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# Shigella sonnei Ss046, Ss046

>SSON_1790 hypothetical protein
MTWLFCDRIATKIDKNNGISMITHNFNTLDLLTSPVWIVSPFEEQLIYAN
SAARLLMQDLTFSQLRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRK
EEETALNCRLVLRKLTEAEPVIIFEGIEASATLGLKASRSANYQRKKQGF
YARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN
MLGRRVMPIMHEISHLPGGHKPLNFIHKLADGSTRHVQTYAGPIEIYGDK
LMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLA
IAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFR
WGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHE
GNESIDELFKRVDDALYRAKNDGRNRVLAA
>SSON_1635 putative enzyme
MRQDAEVIMKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAE
KLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQ
LEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAV
DHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPA
DNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLV
MTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVS
LFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGILQIKTSSGA
ETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLK
PDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLT
LSIGISYDVGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERL
VLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPQHGHVPPS
RFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFR
SNQLPNQVSDAMQAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGV
GLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITS
IGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMS
SVLPLKI
>SSON_0871 hypothetical bacteriophage protein
MRTYLSGLTASGYAHPKIIPGAIYLDKNGNRVTVKELMFDRVYFIRDGYS
FHSSLNVEIFISRFRREIPLSRNNHVSCMDVDKKLQELKNMIAAWREQK
>SSON_1345 hypothetical protein
MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRN
LNQQRVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQA
AKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDR
ALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQLPQISSASLT
VDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY
LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL
NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAET
IRQRHVFPMSSQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEI
TERDALLDVDYRIARELHRKNVKLAIDDFGTGNSSFSWLETLRPDMLKID
KSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGV
HILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR
>SSON_0248 hypothetical protein
MPEEKLQTLSLQVINGSELESGRAARCLFTQQGNVGHGPECHWSVQDRQQ
SIPAQAFTVILHDGTFCLRPQTAQLWLNQAKVTATSDLIQLRQGDEIQIG
RLMVRVHLNRGDIPHYDEEMATPETIVTNRDMLTDTLLSTEGAPHYPGMT
HRHQLADTVVNGFSADPLQALQSESLITTGDPLSGIAAVRPSAPLSDPAS
NGGINTPFMDLPPIYASPGDRNDDVSAAEMAQRHVAVTPLLRGLGGSLTM
SNSDDADDFLEEAGRTLQAAIKGLLDLQQQRNSLSDKHLRPLEDNPLRLN
MDYATALDVMFAEGKSPVHLAAPAAVSESLRNVRHHEEANRAAIVESLRV
LLDAFSPQNLLRRFVQYRRSHELRQPLDDAGAWQMYSHYYEELASDRQQG
FEMLFNEVYAQVYDRVLREKQREPEA
>SSON_1606 hypothetical protein
MLADWFSEQFSTGVLIVPLTVMLLDIDYFKSINDNYGHECGDKVLSVFAR
HIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTW
QQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTS
TMRYGEEVV
>SSON_2013 hypothetical protein
MGVVRVQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREV
VVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDF
TSLRNAVTEFEQHRDEHAWQIELNRRRTLSVNGVSDALVSEGNLLSRENE
SLDNEITAALEVGYLLRLAHNTSSMVEQAMYVSRAGFYVSTQPTLFTRNV
PTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVD
SNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPD
HPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVH
TLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQ
WQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAIND
RFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAE
VAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADR
RLYLAKQAGRNRVCASDNA
>SSON_1634 hypothetical protein
MEMYFKRMKDEWTGLVEQADPLIRAKAAEIAVAHAHYLSIEFYRIVRIDP
HAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHAR
IGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEV
MTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKI
LLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFN
QTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL
TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGD
EILRKVSQAFYDNVHSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSR
VEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGR
NRVELWKASL
>SSON_1452 hypothetical protein
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIA
QLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNY
AGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNST
MKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGG
IDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
>SSON_4515 putative inner membrane protein
MLILAIGLPDSKGFLWLANDKNYHMILVIIINERDETMLQRTLGSGWGVL
LPGLLIAGLMYADLSPDQWRIVILMGLVLTPVMLYHKQLRHYVLLPSCLA
LIAAIMLMIMNLNQG
>SSON_2473 putative 2-component transcriptional regulator
MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAI
FLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYIL
KPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVT
PINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFC
VNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL
>SSON_2436 putative endopeptidase
MSRVTAIISALVICIIVCLSLAVNHYRDNAIAYKEQRDNKASELEKANAT
IADMRKRQRDVAELDARYIKELADANATIESLRADVSAGRKRLQVAATCA
KSTTGASGMGDGESPGLTADAELNYYRLRSGIDKITAQVNYLQEYIRTQC
LK
>SSON_2585 putative cytochrome C-type biogenesis protein
MKLNATYIKMRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPL
ALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCW
GGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLA
SRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYY
SQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLL
LPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS
SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYMDPVVHLPNVRALNRALRD
APWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQL
SGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRS
PVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRL
QQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIVPDSFLPVAHE
FGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS
QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGT
GYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRV
VAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA
>SSON_1329 hypothetical protein
MLILIGWQFQVRQTSDYIMNKTEFYADLNRDFNALMAGETSFLATLANTS
ALLYERLTDVNWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVAR
NQVQRIEDVHAFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRF
TDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG
>SSON_2396 hypothetical protein
MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLV
SPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGV
ASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQM
SPCNLKMAKAI
>SSON_3892 putative transposase
MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELLLMQYLD
EGRLVRTDDPYVHLDLEEPSVDSVSFQKREEDYRKILPIINSKDRFDPKV
RSELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDYKNSGAPGERR
SATGTAKIGRAREYGKGEGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAY
RRFVDLFAQYFPRIPQEDYPTLRQFRYFYDREYPKAQRLKSRVKAGVYKK
DVRPLSSTATSQALGPGSRYEIDATIADIYLVDHHDRQKIIGRPTLYIVI
DVFSRMITGFYIGFENPSYVVAMQAFVNACSDKTAICAQHDIEISSSDWP
CVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAKGIVESTFR
TLQAEFKSFAPGIVEGSRIKSHGETDYRLDASLSVFEFTQIILRTILFRN
NHLVMDKYDRDADFPTDLPSIPVQLWQWGMQHRTGSLRAVEQEQLRVALL
PRRKVSISSFGVNLWGLYYSGSEILREGWLQRSTDIARPQHLEAAYDPVL
VDTIYLFPQVGSRVFWRCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAK
QDELTKRRELEAFIQQTIQKANKLTPSTTEPKSTRIKQIKTNKKEAVTSE
RKKRAEHLKPSSSGDEAKVIPFNAVEADDQEDYSLPTYVPELFQDPPEKD
ES
>SSON_3210 aer, aerotaxis sensor receptor, flavoprotein
MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQG
QPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAV
PMVREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRK
GWLGKLPSLPLRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLA
SACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELGLTLRAVGQLG
LMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMN
QMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQR
IGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRS
ANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLED
AVTVLH
>SSON_0057 apaH, diadenosine tetraphosphatase
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLR
YVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLN
WLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPF
FLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESP
EEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWG
GTLTCLRWEDKQYFVQPSNRHKDLGEAAAS
>SSON_4551 arcA, negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINL
VIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDY
ITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRS
LIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRT
VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
>SSON_3358 arcB, histidine protein kinase/phosphatase
MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQV
ESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRER
DLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQL
EQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKP
VDVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYY
DRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG
IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQ
LDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLR
QILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFT
LTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGN
SVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL
PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEE
STVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVL
ESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNV
GEWIEEMKEEWRHDVEVLKAWVAKATKK
>SSON_2368 argT, lysine-, arginine-, ornithine-binding periplasmic protein
MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVG
FDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQ
QEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANE
TWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKAF
AFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAK
KYFDFNVYGD
>SSON_0848 artI, arginine 3rd transport system periplasmic binding protein
MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDL
AQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLF
TTPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITT
VPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDY
FGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKWFQK
>SSON_0845 artJ, arginine 3rd transport system periplasmic binding protein
MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDL
AKALCKQMQAECTFTNHAFDSLIPSLKFRKYDSVISGMDITPERSKQVSF
TTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKT
VSYDSYQNAFIDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQY
FGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQWFPQ
>SSON_2279 atoC, response regulator of ato
MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPD
VVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAF
DYVIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSASWQWGHILTNSP
AMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKV
NCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMP
LVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFRE
DLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAM
SLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEV
KTASVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYK
LQEYGIDPADV
>SSON_2278 atoS, sensor protein AtoS for response regulator AtoC
MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVLSEKEKK
LSAVVNLLNQALGDRYDLYIDLPREERIRALNAELAPITENITHAFPGIG
AGYYNKMLDAIITYAPSALYQNNVGVTIAADHPGREVMRTNTPLVYSGRQ
VRGDILNSMLPIERNGEILGYIWANELTEDIRRQAWKMDVRIIIVLTADL
LISLLLIVLFSRRLSANIDIITDGLSTLAQNIPTRLPQLPGEMGQISQSV
NNLAQALRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRH
ELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVALEISFPGRDRTIELSVTT
SRIHNTHGEMIGALVIFSDLTARKETQRRMAQAERLATLGELMAGVAHEV
RNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQLLEFSRP
RHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRELL
KQVLLNILINAVQAISARGKIRIQTWQYSDSQQAISIEDNGCGIDLSLQK
KIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPI
NPQGNQTV
>SSON_2131 baeR, transcriptional response regulatory protein
MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYV
RQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGL
EIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRF
QASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRT
IDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV
>SSON_2130 baeS, sensor protein (for BaeR)
MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQR
LQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPP
HGWRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVER
LTRNTDINFDKQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGT
HKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQMRRDFMADISH
ELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM
SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGD
RDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFADSAPGVSDE
QLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
VSITVELPLERDLQREV
>SSON_2943 barA, sensor-regulator, activates OmpR by phophorylation
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIE
PLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSN
FHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDA
KNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMR
DVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAY
HEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM
SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLD
FSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPD
NVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDI
SFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQ
CTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA
KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFC
HHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSG
HQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAH
AMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVN
EIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVG
ENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL
ELLDEMDNVAREASKILG
>SSON_4288 basR, transcriptional regulatory protein
MKILIVEDDTLLLQGLILAAQTEGYTCDGVTTARMAEQSLEAGHYSLVVL
DLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLV
KPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELIL
TPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDK
VGKARIRTVRGFGYMLVANEEN
>SSON_4287 basS, sensor protein for BasR
MRFLRRPISLRQRLILTIGAILLVFELISIFWLWHESTEQIQLFEQALRD
NRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQK
ELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADV
AHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAG
QSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGD
ATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK
CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAW
VRLKKDQYVANQI
>SSON_4513 bglJ, 2-component transcriptional regulator
MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA
MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEAR
LIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS
RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD
AGLLEAADILLCMRHCEASNVLHPY
>SSON_0418 bolA, possible regulator of murein genes
MTSQRCRRRYFMMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHF
KVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQ
DTVFASPPCRGAGSIA
>SSON_1229 cheA, sensory transducer kinase between chemo- signal receptors and CheB and CheY
MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSI
KGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE
QLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQ
DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP
GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV
EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH
GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ
VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV
GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEV
AMLIFAPGFSMAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTT
IRILLPLTLAILDGMSVRVGDEVFILPLNAVMESLQPREADLHPLAGGER
VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI
GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA
NTAA
>SSON_1234 cheB, response regulator for chemotaxis
MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNP
DVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELG
AIDFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAG
PLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFA
DRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELARSGANYQIKIHDG
PAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW
TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI
>SSON_1233 cheR, response regulator for chemotaxis; protein glutamate methyltransferase
MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMV
YNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREA
HHFPLLADHAHRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKV
FASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQ
ELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNTQQEILRRFVP
LLKPDGLLFAGYSENFSHLERRFTLRGQTVYALSKD
>SSON_1230 cheW, positive regulator of CheA protein activity
MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIAN
TPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGI
VVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKL
LNSEEMALLDSAASEVA
>SSON_1235 cheY, chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components
MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG
YGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQ
AGASGYVVKPFTAATLEEKLNKIFEKLGM
>SSON_1236 cheZ, chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator
MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPD
ARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFAD
PIDLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGLVIK
RMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKVGVVA
SQDQVDDLLDSLGF
>SSON_2939 chpA, probable growth inhibitor, PemK-like, autoregulated
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVP
CTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQ
LIKAKINVLIG
>SSON_2940 chpR, suppressor of inhibitory function of ChpA, PemI-like, autoregulated
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKE
PVFTLAELVNDITPENLHENIDWGEPKDKEVW
>SSON_0572 citA, putative sensor-type protein
MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLT
LHVRDMAMNQAKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVI
GDRHSIRLYHLNPEKIGYPMQFTKQGALEKGESYFITGKGAMGMAMRAKT
PIFDDDGKVIGVVSIGYLVSKIDSWRAEFLLPMAGVFVVLLGILMLLSWF
LAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDPHGYITAINRN
ARKMLGLSSPGRQWLGKPIAEVVRPADFFTEQIDEKRQDVVANFNGLSVI
ANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHH
NWMSTLNGLLQMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLF
GKVQRARELGLKMIIVPGSQLSQLPPGLDSTEFAAIVGNLLDNAFEASLR
SDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEP
GEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKVKPNDSSINPI
DR
>SSON_0573 citB, sequence similarity to Shigella regulator
MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFK
PGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCG
VFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGE
PKDELPTGIDPLTLNAVRKLFKEPGVQHTAETVAQALTISCTTARRYLEY
CASRHLIIAEIVHGKVGRPQRIYHSG
>SSON_3088 cmtB, PTS system, mannitol-specific enzyme II component, cryptic
MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDST
INNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLL
IGLSAADADSHIGAIQALSELLCEEEILEQLLTAASEKQLADIISRG
>SSON_4081 cpxA, probable sensor protein acting on arcA
MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIE
QHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERS
EMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPAS
SSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEV
AQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHEL
RTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK
NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNAL
ESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIF
RPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
LPLYKRS
>SSON_4082 cpxR, transcriptional regulator in 2-component system
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLL
DVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPK
PFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASF
DGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMH
ISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
>SSON_4548 creB, catabolic regulation response regulator
MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQQVPDV
MILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADD
YVAKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFD
TPLTLTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIK
TLRAKLRAINPDLSPINTHRGMGYSLRGL
>SSON_4549 creC, catabolite repression sensor kinase for PhoB
MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLA
ELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDA
QGKVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYV
AAPIMDGSRLIGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGA
GMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLAQALESMRVKL
EGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQ
NARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKNI
TLHVTPTEVNVAAEPALLDQALGNLLDNAIDFTPESGRITLSAEVDQEHV
TLKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
GEVTLRNVQEGGVLASLRLHRHFT
>SSON_3488 crp, cyclic AMP receptor protein
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAV
LIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY
KKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLN
LAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAH
GKTIVVYGTR
>SSON_2840 csrA, carbon storage regulator
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQR
IQAEKSQQSSY
>SSON_0549 cstA, carbon starvation protein
MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYR
FYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAG
PLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGEL
VKEEMGPTAGVIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTI
PLAIFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFD
FTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI
MRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTT
PKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVL
APAGTADVVASAAQVVSSWGFAITPDTLNQIASEVGEQSIISRAGGAPTL
AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQD
LLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPL
FGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK
AFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTI
FFMVVVVVLALFSIKSALAALKDPKPTAKETPYEPMPENVEEIVAQAKGA
H
>SSON_0157 dksA, dnaK suppressor protein
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQ
LRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE
KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA
G
>SSON_3535 envZ, protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC
MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVL
AYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLR
WAQHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLT
EIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGI
IPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLT
RIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD
LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAAR
YGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTIS
GTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
>SSON_2460 evgA, putative positive transcription regulator (sensor EvgS)
MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVI
IDVDIPGVNGILVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFV
SKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEIS
VMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
NKIG
>SSON_2461 evgS, putative sensor for regulator EvgA
MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVILDPVRLSNKELR
WLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRTLNIKLTL
REYADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVT
TLHDSMRPLTSSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALAS
VSAGQNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESV
VLNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQ
HPDLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSH
NIHAGTQLNPGGWDILPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDS
EQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIIN
KALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSS
LLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVIS
HNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYT
QVFEIDNGIEKRCINHWHTLCNLPASDHAVYICGWQDITETRDLIHALEV
ERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEA
ISLAYSTGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFG
AIAASKSIALICSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVK
ITTSLVHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGS
GLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAE
HPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSM
QHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLS
CGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQ
LMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQK
LINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND
>SSON_4464 fecR, regulator for fec operon, periplasmic
MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAW
QQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQ
SETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADMRFDAHQRTVRL
WYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQH
AVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFS
DKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTL
PVKIQSITRYWINISPL
>SSON_1197 fliY, putative periplasmic binding transport protein
MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGT
YPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKR
IDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGK
KVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLA
ALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDG
TLQALSEKWFGADVTK
>SSON_1799 fnr, transcriptional regulation of aerobic, anaerobic respiration, osmotic balance
MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKK
PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVG
FDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE
IKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDI
GNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA
>SSON_4070 frvA, PTS system, fructose-specific IIA component
MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREK
MHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICL
GVPQSGEEDQVKIIGTLCRKIIHQDFIHQLQQGDADQVLALLNQTLSS
>SSON_4067 frvR, putative frv operon regulatory protein
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKAR
IFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASA
LNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLL
RKDPFLIPLAGVTRDNFQHLSTACDNQHRWPLMQGDYLSSLILAIYALRN
QLTDEWPQYPGNEIKQIVEQSGMFLGDNAVRTLTGLIEKQHQQAQVISAD
HVLGLLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNN
LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQP
IILLSDQNAIATINQLAIERDVLHCRVIIARSLSELIAIREEIEPLLIIN
NSHYLLDDAVNNYITVKNIITAADIEQIKHFLATAFIRQQPERFFSAPGS
FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNR
LAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKI
FSYLASVLCQHPAEVIAGLTGYEAFMELLHKG
>SSON_3190 glnE, adenylylating enzyme for glutamine synthetase
MKPLSSPLQQYRQTVVERLPEPLAEEPLSAQAKSVLTFSDFVQDSIIAHR
EWLTELESQPPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVR
IAWAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQG
EAQPLLILGMGKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFT
RMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFAALEDYYQEQG
RDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMK
GMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSCSLL
PTLSAIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDEL
NRARLAWAMDFADWPQLTGALTAHMNNVRRVFNELIGDDESETQEESLSE
QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLISDFRKELDKRTIGPRG
RQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPA
ALNHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQ
YLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLA
EAMIDAVVQQAWVQMVARYGKPNHLNDREGRGFAVVGYGKLGGWELGYSS
DLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFSTRTSSGILYE
VDARLRPSGAAGMLVTSTEAFADYQKNEAWTWEHQALVRARVVYGDPQLT
AHFDAVRREIMTLPREGRTLQTEVREMREKMRAHLGNKHRDRFDIKADEG
GITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMAL
TRAYTTLRDELHHLALQELPGHVSGDCFTAERDLVRASWQKWLVEE
>SSON_4040 glnG, response regulator for gln
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDV
LLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFD
YLPKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDV
FRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAI
PKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQT
RLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR
LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTR
LAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
LLGWGRNTLTRKLKELGME
>SSON_0791 glnH, periplasmic glutamine-binding protein
MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFD
VDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKA
IDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANI
KTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGD
SLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK
>SSON_4041 glnL, histidine protein kinase sensor for GlnG regulator
MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGT
PLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMP
DGMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRG
AAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIH
KVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNAL
QALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL
FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK
>SSON_2367 hisJ, histidine-binding periplasmic protein of high-affinity histidine transport system
MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVG
FDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQ
QEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNE
HWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDY
KFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAK
KYFDFDVYGG
>SSON_1944 hnr, Hnr protein
MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGF
TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRL
GVEDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDAMVDNP
AAAAKLLQELQPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAF
YCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNH
LLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP
LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE
>SSON_4177 hydG, response regulator of hydrogenase 3 activity (sensor HydH)
MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVF
DLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGA
LDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVSASQFGMVGKSPAMQH
LLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAA
LNESLLESELFGHEKGAFTGADRRREGRFVEADGGTLFLDEIGDISPMMQ
VRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYY
RLNVVAIEVPSLRQRREDIPLLAVHFLQRFAERNRKAVKGFTPQAMDLLI
HYDWPGNIRELENAVERAVVLLTGEYISERELPLAIAGTPIPLGQSQDIQ
PLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
>SSON_4176 hydH, sensor kinase for HydG, hydrogenase 3 activity
MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLL
EKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQG
TIVMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQF
QPMFAAGMHRMRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFA
LATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAAGVAHEIR
NPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKP
THLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRL
TQVLLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKGIAADQLDA
IFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTLWLPVT
ITRKGPQG
>SSON_2572 hyfR, putative 2-component regulator, interaction with sigma 54
MFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELH
VLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAELRFIRT
HGCRFTPQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVL
VDITNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWC
SDLSASHCACLPRNMPGDSVLLTQTLQTRQPTLTHRADDLFLWQRDPLLL
LLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRI
AIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDL
LQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAI
PASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQP
KLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYR
LNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRSIDAIPTEALRQLMS
WDWPGNVRELENVIERAVLLTRGNSLNLHLNVRQSHLLPTLNEDSALRSS
MAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLS
RMQRLGLSVREVL
>SSON_0646 kdpD, sensor for high-affinity potassium transport system
MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRA
QGLDIVVGVVETHGRKDTAAMLEGLAVLPPKRLAYRGRHICEFDLDAALA
RRPALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESL
NDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAG
QAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGHPSEEKVWHTR
DAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRR
AILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRW
WRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFKDKWRVQIQ
GCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRY
QARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVL
LPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQIL
PLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANALERLTLTAS
EEQARMASEREQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPH
ARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLTLEEVVGSALQ
MLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAEIG
IDAHFEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLA
ICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEDFHEDM
>SSON_0645 kdpE, regulator of kdp operon
MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLII
LDLGLPDGDGIEFIRDLRQWSPVPVIVLSARSEESDKIAALDAGADDYLS
KPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEV
HLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLR
QKLEQDPARPRHFITETGIGYRFML
>SSON_4223 lexA, regulator for SOS(lexA) regulon
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL
ARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQV
DPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID
DEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGD
WL
>SSON_1956 narL, pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes
MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES
LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALK
RGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTE
RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL
KSRVEAAVWVHQERIF
>SSON_2251 narP, nitrate/nitrite response regulator
MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR
LDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALID
AGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDP
FSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS
RVAATILFLQQRGAQ
>SSON_2549 narQ, sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL)
MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLR
MQSYRLGYDLQSGSPQLNAHRQLFQQALHSSVLTNLNVWYVPEAVKTRYA
HLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLV
VAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPL
DTSLPNELGLLAKTFNQMSSELHKLYLSLEASVEEKTRDLHEAKRRLEVL
YQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNP
ELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQ
KHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQS
IMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDG
NHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTL
VSISFRSAEGEESQLM
>SSON_1955 narX, nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator
MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKA
GSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQ
GLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIE
TVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQR
ANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSF
LWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF
TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQ
GRHLSHDQQQLLDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHD
SIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLT
TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLL
QIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNH
YGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE
>SSON_4252 nrfB, formate-dependent nitrite reductase
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAA
CLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMR
FNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQ
DTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
>SSON_3536 ompR, response regulator
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH
LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD
DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTR
EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS
IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
>SSON_0376 phoB, positive response regulator for pho regulon
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDCAVNQLNEPWPDLI
LLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGAD
DYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGE
EPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIR
RLRKALEPGGHDRMVQTVRGTGYRFSTRF
>SSON_1039 phoH, PhoB-dependent, ATP-binding pho regulon component
MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDAVNGARS
RFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVI
KARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPIL
ARNEAQLHYLKAIESKQLIFATGEAGGGKTWISAAKAAEALIHKDVDRII
VTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPE
IGKVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIV
NGDITQCDLPRGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTL
HAYS
>SSON_1148 phoP, transcriptional regulatory protein
MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIV
DLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT
KPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKL
TAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKK
IQAQYPQEVITTVRGQGYLFELR
>SSON_1147 phoQ, sensor protein PhoQ
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFR
LLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQR
DVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDD
DDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLS
ANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSL
VRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV
SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSA
LNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEI
SARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
>SSON_0377 phoR, positive and negative sensor protein for pho regulon
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNL
LRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRF
RSGAESLPDAVVLTTEESGIFWCNGLAQQILGLRWPEDNGQNILNLLRYP
EFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQL
EGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVREKALHTMREQT
QRMEGLVKQLLTLSKIEAAPTQLLNEKVDVPMMLRVVEREAQTLSQKKQT
FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGA
EFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNH
HESRLNIESTVGKGTRFSFVIPERLIAKNSD
>SSON_2056 pocR, pdu/cob regulatory protein
MISAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQMM
RQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLV
GFVLCGQVRLRNDDVDLVDILNVDDCWQADPELLNEFRKVPEMDYSRVMA
SADLLKLIVENCLKKQLNFVVIKENKSRSDSVRQTRAPNPHDNTVIFAKF
SVRLIRLRRRCIDSK
>SSON_1330 proQ, Activator of ProP osmoprotectant transporter
MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEM
NLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHAR
KQLEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKE
GAERKPRAQKPVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNA
MDATVLEITKDGVRVQLNSGMSLIVRAEHLVF
>SSON_1836 pspA, phage shock protein
MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARA
LAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDL
IKSLEHEVTLVNDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSR
DVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAEL
KADDAISEQLAQLKAKMKQDNQ
>SSON_1834 pspC, phage shock protein
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLA
LFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLRE
MERYVTSDTFTLRSRFRQL
>SSON_1837 pspF, psp operon transcriptional activator
MANFIMAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELI
ASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGR
FERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLV
CATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAI
QMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNAVERSVYRHGTSDY
PLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSL
QKGKYNQKRAAELLGLTYHQFRALLKKHQI
>SSON_3352 ptsN, phosphotransferase system enzyme IIA, regulates N metabolism
MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVV
FEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAID
NQPVDLLFALLVSADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELY
QIITDTEGTPDEA
>SSON_2986 ptsP, PTS system enzyme I
MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCY
YLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIP
SVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQM
AAILSQSQLTALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQA
STLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLS
DTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRA
LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRD
GAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPV
LLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTL
DVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATG
NLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS
MVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRA
LAMIAREAEIHGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVK
YLLRRIDYAEAENLAQRSLEAQLATEVRHQVAAFMERRGMGGLIRGGL
>SSON_4377 ptxA, putative PTS system enzyme II A component
MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDA
VEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVD
ILITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRT
NAAA
>SSON_3164 qseB, quorum sensing regulator B
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVIL
DLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLC
KPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTL
KPKEFALLELLMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRK
LGSDFIRTVHGIGYTLGEK
>SSON_3165 qseC, quorum sensing regulator C
MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLML
FAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLN
DGDNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWE
YREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRD
PDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRS
PLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLD
SLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQP
LLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGVTPEALARI
GERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW
>SSON_2276 rcsB, positive response regulator for colanic capsule biosynthesis
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA
HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLD
LDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR
LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIA
LLNYLSSVTLSPADKD
>SSON_2277 rcsC, sensor for ctr capsule biosynthesis
MFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRT
SDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSN
TWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVE
RDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLA
NRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKG
DPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLI
LNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASA
PVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDV
LTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQA
SQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSS
LLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDY
LSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLIS
MMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNA
SLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFC
RRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTD
KAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSK
NHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLE
SGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES
>SSON_2941 relA, (p)ppGpp synthetase I
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHP
DASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVG
KSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVV
IKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELED
YCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVY
GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELG
VAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQD
RDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGD
IRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPE
RIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASR
SDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>SSON_2696 rseA, sigma-E factor, negative regulatory protein
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEV
LHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWHKMPFWQKVRPWAAQ
LTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSL
GVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQ
AAVQVPGLQTLGTQSQ
>SSON_2695 rseB, regulates activity of sigma-E factor
MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISI
NKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPF
TLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARD
GTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRVISFNVNQDISSSMQT
LAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIE
SRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGEL
PPQTAKRIAENIKFGAAQ
>SSON_2694 rseC, sigma-E factor
MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHT
IVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLF
ASDVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPDLVRF
ETSSEDASQ
>SSON_1552 rstA, response transcriptional regulatory protein (RstB sensor)
MNVMNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPD
LVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACD
YILKTTPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTID
PINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDG
LDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE
>SSON_1551 rstB, sensor histidine protein kinase
MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLM
RSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEI
VALDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALITFIAISLA
FPVFIWMRPHWQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGIAFNQ
MADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNR
DISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDK
TVRIKTLAQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRA
TLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALA
MGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA
>SSON_2232 rtn, hypothetical protein
MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLIIDV
QKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVK
DKKTFCSSATGEMDIPLNELIPALNINKNVDMAILPGTPMVPNKPAIVIW
YRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSR
LMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVV
GLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR
WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGV
KFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEAT
QLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
ITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRP
LPLDDFVRWLKKPYTPQW
>SSON_3755 spoT, (p)ppGpp synthetase II
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPV
AVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV
SKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKE
VVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLK
EQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTT
AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL
PAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKL
NEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPP
ATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR
NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTT
TSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRN
RN
>SSON_1414 spy, periplasmic protein related to spheroblast formation
MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDM
MFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAK
AEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERP
AAR
>SSON_1232 tap, methyl-accepting chemotaxis protein IV
MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQR
AALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTL
FKSFMAMTAGNEHVRALQKETEKSFARWHNDLEHQATWLESNQLSDFLTA
PVQGSQNAFDVNFEAWQLEINHVLEAASAQSQRNYQISTLVFISMIIVAA
IYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVYGRNEITAIFA
SLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQ
TAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEI
ATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVND
IMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQ
ADHLSSRVAVFTLEEHEVARHESAQLQIAPVVS
>SSON_1231 tar, methyl-accepting chemotaxis protein II
MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQ
GELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQA
ATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYF
AQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALV
VVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDL
AQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL
EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMH
EIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLASRSAQAAKEIKALIEDSVARVDTGSVLVESAGETMNNIVNAVTRV
TDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALE
EQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNW
ETF
>SSON_1003 torR, response transcriptional regulator for torA
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLI
LLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYV
TKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLE
RDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVD
VLIRRLRHKLSADLLVTQHGEGYFLAADVC
>SSON_1001 torS, sensor protein torS
MGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASA
WELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIE
QQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSA
LRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVA
TTLTTVSQYSDLLALFQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDT
IELRNQHGLAHQEKASARGQYSLLLLGMVSLCALILILWRVVYRSVTRPL
AEQTQALQRLLDGDIDSPFPETAGVRELDTIGQLMGAFRSSVHALNRHRE
QLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLY
GILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGK
NVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPR
RIRQVITNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLA
EIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRL
PLRVATAPVPKTVNQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVA
VGNAAQALETLQNSEPFAAALVDFDLPDVDGITLARQLAQQYPSLVLIGF
SAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQVNNDQSLDV
SQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIKRAAH
QLKSSCLSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKD
LNAI
>SSON_1721 trg, methyl-accepting chemotaxis protein III
MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQADRDQ
RDVTAEIEIRTGLANSSDFLRSARINMIQAGAASCIAEMEAMKRNIAQAE
SEIKQSQQGYRAYQNRPVKTPADEALDTELNQRFQAYITGMQPMLKYAKN
GMFEAIINHESEQIRPLDNAYTDILNKAVKIRSTRANQLAELAHQRTRLG
GMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKIASGDLTMKDE
PAGRNEIGRLNRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLS
SRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQ
TVSGVVKTMGAISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQ
GRGFAVVASEVRTLASRSAQAAKEIEGLISESVRLIDLGSDEVATAGKTM
STIVDAVASVTHIMQEIAAASDEQSRGITQVSQAISEMDKVTQQNASLVE
EASAAAVSLEEQAARLTEAVDVFRLHKHSVSAEPRGAGEPVSFATV
>SSON_3623 uhpA, response regulator, positive activator of uhpT transcription (sensor, uhpB)
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQV
CICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS
KRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLA
QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
>SSON_3622 uhpB, sensor histidine protein kinase phosphorylates UhpA
MMKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRL
GLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVAL
ISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGL
TLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWL
QLGLPDELSRFTPFCLVLPIIALAWHYGWQGALIATLMNAIALIASQTWR
DHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLE
TEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQ
LSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEW
RIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVI
EDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRY
V
>SSON_1174 umuD, UmuD
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA
TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ
LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
>SSON_3730 uspA, universal stress protein
MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGL
IDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIK
KYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE
>SSON_1204 uvrY, putative 2-component transcriptional regulator
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDV
VLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAG
YLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASL
SERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVEL
THLAIRHGLCNAETLSSQ
>SSON_3777 waaP, lipopolysaccharide core biosynthesis protein
MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSYFLK
WHRGTTLKEIIKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEK
GINPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMV
RDMHAVGINHRDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRR
WRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFVAPLKDILKQEQGLLSQAE
AKATKIRERTIRKSL
>SSON_2114 wzb, probable protein-tyrosine-phosphatase
MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAI
SVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGK
VMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV
>SSON_0175 yaeG, hypothetical protein
MHNGGLMAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGL
TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE
NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT
PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL
RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL
LDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKAL
FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
>SSON_0360 yaiC, hypothetical protein
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLA
GMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIY
NLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLM
VVSCLVTLELTGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLA
EHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDID
HFKSINDTWGHDVGDEAIVALTRQLQITLRGSG
>SSON_0521 ybcZ, putative 2-component sensor protein
MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDIND
LKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYH
SPGAPDIREFTRDAIPDKDAQGGEVYLLSGPTIMMPGHGHGHMEHSNWRM
INLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVF
IVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTEPIELEQLVLSFNH
MIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDV
LYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFE
ALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTPTRETIVVR
CQTVDHQVQVTVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLA
IVKSIVVAHKGTVAVTSDARGTRFVIMLPERE
>SSON_0559 ybdQ, hypothetical protein
MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHR
FAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNEL
AEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVIR
>SSON_0609 ybeJ, putative periplasmic binding transport protein
MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESS
VPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIP
LLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFAD
LKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHSDSFRTLESGRAV
AFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMD
DTTAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA
LN
>SSON_0614 ybeZ, putative ATP-binding protein in pho regulon
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLG
IEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHL
AIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDI
TFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGD
LSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDA
FIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA
IEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAE
RKREEQEQK
>SSON_0782 ybiI, hypothetical protein
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQAR
REAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
>SSON_0989 yccY, putative phosphatase
MDSNMAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLIK
HPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTA
IAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRL
SR
>SSON_1800 ydaA, hypothetical protein
MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTT
LLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAI
IQEVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPW
PEGGKALVAVNLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPV
TPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINENMTHVEKGLP
EEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK
PDQYQTPVELDDEEDD
>SSON_1593 ydeH, hypothetical protein
MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYG
LCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQD
AHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQ
LRNTDPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYE
TVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVT
AGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV
>SSON_1379 yeaG, hypothetical protein
MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPV
MVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLE
EKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFC
LFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVW
PSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGA
LCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL
AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSE
LTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKA
KSYQEYRDYAGVDEGMKGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQ
NIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPK
DFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS
FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS
>SSON_1377 yeaI, hypothetical protein
MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGT
QKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFL
NAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGST
LIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLA
LIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWA
FLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRG
IEVSSKLFVVSFLIYNIFQKLQLSSKLAVHDVLTNIYNRRYFFNSVESLL
SRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDI
LARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTI
SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI
>SSON_1375 yeaJ, hypothetical protein
MLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRA
LAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDC
DTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYF
YEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQ
NVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTD
TDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVL
FWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQ
KLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSD
YAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYA
MKENDTLHDAYKASDERLYVNKQNKNSRS
>SSON_1367 yeaP, hypothetical protein
MQHYFYYIHSKHITSCFIFVGDVLSCLQRLNNQHLPAVSWSCFVSDQIIA
RVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFAR
NSQKMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGIS
TFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKE
ALVEQLREANAALIAQSYTDSLTGLPNPRAIFENLTTLFSLARHLNHKIM
IAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEF
LVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPET
TDADSALHAADIAMYQEKKHKQKTPFVAHSAPHC
>SSON_1222 yecG, putative regulator
MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLA
APMLEDLRSVMQEETQSFLDKFIQDAGYPVDKTFIAYGELSEHILEVCHK
HHFDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD
>SSON_2026 yedV, putative 2-component sensor protein
MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTA
QIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDM
LNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASAR
HNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYN
DSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTP
INALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADK
NNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQ
RMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDVASPGTKIHEPEKLF
RRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRIMLPQ
RN
>SSON_2027 yedW, putative 2-component transcriptional regulator
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLVSITY
DLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKD
DYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSG
ANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRNN
ISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIR
RLRAKVDDPFPEKLIATIRGMGYSFVAVKK
>SSON_2120 yegE, putative sensor-type protein
MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPT
SIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVE
AVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGD
DPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAI
TLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMM
AADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES
ETRFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQL
TWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHT
DGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWERELKPN
VFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSP
FKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEAL
FQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL
LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITP
LSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQL
RILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSM
LRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVH
RVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAA
HSERAAMSLDEQWRMIKENQLMMIAHGVASPRIPEARNLWLISLKLWSCE
GEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISIALPLS
VAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLQLAG
CRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQ
GHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGDVIADAQPLDLLVNSS
YFAIN
>SSON_2171 yehT, hypothetical protein
MEGRGMIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK
LRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHA
FDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRI
YLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQY
LVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
>SSON_2172 yehU, putative 2-component sensor protein
MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVF
SIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRY
SMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVA
EMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAM
FEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAI
TDREKLLAFTGIGDDHHLPGKPISSPYTLKAIETGEVVYADGNEVPYRCS
LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQL
LSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSE
QASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHL
MLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTR
ITLRLPWRDEA
>SSON_2219 yeiL, putative transcriptional regulator
MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLY
ATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKH
YRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQ
EGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQ
LSGLALEMDPENKFSGMMQ
>SSON_2637 yfhA, putative 2-component transcriptional regulator
MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKV
DLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGV
FSFLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQA
RLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQL
LESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLR
VLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVV
SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWP
GNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFEL
NYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE
>SSON_2639 yfhK, putative 2-component sensor protein
MLYLNFPSVSIRLFASDESNTLKRWPVFPRSLRQLVMLAFLLILLPLLVL
AWQAWQSLNALSDQAALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLD
DPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNNLAQLQCNNS
GPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQS
LVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSEL
RSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQV
VGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAP
LVETVVSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHY
GAESGNICLRSSSHGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKG
AVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK
>SSON_2761 yfiN, hypothetical protein
MTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTR
KDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFS
LAVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRV
SEERIAEFHRFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLAN
RAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEI
AKRLAEVGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPF
DLHNGHQTTMTLSIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR
>SSON_2853 ygaA, putative 2-component transcriptional regulator
MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRF
QRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPR
LEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLI
GALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMMPGD
ATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVA
KAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLA
ATNRDLREEVMAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQ
CRLRLGLSRVVLSAGARNLLQHYRFPGNVRELEHAIHRAVVLARATRNGD
EVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQN
HHNWAACARMLETDVANLHRLAKRLGMKD
>SSON_2831 ygaG, hypothetical protein
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPE
RGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRV
ADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERD
VRINSNEELALPKEKLQELHI
>SSON_3020 ygeV, putative transcriptional regulator
MELATTQSVLMQIQPTIQRFARMLASVLQFEVEIVDENLCRVAGTGAYGK
FLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLG
TPVILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLE
DQGPGDNISKIFATMIDNMDQGVLVVDDESRVQFVNQTALKTLGVVQNNI
IGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHNIQGRQLFLMA
FHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVG
ESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFT
GASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGAS
SPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYL
VNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEE
MEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT
>SSON_3192 ygiM, hypothetical protein
MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTV
NAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLEN
QVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIV
AQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKR
KDRWMN
>SSON_3393 yhdA, hypothetical protein
MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAID
THLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGS
SDLFRELSVPLIKHPGMSLRLVYQDPMGNYFHSLMTTAPLTGAIGFIIVM
LFLAVRWLQRQLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALD
TLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDNQLATLLEDQE
KVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIG
ICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWR
TLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRD
TLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGL
TLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTHV
YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV
>SSON_3409 yhdW, putative periplasmic binding transport protein
MQCGISDGLPGFSYADADGKFSGIDVDVCRGVAAAVFGDDTKVKYTPLTA
KERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTDYDGIGFLTHDKA
GLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKA
LESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDD
EWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGK
DLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQY
APPVR
>SSON_3574 yhiE, hypothetical protein
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHN
HILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLE
ITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ
KFNIMYKLKLRRMSDIVTLGITSYF
>SSON_3871 yhjB, putative regulator
MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALV
MLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAI
VPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREIL
TMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS
>SSON_3866 yhjH, hypothetical protein
MMIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVEL
LTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFVEHD
LLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASM
CEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFS
QLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPMETLN
TAVLAL
>SSON_3862 yhjK, hypothetical protein
MAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAI
LKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPIMVT
RLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVT
IYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRL
HQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLE
QVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRM
ILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCS
IGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLT
EESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDG
LIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHP
NMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRV
ALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLA
QSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFAHPLPIEIFEESYLEE
K
>SSON_4043 yihK, putative GTP-binding factor
MDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMV
DSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVD
QVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVD
HVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS
EGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQ
NVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHN
VALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYV
IPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNG
QGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKK
LTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHL
TENDRRRANRAPKDD
>SSON_4083 yiiO, Uncharacterized periplasmic protein
MMRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGI
SLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQA
EKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQW
QKSSSLKLLSSSNSRSQ
>SSON_4092 yiiT, putative regulator
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGI
YFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQ
KEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
>SSON_4175 yjaI, hypothetical protein
MSKNDSLPAAGESFLLVYHARLPVISAFHRWHGRCNTRSKTTTGGLTMKR
NTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHN
DFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDE
LRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW
>SSON_4241 yjcC, hypothetical protein
MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLAL
DKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYAR
DNHFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQR
GNYVAVINPLFWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLI
HLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFYNHLIFALPAG
ILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI
GAEALLRWLGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGAYL
ATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFL
DVEKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVE
TLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQG
WFFAKAMPPQVFMQWMEQLPARELTRGQ
>SSON_4301 yjdG, putative 2-component transcriptional regulator
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPI
DLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGV
VDYLIKPFQASRFEEALTDWRQKKMALEKHQYYDQAELDQLIHGSSSNEQ
DPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLI
WLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
>SSON_4302 yjdH, putative 2-component sensor protein
MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRD
GLANKALAVARTLANSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVV
TDMQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFT
PIYDENHKQIGVVAIGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCI
LVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDDRGEVTLINDA
AQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL
LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHE
FMNKLHVILGLLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGF
LISKINRATDLGHTLILNSESQLPDSGSEDQVATLITTLGNLIENALEAL
GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSER
GVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR
>SSON_4487 yjiY, putative carbon starvation protein
MPGFTMDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVS
VYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHF
AAIAGAGPLVGPVLAAQMGHLPGTLWLLAGVVLAGAVQDFMVLFISSRRN
GASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGV
FTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHDP
YWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVG
LALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHA
LISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAM
NTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPE
QILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGIL
FEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVG
LWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQ
YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTD
LTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKR
TDKETPYVPIPEGGVKISSHH
>SSON_0444 ylaB, hypothetical protein
MLVRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRV
AIRANKVATQGKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYI
DNNVPQCSSLEHESPPDTFPEPGKISKDGYRVWLTSHNDLGIIRYMVAMG
TAHYVVMIDPASFIDVIPYSSWQIDAAIIGNAHNVVITSSDEIAQGIITR
LQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKGWHRQVFIWLP
LGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK
IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSAFEDMGD
WLRQHPQQHISINLESTVLTSEKIPQLLREMINQSG
>SSON_0522 ylcA, putative 2-component transcriptional regulator
MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIIL
DIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLV
KPFAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRIT
LTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRG
KIDNDFEPKLIQTVRGVGYMLEVPDGQ
>SSON_1749 ynaF, putative filament protein
MNSVITQKVSSGVTLYADTKTGGFMNRTILVPIDISDSELTQRVISHVEA
EAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEII
KKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLG
SNAAAVVRHAECSVLVVR
>SSON_2275 yojN, putative 2-component sensor protein
MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKS
YQIVDITHAIQKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVY
YLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNG
QDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFS
NMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRL
EPDTTATGDNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGT
LLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESLPNTAVNNEL
RILRAINEKIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTM
AEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQAD
VLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQ
LLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESS
EDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQL
ARKLGGHLNIKTRDGLGTRYSVHIKMLAAGPEVEEEEERLLDDVCVMVDV
TSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLL
SDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGD
ENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAM
LNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL
>SSON_3006 yqeH, hypothetical protein
MTSSITNEIMQLYTDREVLNMGLCSRYKSLTCNSCSMHCQIMPEESPRLQ
YCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNTAISAVIYNDDGLDV
ANEKIRQLFIGRYLSFTRGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
RSIYAYKQRIEKRMGGKINELFIRSHSVQH