Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Gene type: CDS
Genomic element: chromosome
Number of genes found: 105
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Escherichia coli UTI89, UTI89 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | UTI89_C2180 | putative ABC transporter protein | SubName: Full=Putative ABC transporter protein; | chromosome | CDS | 2074098 | 1830 | - | 0.583607 |
NA | UTI89_C1609 | putative secretion protein | SubName: Full=Putative secretion protein; | chromosome | CDS | 1520401 | 1029 | + | 0.462585 |
NA | UTI89_C2219 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2151656 | 249 | - | 0.39759 |
NA | UTI89_C2215 | putative polyketide synthase | SubName: Full=Putative polyketide synthase; | chromosome | CDS | 2141331 | 3033 | - | 0.569073 |
NA | UTI89_C4409 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4295309 | 600 | - | 0.506667 |
NA | UTI89_C0574 | putative resistance protein | SubName: Full=Putative resistance protein; | chromosome | CDS | 582933 | 1224 | + | 0.558007 |
NA | UTI89_C3399 | acyl carrier protein, putative | SubName: Full=Acyl carrier protein, putative; | chromosome | CDS | 3336843 | 249 | + | 0.409639 |
NA | UTI89_C3245 | 2-deoxy-D-gluconate 3-dehydrogenase | SubName: Full=2-deoxy-D-gluconate 3-dehydrogenase; EC=1.1.1.125; | chromosome | CDS | 3172935 | 762 | - | 0.519685 |
NA | UTI89_C1385 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1320413 | 813 | - | 0.549815 |
NA | UTI89_C0565 | hypothetical protein YbcY precursor | SubName: Full=Uncharacterized protein; | chromosome | CDS | 570159 | 666 | - | 0.40991 |
NA | UTI89_C2213 | putative peptide synthetase | SubName: Full=Putative peptide synthetase; | chromosome | CDS | 2128312 | 6465 | - | 0.563496 |
NA | UTI89_C4410 | putative carboxymethylenebutenolidase | SubName: Full=Putative carboxymethylenebutenolidase; EC=3.1.1.45; | chromosome | CDS | 4296234 | 876 | - | 0.527397 |
NA | UTI89_C3421 | putative enzyme | SubName: Full=Putative enzyme; EC=3.1.1.45; | chromosome | CDS | 3357679 | 927 | - | 0.523193 |
NA | UTI89_C1394 | glycerol metabolism operon regulatory protein | SubName: Full=Glycerol metabolism operon regulatory protein; | chromosome | CDS | 1329706 | 1929 | + | 0.514256 |
NA | UTI89_C1564 | acriflavine resistance protein B | SubName: Full=Acriflavine resistance protein B; | chromosome | CDS | 1474282 | 3108 | + | 0.520914 |
NA | UTI89_C2222 | putative peptide/polyketide synthase | SubName: Full=Putative peptide/polyketide synthase; | chromosome | CDS | 2155454 | 9630 | - | 0.533333 |
NA | UTI89_C2411 | putative oxidoreductase | SubName: Full=Putative oxidoreductase; EC=1.-.-.-; | chromosome | CDS | 2367700 | 762 | - | 0.551181 |
NA | UTI89_C2209 | putative polyketide synthase | SubName: Full=Putative polyketide synthase; | chromosome | CDS | 2118501 | 2460 | - | 0.521138 |
NA | UTI89_C2214 | putative peptide synthetase | SubName: Full=Putative peptide synthetase; EC=6.3.2.-; | chromosome | CDS | 2134787 | 6501 | - | 0.561144 |
NA | UTI89_C2221 | putative polyketide synthase | SubName: Full=Putative polyketide synthase; | chromosome | CDS | 2152813 | 2610 | - | 0.550192 |
NA | UTI89_C4813 | putative oxoacyl reductase | SubName: Full=Putative oxoacyl reductase; EC=1.1.1.-; | chromosome | CDS | 4707991 | 792 | - | 0.530303 |
NA | UTI89_C2216 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2144413 | 4812 | - | 0.553616 |
NA | UTI89_C1522 | unknown protein encoded by prophage CP-933X | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1433896 | 666 | - | 0.411411 |
NA | UTI89_C2210 | putative peptide synthetase | SubName: Full=Putative peptide synthetase; EC=6.1.1.13; | chromosome | CDS | 2120991 | 4455 | - | 0.539169 |
NA | UTI89_C2207 | putative thioesterase | SubName: Full=Putative thioesterase; EC=3.1.2.-; | chromosome | CDS | 2116259 | 723 | - | 0.460581 |
acpP | UTI89_C1220 | acyl carrier protein | RecName: Full=Acyl carrier protein; Short=ACP; | chromosome | CDS | 1196579 | 237 | + | 0.481013 |
acrD | UTI89_C2796 | probable aminoglycoside efflux pump | SubName: Full=Probable aminoglycoside efflux pump; | chromosome | CDS | 2737221 | 3114 | + | 0.545279 |
acrF | UTI89_C3708 | acriflavine resistance protein F | SubName: Full=Acriflavine resistance protein F; | chromosome | CDS | 3632991 | 3105 | + | 0.510145 |
bioC | UTI89_C0775 | biotin synthesis protein BioC | RecName: Full=Malonyl-[acyl-carrier protein] O-methyltransferase; Short=Malonyl-ACP O-methyltransferase; EC=2.1.1.197; AltName: Full=Biotin synthesis protein BioC; | chromosome | CDS | 774580 | 795 | + | 0.56478 |
caiC | UTI89_C0043 | probable crotonobetaine/carnitine-CoA ligase | RecName: Full=Probable crotonobetaine/carnitine-CoA ligase; EC=6.2.1.-; | chromosome | CDS | 38906 | 1569 | - | 0.508604 |
ccmA | UTI89_C2479 | heme exporter protein A | RecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; EC=3.6.3.41; AltName: Full=Heme exporter protein A; | chromosome | CDS | 2433901 | 624 | - | 0.554487 |
cydC | UTI89_C0901 | transport ATP-binding protein CydC | SubName: Full=Transport ATP-binding protein CydC; | chromosome | CDS | 897856 | 1722 | - | 0.534843 |
cydD | UTI89_C0902 | transport ATP-binding protein CydD | SubName: Full=Transport ATP-binding protein CydD; | chromosome | CDS | 899578 | 1767 | - | 0.532541 |
emrK | UTI89_C2700 | multidrug resistance protein K | SubName: Full=Multidrug resistance protein K; | chromosome | CDS | 2643444 | 1164 | - | 0.414948 |
entA | UTI89_C0598 | 2,3-dihydro-2,3-dihydroxybenzoate | SubName: Full=2,3-dihydro-2,3-dihydroxybenzoate; EC=1.3.1.28; | chromosome | CDS | 612472 | 747 | + | 0.57162 |
entB | UTI89_C0597 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | SubName: Full=2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; EC=3.3.2.1; | chromosome | CDS | 611615 | 858 | + | 0.548951 |
entC | UTI89_C0595 | isochorismate synthase | SubName: Full=Isochorismate synthase; EC=5.4.4.2; | chromosome | CDS | 608794 | 1188 | + | 0.557239 |
entD | UTI89_C0583 | 4'-phosphopantetheinyl transferase EntD | SubName: Full=4-phosphopantetheinyl transferase EntD; EC=2.7.8.-; | chromosome | CDS | 593566 | 771 | - | 0.485084 |
entE | UTI89_C0596 | enterobactin synthetase component E | SubName: Full=Enterobactin synthetase component E; EC=2.3.1.-; | chromosome | CDS | 609991 | 1611 | + | 0.564867 |
entF | UTI89_C0588 | enterobactin synthetase component F | SubName: Full=Enterobactin synthetase component F; EC=2.7.7.-; | chromosome | CDS | 598264 | 3882 | + | 0.563112 |
eutK | UTI89_C2771 | ethanolamine utilization protein EutK | SubName: Full=Ethanolamine utilization protein EutK; | chromosome | CDS | 2711662 | 507 | - | 0.579882 |
eutM | UTI89_C2781 | detox protein | SubName: Full=Detox protein; | chromosome | CDS | 2721801 | 336 | - | 0.568452 |
eutN | UTI89_C2780 | detox protein | SubName: Full=Detox protein; | chromosome | CDS | 2721407 | 288 | - | 0.538194 |
fabB | UTI89_C2608 | bifunctional beta-ketoacyl-ACP synthase I/malonyl-ACP decarboxylase | SubName: Full=Bifunctional beta-ketoacyl-ACP synthase I/malonyl-ACP decarboxylase; EC=2.3.1.41; | chromosome | CDS | 2572798 | 1221 | - | 0.561016 |
fabF | UTI89_C1221 | 3-oxoacyl-[acyl-carrier-protein] synthase II | RecName: Full=3-oxoacyl-[acyl-carrier-protein] synthase 2; EC=2.3.1.179; | chromosome | CDS | 1196902 | 1242 | + | 0.533011 |
fabG | UTI89_C1218 | 3-oxoacyl-[acyl-carrier-protein] reductase | SubName: Full=3-oxoacyl-[acyl-carrier-protein] reductase; EC=1.1.1.100; | chromosome | CDS | 1195634 | 735 | + | 0.515646 |
fadD | UTI89_C1999 | long chain fatty acid CoA-ligase | SubName: Full=Long chain fatty acid CoA-ligase; EC=6.2.1.3; | chromosome | CDS | 1914750 | 1752 | - | 0.509132 |
hdhA | UTI89_C1807 | 7-alpha-hydroxysteroid dehydrogenase | SubName: Full=7-alpha-hydroxysteroid dehydrogenase; EC=1.1.1.159; | chromosome | CDS | 1737529 | 768 | - | 0.471354 |
hlyA | UTI89_C4926 | hemolysin A | SubName: Full=Hemolysin A; EC=4.6.1.1; | chromosome | CDS | 4825022 | 3075 | - | 0.405528 |
hlyB | UTI89_C4925 | hemolysin secretion protein HlyB | SubName: Full=Hemolysin secretion protein HlyB; | chromosome | CDS | 4822828 | 2124 | - | 0.403955 |
hlyD | UTI89_C4924 | hemolysin D | SubName: Full=Hemolysin D; | chromosome | CDS | 4821373 | 1437 | - | 0.395268 |
ibgR | UTI89_C5033 | putative regulatory protein IbgR | SubName: Full=Putative regulatory protein IbgR; | chromosome | CDS | 4934895 | 1950 | + | 0.395897 |
idnO | UTI89_C4873 | 5-keto-D-gluconate 5-reductase | SubName: Full=5-keto-D-gluconate 5-reductase; EC=1.1.1.69; | chromosome | CDS | 4774294 | 765 | - | 0.494118 |
iroC | UTI89_C1121 | IroC protein | SubName: Full=IroC protein; | chromosome | CDS | 1112788 | 3786 | - | 0.576334 |
irp1 | UTI89_C2184 | HMWP1 nonribosomal peptide/polyketide synthase | SubName: Full=HMWP1 nonribosomal peptide/polyketide synthase; EC=2.3.1.-; | chromosome | CDS | 2085201 | 9492 | + | 0.605984 |
irp2 | UTI89_C2183 | putative peptide synthetase-like protein | SubName: Full=Putative peptide synthetase-like protein; | chromosome | CDS | 2078988 | 6126 | + | 0.600555 |
macA | UTI89_C0883 | macrolide-specific efflux protein MacA precursor | SubName: Full=Macrolide-specific efflux protein MacA; | chromosome | CDS | 879993 | 1143 | + | 0.527559 |
mdlB | UTI89_C0477 | multidrug resistance-like ATP-binding protein mdlB | SubName: Full=Multidrug resistance-like ATP-binding protein mdlB; | chromosome | CDS | 484652 | 1896 | + | 0.560127 |
menE | UTI89_C2543 | O-succinylbenzoic acid--CoA ligase | SubName: Full=O-succinylbenzoic acid--CoA ligase; EC=6.2.1.26; | chromosome | CDS | 2509668 | 1356 | - | 0.565634 |
menF | UTI89_C2549 | menaquinone-specific isochorismate synthase | SubName: Full=Menaquinone-specific isochorismate synthase; EC=5.4.4.2; | chromosome | CDS | 2515368 | 1296 | - | 0.532407 |
nhoA | UTI89_C1681 | N-hydroxyarylamine O-acetyltransferase | SubName: Full=N-hydroxyarylamine O-acetyltransferase; EC=2.3.1.118; | chromosome | CDS | 1602737 | 846 | + | 0.503546 |
phnM | UTI89_C4690 | PhnM protein | SubName: Full=PhnM protein; | chromosome | CDS | 4590328 | 1137 | - | 0.597186 |
smtA | UTI89_C0993 | S-adenosylmethionine-dependentmethyltransferase | SubName: Full=S-adenosylmethionine-dependent methyltransferase; EC=2.1.1.11; | chromosome | CDS | 978030 | 798 | + | 0.515038 |
srlD | UTI89_C3067 | sorbitol-6-phosphate 2-dehydrogenase | SubName: Full=Sorbitol-6-phosphate 2-dehydrogenase; EC=1.1.1.140; | chromosome | CDS | 2986130 | 780 | + | 0.532051 |
sufI | UTI89_C3443 | FtsI suppressor | RecName: Full=Cell division protein FtsP; Flags: Precursor; | chromosome | CDS | 3379534 | 1413 | - | 0.558386 |
tam | UTI89_C1738 | putative trans-aconitate 2-methyltransferase | RecName: Full=Trans-aconitate 2-methyltransferase; EC=2.1.1.144; | chromosome | CDS | 1664576 | 759 | + | 0.546772 |
tauD | UTI89_C0387 | alpha-ketoglutarate-dependent taurine dioxygenase | SubName: Full=Alpha-ketoglutarate-dependent taurine dioxygenase; EC=1.14.11.17; | chromosome | CDS | 403279 | 852 | + | 0.545775 |
tehB | UTI89_C1650 | tellurite resistance protein TehB | SubName: Full=Tellurite resistance protein TehB; EC=2.-.-.-; | chromosome | CDS | 1574832 | 594 | + | 0.468013 |
ucpA | UTI89_C2759 | oxidoreductase UcpA | SubName: Full=Oxidoreductase UcpA; EC=1.-.-.-; | chromosome | CDS | 2702507 | 858 | - | 0.536131 |
yafE | UTI89_C0229 | conserved hypothetical protein YafE | SubName: Full=Uncharacterized protein; | chromosome | CDS | 236748 | 771 | + | 0.491569 |
yafS | UTI89_C0232 | hypothetical protein YafS | SubName: Full=Uncharacterized protein; | chromosome | CDS | 239766 | 741 | + | 0.497976 |
ybbO | UTI89_C0528 | putative oxidoreductase | SubName: Full=Putative oxidoreductase; EC=1.-.-.-; | chromosome | CDS | 536324 | 810 | - | 0.537037 |
ybdB | UTI89_C0599 | hypothetical protein | RecName: Full=Proofreading thioesterase EntH; EC=3.1.2.-; AltName: Full=Enterobactin synthase component H; | chromosome | CDS | 613221 | 414 | + | 0.584541 |
ybhG | UTI89_C0796 | hypothetical membrane protein YbhG | RecName: Full=UPF0194 membrane protein YbhG; Flags: Precursor; | chromosome | CDS | 791918 | 999 | - | 0.576577 |
ybtE | UTI89_C2187 | yersiniabactin siderophore biosynthetic protein | SubName: Full=Yersiniabactin siderophore biosynthetic protein; EC=6.3.2.-; | chromosome | CDS | 2096593 | 1578 | + | 0.586185 |
ybtP | UTI89_C2181 | putative inner membrane ABC-transporter | SubName: Full=Putative inner membrane ABC-transporter; | chromosome | CDS | 2075887 | 1803 | - | 0.571825 |
ybtT | UTI89_C2186 | YbtT protein | SubName: Full=YbtT protein; EC=3.1.2.-; | chromosome | CDS | 2095801 | 789 | + | 0.588086 |
ycaC | UTI89_C0970 | protein YcaC | SubName: Full=Protein YcaC; | chromosome | CDS | 952661 | 726 | - | 0.464187 |
ycdL | UTI89_C1074 | hypothetical isochorismatase family protein ycdL | RecName: Full=Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB; EC=3.5.1.110; AltName: Full=Ureidoacrylate amidohydrolase; | chromosome | CDS | 1059103 | 735 | - | 0.563265 |
ycgM | UTI89_C1366 | putative isomerase | SubName: Full=Putative isomerase; | chromosome | CDS | 1301528 | 660 | + | 0.525758 |
yciK | UTI89_C1539 | hypothetical oxidoreductase YciK | SubName: Full=Hypothetical oxidoreductase YciK; EC=1.-.-.-; | chromosome | CDS | 1449301 | 759 | - | 0.523057 |
ydcO | UTI89_C1652 | hypothetical protein YdcO | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1576431 | 1296 | - | 0.525463 |
ydgB | UTI89_C1794 | hypothetical oxidoreductase YdgB | RecName: Full=Dihydrofolate reductase FolM; Short=DHFR; EC=1.5.1.3; | chromosome | CDS | 1721406 | 723 | + | 0.50899 |
ydhJ | UTI89_C1835 | hypothetical protein YdhJ | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1761383 | 900 | + | 0.507778 |
ydiD | UTI89_C1894 | hypothetical protein YdiD | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1818564 | 1701 | + | 0.500882 |
ydiI | UTI89_C1878 | hypothetical protein YdiI | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1800982 | 411 | - | 0.506083 |
ydjB | UTI89_C1964 | pyrazinamidase/nicotinamidase | SubName: Full=Pyrazinamidase/nicotinamidase; EC=3.5.1.-; EC=3.5.1.19; | chromosome | CDS | 1884116 | 660 | + | 0.527273 |
yebH | UTI89_C2020 | ribosomal RNA large subunit methyltransferase A | SubName: Full=Ribosomal RNA large subunit methyltransferase A; | chromosome | CDS | 1932940 | 810 | - | 0.511111 |
yecD | UTI89_C2071 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1977451 | 582 | + | 0.534364 |
yecO | UTI89_C2074 | hypothetical protein | RecName: Full=tRNA (cmo5U34)-methyltransferase; EC=2.1.1.-; | chromosome | CDS | 1979336 | 744 | + | 0.5 |
yecP | UTI89_C2075 | hypothetical protein | RecName: Full=tRNA (mo5U34)-methyltransferase; EC=2.1.1.-; | chromosome | CDS | 1980076 | 972 | + | 0.526749 |
yeeO | UTI89_C2199 | hypothetical protein YeeO | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2109870 | 1638 | - | 0.484737 |
yegM | UTI89_C2349 | hypothetical protein YegM precursor | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2291249 | 1395 | + | 0.534767 |
yegO | UTI89_C2351 | hypothetical protein YegO | RecName: Full=Multidrug resistance protein MdtC; AltName: Full=Multidrug transporter MdtC; | chromosome | CDS | 2295766 | 3078 | + | 0.562703 |
yeiN | UTI89_C2439 | hypothetical protein | RecName: Full=Pseudouridine-5-phosphate glycosidase; Short=PsiMP glycosidase; EC=3.2.-.-; | chromosome | CDS | 2397445 | 939 | - | 0.467519 |
ygcW | UTI89_C3137 | hypothetical oxidoreductase YgcW | SubName: Full=Hypothetical oxidoreductase YgcW; EC=1.-.-.-; | chromosome | CDS | 3052252 | 861 | - | 0.458769 |
yghA | UTI89_C3424 | hypothetical oxidoreductase YghA | SubName: Full=Hypothetical oxidoreductase YghA; EC=1.-.-.-; | chromosome | CDS | 3360485 | 888 | + | 0.539414 |
yhiH | UTI89_C4007 | hypothetical ABC transporter ATP-binding protein yhiH | SubName: Full=Hypothetical ABC transporter ATP-binding protein yhiH; | chromosome | CDS | 3892511 | 2736 | - | 0.563596 |
yhiI | UTI89_C4008 | hypothetical protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 3895243 | 1068 | - | 0.582397 |
yhiQ | UTI89_C4016 | hypothetical protein YhiQ | RecName: Full=Ribosomal RNA small subunit methyltransferase J; EC=2.1.1.242; AltName: Full=16S rRNA m2G1516 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase; | chromosome | CDS | 3904173 | 816 | - | 0.593137 |
yhiV | UTI89_C4046 | hypothetical protein YhiV | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3927193 | 3114 | + | 0.530186 |
yigI | UTI89_C4383 | hypothetical protein YigI | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4269233 | 486 | - | 0.520576 |
yjcS | UTI89_C4679 | hypothetical protein YjcS | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4578974 | 1998 | - | 0.524525 |
yojI | UTI89_C2491 | hypothetical ABC transporter ATP-binding protein yojI | SubName: Full=Hypothetical ABC transporter ATP-binding protein yojI; | chromosome | CDS | 2443287 | 1644 | - | 0.526156 |
yrbE | UTI89_C3630 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3558144 | 783 | - | 0.550447 |