ
>SFV_1238 narX, nitrate/nitrate sensor, histidine protein kinase
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKA
GSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQ
GLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIE
TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQR
ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSF
LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF
TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ
GRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD
SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT
TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL
QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH
YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
>SFV_4140 nrfB, Cytochrome c-type protein nrfB precursor
MSVLRSLLTAGVLASGLLWSLNGITATPAVQASGDRYEVTQQRNPDAACL
DCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQASPQHREGVKDVMRFN
EPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDT
MQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
>SFV_3410 ompR, osmolarity response regulator
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH
LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD
DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTR
EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS
IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
>SFV_0364 phoB, positive response regulator for pho regulon
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLI
LLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGAD
DYITKPFSPKELVARIKAVMRRISPMAVEEVIKMQGLSLNPTSHRVMAGE
EPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIR
RLRKALEPGGHDRMVQTVRGTGYRFSTRF
>SFV_1165 phoP, transcriptional regulatory protein
MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIV
DLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT
KPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKL
TAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKK
IQAQYPQEVITTVRGQGYLFELR
>SFV_1164 phoQ, sensor protein PhoQ
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFR
LLRGESNLFYTLAQWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQR
DVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDD
DDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLS
ANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSL
VRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV
SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSA
LNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEI
SARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
>SFV_0365 phoR, positive and negative sensor protein for pho regulon
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNL
LRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRF
RSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYP
EFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQL
EGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVREKALHTMREQT
QRMEGLVKQLLTLSKIEAAPTQLLNEKVDVPMMLRVVEREAQTLSQKKQT
FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGA
EFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNH
HESRLNIESTVGKGTRFSFVIPERLIAKNSD
>SFV_1398 proQ, Activator of ProP osmoprotectant transporter
MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEM
SLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHAR
KQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKE
GAERKPRAQKPVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNA
MDATVLEITKDGVRVQLNSGMSLIVRAEHLVF
>SFV_1318 pspA, phage shock protein, inner membrane protein
MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARA
LAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDL
IKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSR
DVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAEL
KADDAISEQLAQLKAKMKQDNQ
>SFV_1320 pspC, phage shock protein
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLA
LFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLRE
MERYVTSDTFTLRSRFRQL
>SFV_1317 pspF, psp operon transcriptional activator
MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLH
YLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERAD
GGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNA
DLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCRE
IKLPLFPGFTERSRETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDI
IIDPFKRRPPEEAIAVSENTSLPTLPLDLREFQMQQEKELLQLSLQQGKY
NQKRAAELLGLTYHQFRALLKKHQI
>SFV_3234 ptsN, Nitrogen regulatory IIA protein
MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVV
FEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAID
NQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELY
QIITDTEGTPDEA
>SFV_2907 ptsP, Phosphoenolpyruvate-protein phosphotransferase ptsP
MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCY
YLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIP
SVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQM
AAILSQSQLTALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQA
STLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLS
DTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRV
LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRD
GAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPV
LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
LGSCIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTL
DVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATG
NLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS
MVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRA
LAMIAREAEIHGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVK
YLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGMGGLIRGGL
>SFV_4351 ptxA, putative PTS system enzyme II A component
MKLHDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDA
VEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVD
ILITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRT
NAAA
>SFV_3071 qseB, QseB
MLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDG
RDILREWREKGQREPVLNLTARDALAERVEGLRLGADDYLCKPFALIEVA
ARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLE
LLMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTV
HGIGYTLGEK
>SFV_1994 rcsA, Colanic acid capsular biosynthesis activation protein A
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSV
VFINEDCFIHDASNSQRIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKN
LLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWM
AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN
GIFVNMR
>SFV_2292 rcsB, positive response regulator for colanic capsule biosynthesis
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA
HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLD
LDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR
LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIA
LLNYLSSVTLSPADKD
>SFV_2293 rcsC, Sensor protein rcsC
MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQ
EFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVP
AFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGS
DNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGP
RPCVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDEN
GHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIV
YSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDAL
RLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQ
RLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKEL
PKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMN
HITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKF
TDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRN
FQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKG
VEGLSGKRCCLTVPNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITD
EVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYL
IEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQ
CKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVI
GVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRDS
>SFV_2673 relA, GTP pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHP
DASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVG
KSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVV
IKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELED
YCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVY
GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELG
VAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQD
RDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGD
IRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPE
RIVDAVWGESYSAGYSLVVRVVANDRNGLLRDITTILANEKVNVLGVASR
SDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>SFV_2635 rseA, sigma-E factor, negative regulatory protein
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEV
LHFDISSRVMAAIEEEPVRQSATLIPEAQPAPHQWQKMPFWQKVRPWAAQ
LTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSL
GVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQ
AAVQVPGIQTLGTQSQ
>SFV_2634 rseB, regulates activity of sigma-E factor
MKQLWFAMSLVTGSLLFSANASVTPASGALLQQMNLASQSLNYELSFISI
NKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPF
TLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARD
GTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQT
LAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIE
SRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGEL
PPQTAKRIAENIKFGAAQ
>SFV_2633 rseC, Sigma-E factor Regulatory protein rseC
MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHT
IVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLF
ASDVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRF
ETSSEDASQ
>SFV_1623 rstA, response transcriptional regulatory protein
MIVSKNSAVYCDVFISTVNVMNTIVFVEDDAEVGSLIAAYLAKHDMQVTV
EPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTS
LDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATLTKGLQE
TSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQI
MDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKG
YLFAPHAWDSDNKQSDD
>SFV_3429 rtcR, putative 2-component regulator
MRKTVAFGFVGTVLDYAGRGSQRWSKWRPSLCICQQESLVIDRLELLHDA
RSRSLFETLKRDIASVSPETEVVGVEIELHNPWDFEEVYACLHDFARGYE
FQPEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSTPRKKEQPRG
PGEVTIIDLDLSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQI
EKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSGAFVEVNCATL
RGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYAR
INLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTEARRAWLAF
ATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQ
GKASVNDADRLRKYLARFGLTWEAVQDQHSSS
>SFV_2254 rtn, hypothetical protein
MIAILVSCLQFLVAWHKHEVKYDTLIIDVQKYLDTYFADLKSTTDRLQPL
TLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELI
PALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTP
SLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIP
LTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTA
IKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQ
KMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQ
KLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTG
HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTV
TEGVETPEQARWLSERGVNFMQGYWISHPLPLDDFVRWLKKPYTPQW
>SFV_3879 spoT, guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPV
AVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV
SKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKE
VVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLK
EQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTT
AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL
PAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKL
NEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPP
ATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR
NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTT
TSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRN
RN
>SFV_1477 spy, periplasmic protein
MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDM
MFKDLNLTDAQKQQIHEIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAK
AEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP
AAKGKMPATAE
>SFV_1005 torR, response transcriptional regulator for torA
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLI
LLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYV
TKPLELRELVVRVKNLLWRIDLARQAQPHTQDYCYRFAGYCLNVSRHTLE
RDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVD
VLIRRLRHKLSADLLVTQHGEGYFLAADVC
>SFV_1004 torS, sensor protein torS
MIASSIIRLYARCIPLCDSTFFTLSAPTVNLTLTRRLWMGFALMALLTLT
STLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLTSA
DNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQ
QGELVGRRLQLRQQQRQLSQQIAAADEIARLEQGQANNATTSAGATQAGI
YDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLE
QIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLL
ALFQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELHNQHGLAHLE
KASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLQAITDS
GESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKG
RPIRLATAIADDVPSALMGDPRRIRQVITNLLSNALRFTDEGHIILRSRT
DGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQ
AMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTANQAVRLDGLRLLLIE
DNPLTQRITVEMLNTSGAQVVAIGNAAQALETLQNSEPFAAALVDFDLPD
IDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPRE
VLGQLLAHYLQLQANNDLPLDVSQLNEDAQLMGTEKIHEWLALFKQHALP
LLDEIDIARASQDSEKIKRAAHQLKSSCSSLGMRSASQLCAQLEQQPLSA
PLPHEEITRSVAALEA
>SFV_3840 uhpA, Transcriptional Regulatory protein uhpA
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQV
CICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS
KRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLA
QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
>SFV_3841 uhpB, Sensor protein uhpB
MMKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRL
GLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVAL
ISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGL
TLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL
QLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWR
DHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE
TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ
LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW
RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI
EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRY
V
>SFV_1190 umuD, SOS mutagenesis
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA
TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ
LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
>SFV_3507 uspA, universal stress protein
MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGL
IDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIK
KYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE
>SFV_1958 uvrY, putative 2-component transcriptional regulator
MRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGG
LEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVV
SAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMIT
KGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNA
ETLSSQ
>SFV_3903 waaY, putative LPS biosynthesis protein
MIYNKTINGLKVFIKDNDPFYEQVLNDFLTCRVKTLKVFRSIDDTKVILI
DTARGPLVLKVYAPKHKMTERFLKSCIKKDYYENLIYQTDRVRGEGIQSI
NDYFLLAERKTLNFAHYYIMLIEYIEGVGLNEYLEISEDLKDQLSESIKE
LHQHGMVSGDPHKGNFIVSEKGLRLIDLSGKKTTAVLKAKDRIDLERHYN
IKNELKDFGYTYLIFKKKIKKVIRDVKVKLGLKSK
>SFV_2120 wzb, probable protein-tyrosine-phosphatase
MFNNILVVCVGNICRSPMAERLLQRYHPELKVESAGLGALVGKGADPTAI
SVAAEHQLSLEGHCARQISRRLCRNYDLILTMDKRHIERLCEMAPEMRGK
VMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV
>SFV_0350 yaiC, hypothetical protein
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLA
GMFLPIVSTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY
NLKTDAVLAGMWVGVMGVNVLPSTAMLMILCLNLMGAGGPRLFVAGLVLM
VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVVYPLMFGWVSYQTATKLA
EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID
HFKSINDTWGHDVGDEAIVVLTRQLQITLRGSDVIGRFGGDEFAVIMSGT
PAESAITAMLRVREGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLK
SADLALYKAKKAGRNRTEVAA
>SFV_0503 ybcZ, putative 2-component sensor protein
MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDIND
LKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYH
SPGAPDIREFARDAIPDKDARGGEVYLLSGPTIMMPGHGHGHMEHSNWRM
INLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVF
IVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNH
MIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDV
LYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADKVGKVFDFFE
ALAEDRGVELRFVGDKRQVAGDPLMLRRALSNLLSNALRYTPTRETIVVR
CQTVDHQVQVSVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA
IVKSIVVAHKGTVAVTSDARGTRFVITLPA
>SFV_0561 ybdQ, hypothetical protein
MYKAIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHR
FAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNEL
AEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR
>SFV_0671 ybeJ, putative periplasmic binding transport protein
MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESS
VPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIP
LLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFAD
LKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAV
AFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMD
DTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA
LN
>SFV_0786 ybiI, hypothetical protein
MASAWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGAPIPQAR
REAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
>SFV_0991 yccY, putative phosphatase
MDSNMAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVK
HPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTA
IAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRL
SR
>SFV_1826 ydaA, hypothetical protein
MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTT
LLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAI
IQEVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPW
PEGGKALVAVNLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPV
TPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINENMTHVEKGLP
EEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK
PDQYQTPVELDDEEDD
>SFV_1939 yecG, putative regulator
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLA
APMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHK
HHFNLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD
>SFV_2013 yedV, putative 2-component sensor protein
MKRLSITVRLTLLFIFLQSVAGAGIVWTLYNGLASELKWRDDTTLINRTA
QIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHSDGINKIVNRTNVSDDM
LNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASAR
HNMLEQYKINSIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYN
DSRVPVEVNALPRELKPLGQALNKMHHALVKYFERLSQFADDLAHELRTP
INALLGQNQVTLSQIRSIAEYQKTIAGNIEELENISRLTENILFLARADK
NNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVKCNQQIFADKILLQ
RMLSNLIVNAIRYSPEKSRIHITSFLDANGSLNIDIASPGTKINEPEKLF
RRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLSKHNVFRITLPQ
RN
>SFV_2014 yedW, putative 2-component transcriptional regulator
MSFEDSEKTSRVTLQQHYNFVMNQVVSITYDLWHIIFMKILLIEDNQRTQ
EWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQIL
QTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRA
QLRQHHALNSTLEISGLKMDSVSQSVSRDNISITLTRKEFQLLWLLASRA
GEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRG
MGYSFVAVKK
>SFV_2181 yehT, hypothetical protein
MIKVLIVDDEPLARENLRIFLQEQSDIEIVGECSNAVEGIGAVHKLRPDV
LFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLL
KPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQM
KDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLA
HLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
>SFV_2182 yehU, putative 2-component sensor protein
MCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLH
IDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMIS
TIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIAR
PYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATAL
KVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIG
DDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVI
PLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQ
KAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFF
RKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQL
PAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQP
VTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
>SFV_2238 yeiL, putative transcriptional regulator
MSESAFKDCFSTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLY
ATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKH
YRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ
EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ
LSGLALEMDPENKFSGMMQ
>SFV_2451 yfeA, hypothetical protein
MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLC
VMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCA
CAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFP
LKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILW
RRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFII
FTLGVGNLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS
FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGK
SFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSE
LLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALD
QGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSAR
FDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY
HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYE
RLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVE
TQQQQALLHKLGVQYLQGYLIGRPQPLAD
>SFV_2602 yfhA, putative 2-component transcriptional regulator
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKV
DLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGV
FSFLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQA
RLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQL
LESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLR
VLQERKVRPLGSNRDIDINVRIISATHRDLSKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWP
GNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFVEARNHFEL
NYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE
>SFV_2604 yfhK, putative 2-component sensor protein
MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRT
TLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDA
HAGVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMV
QATRTVVFSRGQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGP
VKNIERMINRLGEGRSLGNSVSFCGPSELRSVGQRILWLSERLSWLESQR
HQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSCN
LQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTD
VDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYID
VINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
ELYLVDESGQDVCFRIELPSSKNTK
>SFV_2866 yfiN, hypothetical protein
MHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDE
MEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTS
ALLFLDGDNFKYINDTWGHATGDRVLIEIAKRLAEFGGLRHKAYRLGGDE
FAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTLSIGYAMTIE
HASAEKLQELADHNMYQAKHQRAEKLVR
>SFV_2796 ygaA, putative 2-component transcriptional regulator
MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQ
FIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDG
LIPGQESLKVHACVGLPLFVGQNLIGALTLDGMQPDQFDVFSDEELRLIA
ALAAGALSNALLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKE
IEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPES
VAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSV
FPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSF
PGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRL
GLKD
>SFV_2817 ygaG, hypothetical protein
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPE
RGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRV
ADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERD
VRINSNEELALPKEKLQELHI
>SFV_3095 ygiM, hypothetical protein
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTV
NAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLEN
QVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIV
AQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKR
KDRWMN
>SFV_3278 yhdA, hypothetical protein
MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAID
THLVSNDFSALRPQITELMVSADIVRVDLLHGDKQVYTLARNGSYRPVGT
SDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIILM
LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALD
TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQE
KVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIASQLIKAVDTLPNNKMLDRDDMIHIG
ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR
TLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRD
TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL
TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTHV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
>SFV_3526 yhiE, hypothetical protein
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHN
HILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLE
ITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ
KFNIMYKLKLRRMSDIVTLGITSYF
>SFV_3568 yhjB, putative regulator
MQIVMFDRQSIFIHGIKISLQQRIPGVSIQGVSQADELWQKLESYPEALV
MLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAI
VPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREIL
TMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS
>SFV_3563 yhjH, hypothetical protein
MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELL
TVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFVEHGL
LASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMC
EFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQ
LLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPMETLNT
AVLAL
>SFV_3559 yhjK, hypothetical protein
MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILK
GDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRL
FELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIY
LLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQ
DDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQV
VARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL
AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSKRLPIERIQLRPHCSIG
VAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEE
SDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLI
DRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNM
VADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVAL
DDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQS
LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
>SFV_3580 yiiO, Uncharacterized periplasmic protein
MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGIS
LTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAE
KMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQ
KSSSLKLLSSSNSRSQ
>SFV_3994 yiiT, putative regulator
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGI
YFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQ
KEQCDLLVCGHHHSFINRLMPAYRRMINKMSADLLIVPFIDK
>SFV_4074 yjaI, hypothetical protein
MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKR
NTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHN
DFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDE
LRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW
>SFV_4151 yjcC, hypothetical protein
MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLAL
DKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYAR
DNHFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQR
GNYVAVINPLFWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLI
HLKDLTVQRNGYLYATIYSTKRPIAAIVATSYQRLITHFYNHLIFALPAG
ILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI
GAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGAYL
ATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFL
DVEKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVE
TLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQG
WFFAKAMPPQVFMQWMEQLPARELTRGQ
>SFV_4106 yjdG, putative 2-component transcriptional regulator
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDAPI
DLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGV
VDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQ
DPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLI
WLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
>SFV_4105 yjdH, putative 2-component sensor protein
MRHSLPYHILRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRD
GLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVV
TDMQSLRYSHPEAQRIGQPFKGDDILNALNGEENVAINRGFLAQALRVFT
PIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCI
LVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDA
AQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL
LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHE
FMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGF
LISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEAL
GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSER
GVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR
>SFV_4373 yjiY, putative carbon starvation protein
MPGFTMDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVS
VYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHF
AAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRN
GASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGV
FTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHDP
YWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVG
LALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHA
LISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAM
NTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPE
QILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGIL
FEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVG
LWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQ
YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTD
LTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKR
TDKETPYVPIPEGGVKISSHH
>SFV_4398 yjjQ, putative regulator
MESLPGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQA
VELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDF
SYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA
IHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
>SFV_0431 ylaB, hypothetical protein
MLVRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRV
AIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYI
DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMG
TAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR
LQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLP
LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK
IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGD
CLRQHPQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTERE
FADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSF
VDALEYKNVTPHIIEMAKTLKLKMVAEGIETSKQEEWLRQHGVHYGQGWL
YSKALPKEDFLRWAEQHL
>SFV_0504 ylcA, putative 2-component transcriptional regulator
MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIIL
DIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLV
KPFAFAELLARVRTLLQRGAAVIIESQFQVADLMVDLVSRKVTRSGTRIT
LTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRG
KIDNDFEPKLIQTVRGVGYMLEVPDGQ
>SFV_1813 ynaF, putative filament protein
MNSVITQKVSSGVTLYADTKTGGFMNRTILVPIDISDSELTQRVISHVEA
EAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEII
KKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLG
SNAAAVVRHAECSVLVVR
>SFV_2291 yojN, putative 2-component sensor protein
MTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDTWRYVTRQIYDNIAAT
TSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTY
LDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDS
RRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAF
DLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEI
SSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFR
HFSSRSTESVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVIS
NKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQ
IFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSLA
ESAAKLNAPESKQLANQADVLVRLVEEIQLANMLADDSWKSETVLFSVQD
LIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYA
VTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQT
QNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADP
EVEEEEERLLDDVCVMVDVTSAEIRNIVTRLLENWGATCITPDERLISQD
YDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQ
LIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAAT
SDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISD
IDSYVKSLL