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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

>STY0478 hypothetical protein
MANLHITLELKNADGMATEETLMIPPFGLNTLGIDMQNHDVDPLITPYDL
PLYTQDFCHGIGDIHFTLKSATATINGKNVDLLKADSVHFLDKE
>STY4584 hypothetical protein
MASLITRYFSQQLSDDEKVAALNHFRLTLHELSPFAREPVDLVLWVKASE
VVANDYNPNVMAAGEKKLLQHSLQEDGFTQPVVVSEEKGQYLVVDGFHRQ
LLGRRESGAGKRLKGWLPVTCINPERKGKAERIASTIRHNRARGKHQIAS
MSDIVRDLARLGWADERIGKELGMDRDEVLRLKQISGLTELFEEEDFSPA
WTVR
>STY1537 putative regulatory protein
MDLTQLEMFNAVALTGSITQAAAKVHRVPSNLTTRIRQLEADLGVSLFIR
ENQRLRLSPAGHNFLRYSQQILALVDEARMVVAGEEPQGLFSLGALESTA
AVRIPALLAGYNQRYPKIQFALTTGPSGAMLDGVLEGKLNAAFIDGPLMH
PGLEGIPAYQEEMMIVAPHGHSVVSRASEVNGYNIYAFRANCSYRRHFES
WFHADGATPGTIHEMESYHGMLACVIAGAGIALMPASMLNSMPGHHQVEA
WPLAEKWRWLSTWLMWRRGAMTRQLEAFIELLNAQLASAD
>STY1347 putative regulatory protein
MNSRQQSILQMVVDKGQMSVAELAKITGVSEVTIRQDLNTLEKQSYLRRA
HGFAVSLESDDVETRMMTNYTLKRRLAEFAASLVSPGESVFIENGSSNAL
LARTLAEQKDVTIITVSSYIAHLLKETPCEVILLGGIYQKKSESMVGPLT
RQFIHQVHFSKAFIGIDGWQADTGFTGRDMMRSDVVNAVLEKGSEAIVLT
DSSKFGCVHPYPLGPLSRFHRVITDSKISASDQMQLEHAGLLVNVIGSSV
>STY3538 possible GntR-family transcriptional regulator
MKKIQRTQTRDHITQMLRYEILSGNIKAGEELAQGSIAEQLGLSRMPVRE
ALQSLEQEGFLIRLPNRHMQVAHLEADRVSHIFRVIAAMAAEMFSLIPSE
VGDALLIRAQALAVAEDKSCELECHAMLISYVNNRYLEKVYQQFLDGYVS
YVILHLKKDNQESAQLFAELADVIRQGRRDEIGQVMQRYFLSLAEIMRQH
MKDWESAEA
>STY3044 DeoR-family trancriptional regulator
MIPTERRQIILDMVAEKGIVSIAELTERMHVSHMTIRRDLQKLEQQGAVI
QVSGGVQSSTRVAHEPSHQIKTELATPQKAAIGKLAASLVQPESCIYLDA
GTTTLAIARQLVTMNKLTVVTNDFVIADYLMDNSGCTIIHTGGAVCRENR
SCVGEAAATLLRGLMIDQAFISASSWSVRGISTPAEDKVTVKRAVASASR
QKILVCDATKYGQVATWLALSLAEFNQIVTDDGLPESAIRALAKVDISLL
MAKQ
>STY3156 possible regulatory protein
MMATMLDVSRHAGVSKATVSRVLNGTGQVKESTRQKVFTAMQALDYRPNL
LARSLANRTSNSIGLVVSTFDGFYFGSLLRRASRQAEFHNKQLIVTDGHD
TPEREQKAVQMLADRQCDAIILYTRYMDEPTILSLIDATEMPLVIINRNI
TQAHDRAIFFEQETAAFQAVEYLITQGHRDIACITLPVHTPTGTSRVAGY
RKALEKYGIPWQPAKVKYGDYTLTRGYDACRELLEEGVTFSALFACNDDT
ALGAAKALRQAGLRIPQDVSLFGFDDAPGATWLEPGLSTVYLPIEDMIAT
AIDQAVRLANSEPVAPIPPFTGTLILRESVAAGPFFQRPV
>STY1839 putative transcriptional regulator
MIGLRLDGYDPDLHHDAAVAFCIRARDDELFSPRHQHRKGQLILALHGAI
TCEVENAMWMVPPQYAVWLPGSLPHSNHVTAGAELCFLFIEPAAVVMPER
CCTLKISPLCRELILSLARRTDSERAQMPTQRLIQVLFDELPQQPQEQLQ
LPVSGHPKIRQMVETMAQEHARWNTLGQWASVFAMSERNLARLVVKETGL
SFRRWRHQLQLILALQALIAGRNVQQTAQMLGYDSTTAFITMFKKGLGQT
PGQYLTGELLLSHN
>STY4264 putative ribokinase
MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTR
CHGGAFITLDSLDNVAKNEIAYVLEKYESAQKIKKGLSAMKNNVCVIGSF
NVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITK
VGSDHFSDYAINFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAI
YPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQTIRLAQKNDIP
VIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKII
HQKGVKNTIITLGSKGSLAYDGTQFIYSPAFPAVVKNTAGAGDAFNGALS
SGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQT
ISTH
>STY1855 putative transcriptional regulator
MATFSISAMAAQCGVTTANIRSWERYGLLQPTKDEAGNRFYCIEDAIRIQ
HIIDALSKGFSLKEIKPALYGEETHCRSGWLFYQEEILAQCRKFEPAKLR
KLLWRYGREIPPCIVIESILRPLWLWLSAGDDDARRFEKALLDTAIIEYA
TFQLSSVRKAPAGTMLIAAFSLNDPIELWLETIKYCSEGMRVEVIPWQAP
MPDLLSTSFEHIVLWHDETLTPAQENLIQALKESGKFSLHVKNGSGLTLL
PAVYRQHEMPESMQHVAPQIHANGYEKSGTAR
>STY2522 putative transcriptional regulator
MLESSKVPALTRAIDILNLIARIGPCSAAIIIETLRIPKSTAYLLLNELK
RQRFISLDHQENYCLWTKLVELSGHALSKMDLRELARPRLTQLMDEIGLL
CHLGIIDHENAYYILKVESSSTISVRSHEGKSLSLYRSGIGKCLLAWQPA
AVRKAIIEKMVWERATLTTITEPQQLNDELERIRQRGWSFDNGEDYPDVR
CVAAPVFNARNELTAAISLVGTRLQINEENLDYLAGKAIACAKDISRLLG
WKSPFDSLAS
>STY0186 putative transcriptional regulator
MKGQHRLDLIVAYLKNHTLVTVEQLVEAVDASPATIRRDLIKLDEQGVIS
RSHGGVALRRFEPAQPTTNEKQLRSPAEKRAIARVAASLVNAGDAVVLDA
GTTMMELAKCLTHLPLRVITVDLHIALFLAEFRQIEVTIVGGRIDDSSQS
CIGEHGRKLLRSVYPNIAFMSCNSWGVKTGVTTPTEDKAGLKQEIIANAQ
RKVLLADSSKYGAHSLFNVVPLERFNDVITDVNLPPSAQVELKGRAFALT
LVQPE
>STY1393 putative transcriptional regulator
MKRAIIVSVLEQIEKNLEERIDIEKLVVITGYSRRSLQDFFKEKCGVSIG
KYIRQRKLSRSATLLKLTSQSVTDIAFRMGFDSVQSYSREFKKTFGVNPN
NYRKADFWDLRNLRPPYWLDCDGHYQFEICQLTSKEIFGFQTSHQIATND
LPKKASPIKWKIIHETLRTWGENVYCLSSFKPDNTKDQVIAVSSFFGMEH
NSVDGGKIPMSRVIKCGKYAKFHFVGHKEQYQQFSNTIYMCILPKLNIIR
REGEDIEYFHLASVQKQQNNESIVDLYYYIPVL
>STY2429 putative DNA-binding protein
MKYNTMNNDEIILSLCARLKETRLSLAMTQQQLADRAHVGIATIKRIEKG
GGLNLDTLISLLRALDKLHNLDAVLFESELRNFHESYEGGEGSGRLQVRQ
QAADLNNKSSAPQSEEVNYSAALENSLCW
>STY2660 putative transcriptional regulator
MNYSLRQLRIFITVAQAKSFSRAGDRIGLSQSAVSHSVKELERQTGVRLL
DRTTREVVLTEAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAAS
QTISAHLIPQCIAQSNSLYPAIDFVLHDRPQQWVLESIRQGEVDFGIVID
PGAAVDLQCEAILSEPFLLLCRQDHPLAHQEWVSWQDLKQASLVLQDYAS
GSRPLIDAALAHFAIEADIVQEIGHPATLFPRVEAGIGISVLPALALPLP
QGSHLQVKRLTPVVERQLMLARRKNRSLSTAAQALWDVVRTQASELTAAR
AKDPLYQL
>STY0622 putative tetR-family transcriptional regulator
MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFAT
KDELINTLYLHLKQNLCQSMIMELDRSITDAKTMTRFIWNSYISWGLNHP
ARHRAIRQLAVSEKITKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAF
GDGLFLALAETTMDFAARDPARAGEYIALGFEAMWRALTREEQ
>STY0017 hypothetical protein
MKTYIINSNCIYNEGKYELRTVSNSQVIKMTAMRAKCLSFIIENAHLEII
ERQKITTALWGSRSHYVNDANLTQILYLIRRDLKALGINDLFITIPRQGL
KVNSDIAIIATDSETKGRKKQIVRQTIAALTTVFSVTLGSLMYLHIH
>STY3354 probable two-component system response regulator.
MRILLVEDDTLIGDGIKAGLSKMGFSVDWFTEGRPGKEALYSAPYDAVIL
DLTLPGMDGRDILREWREKGKQEPVLILTARDALAERVEGLRLGADDYLC
KPFALIEVAARLEALVRRASGQASSELRHGQVTLNPGNLVATLAGEPLAL
KPKEFALLELLLRNKGRVLPRKLIEEKLYNWDDDVSSNAVEVHVHHLRRK
LGSEFIRTVHGIGYTLGDA
>STY1991 putative acetyltransferase
MDIQITHQVTEFDKEELLAGLRSYNAQFVDFSKNGQLGVYCRNESGEMVG
GLIADRKGPWLCIDYLWVSESARSRGLGSQLMEMAEKEGLRKGCVHGLVD
TFSFQALPFYEKQGHILQMSLPDFPKVGSQRHYLIKPDL
>STY1400 conserved hypothetical DNA-binding protein
MTKKVNLSTTAGADVSTINEAVSQRIKQFRSQKKMSLDELARRSGVSKGM
LVEIEGCKANPSIALLCKIAAAMGVSVADFVNVASEPMVHLINRDAIPVL
WRGEKGGSAKLMAGTSGPDMLELWQWIMHPGEQFESAGHPADTCELLFVN
QGTLTLTVDGRRFIIREGCSAVARTDMPHAYVNDTNEVLEFTMTVNEKSR
>STY4819 regulatory protein
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVARETGERIAQIMEEINYI
PNRAPAMLLNAQSYTLGVLIPSFQNQLFADILAGIESVTSGHNYQTLIAN
YNYNRDSEEESVINLLSYNIDGIILSEKYHTLRTVKFLRSATLPIVELMD
IQGDRLDMEVGFDNRQAAFDMVSTMLDKRQRRKILYLGSKDDIRDEQRYH
GYCDAMTRRGLAPLRINPRAISSIHLGIQLMRDALTAHPDVDGVFCTNDD
IAMGALLWCRERQLAVPEQISIAGFHGLEMGRQMIPSLASVITPRFEIGR
RAAQMLLNKIKNNDLNHNTIDLGYQIYHGNTL
>STY1856 putative regulatory protein
MTGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIVFDIDDY
YTVQQYITSTFKTVLIGIVTHNEYNFIDEHHAIYRIKVDASIAEWRELLI
LAAAGQFFPRSEKVRLTANERNVLAMLVKGMDIRQISCELNVHLKTIYSV
RYHVLTKLGCRTVLDYQILSVSKAFTHWLTINNVDNVIFRVNSKVIA
>STY3165 possible regulatory protein
MRYSPEALMAFVEAVSCGSFSAAARRLRKSQSTISTAIAHLEADLGFSLF
DRSSRQPVLTEEGKRVLSYVQAILSASDRLDEVALTLSGETETRLTFVLS
DTLHPDSLEELMAQFDRQFPHTEFECLIGENDDVIDLLQKGRAQIGLIEA
RDNYPTDIGATRLLVQSWMGVYVATTHPLASQTNLQWEQLHTWRELRLNT
YLDSNANITRGPAWSAPNYLLLLSMAVQGFGWCVLPCALVEEFAAEKPLA
QLDVPGWPRAIAIDLLWNKKTPPGTAGNWLRYHLQQK
>STY0036 putative transcriptional regulator (lysR family)
MRPIKNAKKIDYNLIKVFDTVITEGNATRAARKLDVTPAAISQALLRLQN
LYGEELFIRTRKGLVPSSKGKSLHQVFRQAIESIESTLCDKTDAQESNEL
IVLGSDITENYYFPALLDTVLMNRYIIKHYAIKKTGEYSPASMLTHGYAD
IIMGILEIKNEMIESFLIDNLSDFVCVCGEKSPLVGLEKMSLYNFYAARH
AVYHSDMFSSFNADSIDLFKSSTPYAGRREIGYYSDSLFGVIGVVEKSDM
VAILPGKIATYFRDVRRYNIKILRMPDEIIFRTLPVYAYLATNSTHYKNA
KKLISTFQSTFLFSQEKQPDALVEGSTSLCD
>STY4801 putative transcriptional regulator
MKEYDDYSAKEQQQLAVCQRLISEKSYLSQEEIRRDLQNEGFEGISQSTV
SRLLKLLGAIKIRNAKGQKIYSVNPQQRPSPDAGRSIAEMVVSVEHNSEF
ILIHTAAGYGRAVARILDYHALPEILGVVAGSSIVWVAPQVVQRTALVHK
QINYLLKMNLNS
>STY1685 putative TetR-family transcriptional regulator
MNKQTEHDTREHLLATGEQLCMQRGFTGMGLSELLKTAQVPKGSFYHYFR
SKEAFGVAMLERHYACYHQRLTAHFTSGPGNHRDRLLAWYQETLKQFCQQ
GAISGCLTVKLSAEVCDLSEDMRSTMDKGAQEIMALLARALEDGRNSHCL
HFTGQPLPQAQVLYALWLGANLQAKISRSAAPLENALAHVKTIIATPEQ
>STY3037 possible LysR-family transcriptional regulator
MTVKELAMLNLQRMSLFVAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKE
LGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGE
LRITTTPEFGEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAI
RLGSLADSRYRAALISRFTILPVAAPQWLARHPVSSLESLAQAEWIIHER
LPTPLRWTVTNNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQ
WLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQ
WDCGEHAPSL
>STY4115 putative sugar kinase
MQQYIGIDVGGTHVKYGVINSDGEELTHHQFDTPEDASTFTRKWQDVVAR
CQQDYDIAAIGVSFPGHINPHNGHAAKAGALAYLDDVNLMELFSGLTDLP
LVVENDANCAALGEMWRGAGQHYDNLVCITIGTGIGGGIIVGRELYRGAH
FHAGEFGVMPVGNNGESMHKIASTSGLMASCRQALALPAEEMPPADVIFE
RMATDVHLREAVNDWARYLSRGVYSVISMFDPGVVLIGGGISEQEKLYPL
LTRHLETFEMWEALQVPIQPCQLGNQAGRLGAVWLAQQKLDRR
>STY2410 putative transcriptional regulator
MANWAQKLKLHHLQTLVALGEQGNLTHVARMMNISQPALSKWLSQLEDEI
GITLFERHSKGLRPSEGGKLLLQHAQRLINDLERSQYEIARFKQGGLVGS
LKIGCSPVATDCVSQAILSLLNEMPTLHLNIEEKVMTPLLHDLLAGQVDV
VVGRVGGRALQLPLNYQVLYTEPVCFVARPHHPLAARAQIAWSDLAHWRW
IVWPTGTPIRISIDNALVDNGVMLPENTIESASMNVSTNLLQSSDMISIL
SLRLAQRYASQGQLAILNLPKIEQKGSVGMFWRKNETPSLALSRFLYFLA
QV
>STY1260 putative ROK-family protein
MYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVAEA
DQRFGVKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDV
RLDNDANCFALSEAWDDEFTQYPLVMGLILGTGGGGLVLNGKPITGQSYI
TGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHY
YDQSLQAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVI
GGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLHL
TD
>STY3944 putative LysR-family transcriptioanl regulator
MNLTIRQFRAFLAVADLRSFTAASKYLCITQGAVSGLINEMESQMEVSLF
DRTSRVVKLSPDGEKFLPAAMRVVEEFQRAENYARDLKEIKKSLVRVVGA
PLIACAFLPQIIHAFKRQHPHTHVQLIDKPMSQLQKSIMLGEADFGIGPE
RPLEPEIDKQTLFTTEIALYCHPDYRLHKKTVRWEEIQSEELIAVGNESV
PMISATAGVRIKPKMTVEHMATAMSLAAQCEGVVIAETFSRHYAKSYQLA
TCSLTPPLRRNMNLYFHAWRAQTPATQRFKEFLFRYMDEHHDALASQRRA
GD
>STY4265 putative acetyltransferase
MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSLEMWQARLTEQAG
VKQLVACIDDIVVGHLSIQVTQRPRRSHVADFGICVDARWHNRGIASALI
RTMIDMCDNWLRVERIELTVFVDNEPAVAVYKKYGFEIEGTGKKYGLRNG
EYVDTYFMARVK
>STY1466 putative regulatory protein
MKKYQRLAEQIREQIASGVWQPGDRLPSLREQVASSGMSFMTVGHAYQLL
ESQGRIIARPQSGYYVAPHPVCRSVATAAHVIRDEAVDINTYIFEMLQAS
RDTSVVPFASAFPDPRLFPLPQLNRSLAQVSKTETAMSVIENLPPGNAEL
RYAIARRYAQQGITVSPDEIVITAGALEALNLSLQAVTAPGDWVVVENPC
FYGALQALERLRLKALSIPTDVKEGIDLMALEQALQEYPVKACWLMTNSQ
NPLGFTLSAEKKARLVALLTHHNVTLIEDDVYSELYFGREKPLPAKAWDR
DDTVLHCSSFSKCLVPGFRIGWVAGGSHARQIQRLQLMSTLSTSSPMQLA
LVDYLSTRRYDAHLRRLRRQLAERKQQAWQTLLRHLPAEVKIHHNDSGYF
LWLELPEQLDAGELSAKALEHLISIAPGKMFSTSGAWTRFFRFNTAWHWG
EREEQAVKQLGSLIREMLSAKSLV
>STY4468 lysR family regulatory protein
MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIR
DGRKLLLTDTGRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPM
VGMLMAGPISLFRQRYPGVELKISEFGGLTVQQAVMNGELDVAMTALPVE
EASGLTTLSLFSHPLCVLVPRSGQWTTCDSIAPEALAEHPLLIYNEDFAL
SRQLMTLFSQHDVKPRIAVRSGQWDFLAAMVQAGVGIAILPEPICQRLDK
ATLRWLPLESDLRWQLGMIWREGVYLSHSARAWLTCCEGFWLKQP
>STY1020 putative DNA-binding protein
MNFGERLQRVLNETGITQSELGRRVGATSQSVNGWCQSGILPRKDILELL
PKATGKPLYWFFMEDDDESDVPERLTQGGPTDLNDRQKRLLEIFDQLPTV
EQDRFIELAGTRLQELDDFMAEYQRRRKIEPPSR
>STY4787 putative BglB-family transcriptional antiterminator
MCVSYSLSSGRVSANHEERDVRFPNQRLAQLFAMLQNETLPQDELAQRLS
VSTRTVRADIAALNMLLTPHGAQFTLSRGNGYQLKIDDPARYQSLQTQQS
PTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVSRATLQNDMAD
VREHLLRYHLTLETRPRHGMKLFGGEMAIRACLTDLLWTLVQQEPSHPLI
VSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREG
YPLSECVAEEVDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQ
VQEIAPSAINADDEEALVHYILNFINTQYNYNLLNDKQLHADLLTHIKTM
ITRVRYQIMIPNPLLENIKQHYPMAWDMTLAAISSWGKYTPYTISENEIG
FLVLHIGVGLERSYNIGYQRQPQVLLVCDAGNAMVRMIEAVLARKYPQIE
IARTLTLRDYEARDSMVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
KLVLVDRTRPWMLDKYFDASHFRIVEGEINQQTLFKTLCDQLHEEGFVDA
AFLDSVIEREAIVSTLLGDGIALPHALGLLAKKTVVYTVLAPQGIAWGDE
TAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACQNFTQFKTVA
MECVSRF
>STY2605 putative DNA-binding protein
MEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAE
RIIADALGITPQEIWPSRYGDMQIKNDADIAE
>STY4201 gntR family regulatory protein
MIEQPDSKSAKPLYKQLEDALKEAIARGEYKPGQQIPTENELSVRWQVSR
VTVRKALDALTRENLLTRVSGKGTFVSGEKFQRSMTGIMSFSELCQSQGR
RPGSRTIKSVFESVDDETKALLNMNDGEKAVVIERIRYADDVAVSLETVH
LPPRFAFLLDEDLNNHSLYECLREKYHLWFTHSRKMIELVYASFEVAHYL
GVNEGYPLILIKSEMIDNKGELSCVSQQLIVGDKIRFTV
>STY1521 putative regulatory protein
METTGGCFSLSCTVINYHDHQRQDGMLNPFKIPWIWIGGRMVIPEVRQER
LYQKIANLIIKLINDNIFPPGTFLPPERELAKQLGVSRASLREALIVLEI
SGWIVIQSGNGVIVSDKKHLASDYTIEEILSTRELVDSHCARLAAQNDNV
DVINQIEAIYHRMDQAINDNNVHGFYSLDKEFHLAISEASRNRVLFDMSR
MLWEQRINIPYAGLDEQSGDRNVLLNLNKQHKAIVDAMRQSDADSAYEGS
LEHLRYVRKIVGG
>STY1576 putative regulatory protein
MYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGS
RGRPAVGLMVETEAWHYLSIRISRGEIFLALRDLSSKLVVEECLALPLNE
ATPLLERIITHVDRFFTRHQQKLERLTSIAITLPGIIDTENGVVHRMPYY
EDVKEMPLGDALERHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVI
DHNVGAGVITDGHLLHAGSSSLVEIGHTQVNPYGKRCYCGNHGCLETIAS
VDSVLELTQLRLNQSISSMLHGQPLTVDSLCQAAMQGDLLAKDIISGVGA
HVGRILAIMVNLFNPQKILIGSPLSKAADILFPAIADSIRQQALPAYSRN
TVVESTQFTNQSTMAGAALVKDAMYNGSLLIRLLQG
>STY1390 putative transcriptional regulator
MTTKHSRTPGRPRQFDPEQSIETAQHLFHSRGYDAVSVADLTKAFGINPP
SFYAAFGSKLGLYTRVLKRYRMTDAIPLGALLRHDRPTAKCLIDVLMEAA
RRYAADPDATGCLVLEGAHCNDKPAREAACEFYIAAENLIRTYVAMRYPQ
EADRTTDFMGTLMAGLSAKARAGYSLERLQESVLLAGDVLERLLPD
>STY1253 putative TetR-family regulatory protein
MTTDTTSCAKKSRGRPKVFDREAALDKAMTLFWQHGYEATSLADLVEATG
AKAPTLYAEFTNKEGLFRAVLDRYITRFASKHEAQLFCEEKSVESALEDY
FTEIAACFTSTDTPAGCFMINTSATLAASSRDIARTVKSRHAMQEQTLIQ
FLRQHQERGEIPAHCNPQALAEYINCILQGMSISAREGATFEQLMQITRT
TLRIWPELLKS
>STY2066 putative regulator
MEKENEKIAASRLNDKIAMRLKERRQKLGLSQGKLAEICGWTQSRIGNYE
AGSRNVGVHDAVVLGKALGISPPELLFGEQESSELWLNESQRKLLELFNQ
LPGSEQQRMIELFEVRLKEIDEYVEKYLRGRLKDNPPPE
>STY4779 hypothetical protein
MRRVDNGAVKHDAGERINELAEQVLTQVDGLLGRHHIVPNAVQTQMLTSH
VRAMAHRSITGEPLPEVDASLFDEISAESMALAREIVAAFGNLPDEEAWL
LSVHFEVAKDNL
>STY1578 putative regulatory protein
MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLL
ARTNRSVALTAAGRQFLADSRHILSLVNDAAARAERLHQGEAGEIRIGFT
SSAPFIRAVSHTFSLFRQSYPGVHMQTREMNTREQIAPLNEGVLDIGLLR
NTPLPDTLNREVILHEPLMAMIPREHRLAQKPVVSLTELAEEPFVFFDPH
VGTGLYDDILGLMRRYNLSPTITQEVGEAMTIIGLVAAGLGVSILPASFK
RVQMSEMRWVPLAEEDAVSEMWLVWPKHHEQSHAVQRFCQLLLLAARQD
>STY2278 putative transcriptional regulator
MKPLLDVLIILDALEKEGSFAAASAKLFKTPSALSYTVHKLENDLNIQLL
DRSGHRARFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVD
DTFPFSLLAPLIDAFYQRHSVTRLKFVNGVLGGSWETLTQGRADIIVGAM
RAPPPDTGFGFARLGDLELVFAVAPHHPLVHEEEPLSRQTIKRFRAIVVG
DSVHSSRSIGSELLDAQEAITVFDFKTKLELQISGLGCGYLPRYLAQRFL
ESGALIEKKVVAQIVYEPVWVGWNEQTAGLASGWWRDEILANNAIAGVYA
KSPV
>STY0035 hypothetical protein
MRQYTINNEFIYNESLREIISLHDKKVLKVTLMRARCLSYLFENAYKKLI
TREMISHAVWGERSQFVSDANLTQLLYLLRRDLQQIGLFELFVTLPRQGI
KIDERFIIDAADIPPQAIQYHTHRCNKIISIGIPTLFLLIVLFFLAPFI
>STY4154 putative DNA-binding protein
MHFTIPLCDLQEFSMEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFT
EFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKLMRLIQA
NPRLSKQLMEQFLPLSVLTVLRKGRFPRPITGLEK
>STY4292 putative transcription accessory protein
MMNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDD
TQLRNLETRLGYLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTEL
EDLYLPYKPKRRTRGQIAIEAGLEPLADLLWNEPSHDPDVKAAKYIDGDK
GVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVATVVSGKEE
EGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLNADPQFDEPPK
ESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGK
LVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLD
VQKQFPNVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT
ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC
AGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHL
KAADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFADGVETMNDLLP
GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSTKFVDDPHTVVKAGDI
VKVKVLEVDLQRKRIALTMRLDEQPGETAARRGGGADRAQGNRPASKAAK
PRGRDAQPAGNSAMMDALAAAMGKKR
>STY4668 hypothetical protein
MISAPEPLHAGHILTPFCCGVDSMDNWLKQRAMKNQVTGASRTFVCCGSD
SDVLAYYSLASSAVTTNTAPGRFRRNMPDPIPVVVLGRLAVDRSLHGQGV
GRALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPM
MLMVTLGDLVHA
>STY3997 putative GntR-family transcriptional regulator
MKTLSKSSHIPLYQQVVEWIRESIYSGELVEDDRIPSEFQIMDMLEVSRG
TVKKAVDQLVREGVLVQVQGKGTFVKKENVAYPLGEGLLSFAEALASQKI
NFTTSVITSRLEPANRFVAEKLSIKPGQDVLFLKRLRCIGDEKVMLIENR
INIDLCPGIIDVDFTRENLFSAIERLSDKKISFSESRYAAKLIGNERGHY
LDIGEDAPVLHLEQLVFFSRGLAIDFGNVWLKGNKYYLGTILQRLDA
>STY4151 putative acetyltransferase
MGRVTAPEPLSAFHQVAEFVSGEAVLDDWLKQKGLKNQALGAARTFVVCK
KDTKQVAGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDLSFHG
KGLGADLLHDAVLRCYRVAENIGVRAIMVHALTEDAKNFYIHHGFKSSQT
QQRTLFLRLPQ
>STY4515 araC family regulatory protein
MLKVFNPSPVQVGSIECLQSAQNWQRKSLSLQGLNLLQSVLIKLTTGKIS
ITTSSGEYITASGPMLIFLAKDQTIHITMEETHEQLNYNLIELDSASIKN
AYNFFLYEHADFSAPLTKPTTKHLLAPIETGVARVFNLLHSSNKSQKLSQ
DKKEYLIRFLLSEFIYEPEAFALFRELSQNTLAENIYNIIISDISRKWAL
KDISDSLYMSCSTLKRKLKQEHTSFSEVYLNARMNKATKLLRNSEYNITR
VAYMCGYDSASYFTCVFKKHFKTTPSEFLAFLSSSRHQYVN
>STY4867 probable transcriptional activator
MDVTGAGLHNIETKWLYDFLTLEKCRNFSQAAIIRNVSQPAFSRRIRALE
HAVGVELFNRQVSPLQLSEQGKIFHSQVRHLLQQLESNLTELRGGSDYTL
RKIKIAAAHSLSLGLLPTIVKQMPTQFTYAVEAIDVDQAVDMLREGQSDF
IFSYHDENLQQAPFDNIRLFESRLFPVCANNGRGEPRYTLEQPHFPLLNY
SQNSYMGRLINRTLTRHAELSFSTFFVSSMSELLKQVAMDGCGIAWLPEY
AIRQEITDGRLIVLDADELVIPIQAYAYRMNTRMSQVAETFWRDLRGLQA
AL
>STY3547 probable LysR-family transcriptional regulator
MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLN
RSTRSIGLTEAGKIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSS
TMAQNVLAGLTAKLLKEYPGLAVNLVTGIPAPDLIADGLDVVIRVGALQD
SSLFSRRLGAMPMVVCAAKPYLAQYGVPEKPADLSSHSWLEYSVRPDNEF
ELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGTGIAYVPLMWVIDEINR
GDLEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINALTDYFVDVAHLFQ
GMHGRGKEK
>STY4518 Putative acetyltransferase
MISTPEPLHAGHILTPFCCGVDSIDNWLKQRAMKNQTTGASRTFVCCGSD
SNVLAYYSLASSAVTTNTSPGRFRRNMPDPIPVVVLGRLAVDKSLHGQGV
ARALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYQWVGFVPSPMDPM
MLMVTLGDLVESV
>STY3461 ATP-dependent RNA helicase (dead-box protein)
MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALTDLGYEKPSPIQ
AECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPT
RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTP
GRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT
ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKN
EALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQAL
REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRI
GRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRR
LEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELDLETLAAALLKMAQ
GERPLILPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREERPRRERRDV
GDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAVPHAGGERRGGGRSFSGERR
EGGRNFSGERREGGRGDGRRFSGERRESRGPRRDDSTGRRRFGGDA
>STY3537 possible transcriptional regulator
MLRKAILSRELVEGQEITLEGIAGMVGVSSMPVREAFQILAADGLIKVRP
NKGAVVLGINEQTIREHYEIRALLESEAVAKASRPGTDISRIAEVHYAAE
KALAENNSAEYSDLNQAFHMEIWNVAGNEKMKMLLCNMWNGLSMGHKVTE
EEYAVISIQEHKSILQALELHDETLARQRMREHIIRSMENMLTRYVGDPS
A
>STY1730 putative transcriptional regulator
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQAL
SILDWVRKGVPISQVKPLLSRPVIRLGDNWITIQETMLQHLHEGRIDALR
QLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTS
FCLEGDRKAPGNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAV
LAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVITL
>STY2374 putative gntR-family transcriptional regulator
MEQAHTRLIAQLNERISAADNTPLYMKFAQTVKDAVRSGILEHGNILPGE
RDLSQLTGVSRITVRKAMQALEEEGVVTRARGYGTQINNIFEYSLKEARG
FSQQVVLRGKKPDTLWVNKRVVSCPDEVAQHLAIPAGSDVFLLKRIRYVD
EDAVSIEESWVPAHLIHDVDAIGISLYDYFRRQHIYPQRTRSRVSARMPD
DEFQSHIQMDGKVPVLVIKQVALDQQQRPIEYSISYCRSDLYVFVCEE
>STY0395 AraC-family transcriptional regulator
MSPISCHSSAAPAMKKIFSVSDFIAFGERYGIDYRFPALPQYTQSSPVLH
GDIEEIALPGGICITRSDVHVLQPYETTSRHSSPLYMLVVLEGNVALAVN
EQTFLLSAGMAFCSQLSEQQTIRAHHGADSKLRTLSLGMYPDGGWRERLP
VSLADEWERSAASARVWQVPEFLLSGLRYAQQPGPHAASRQLMLEGIMLQ
LLGYALNLCQPATQKRGLPVTGEYQRLELIRRLLEQTPEKAYTLNELARR
AAMSPSSLRCKFRHAYGCTVFDYLRDCRLARARRYLMEGYSVQQAAWMSG
YQHATNFATAFRRRYGCSPGELRDASLTASRHCA
>STY1459 putative DNA-binding protein
MDNLTHYLATTLRTLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVA
TLWKIATGLNVPFSMFISPPQAEFPPTFDPQQQAMVITPLFPWDPELCFD
YFSLLLAPGAVSESTPHKAGVIEHVVVIQGRLDMCTGGVWQTIDAGKGLR
FAGDTAHTYRNSSDQTVHFHSLIHYPRD
>STY2996 AraC-family transcriptional regulator
MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKNLYVSSF
TLVCFRSGKLTISNNHDTIYCDEPGMLVLKKEQVVNVTLEEVNGHMDFDI
LEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLK
TAFSCTKDTSKGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIIL
SSAQITLKKRVYNIISSSPSRQWKLTDVADHIFMSTSTLKRKLAEEGTSF
SDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTP
STFIKMANH
>STY4901 conserved hypothetical regulatory protein
MMSTIGIKGLFDAMPDCRHTLHIFSKPSAFYKAALKTPFSAVIFSLSALR
TERRTGLSSLTELAINYPHMRRLVIADDDAEARLISALSPLPLDGVISKA
SPLDVLQDALFTSLNSARRTTERTDNLWELHQNCMLSPTEREILRFMSNG
YSMPQIAVQLERNIKTIRAHKFNVMSKLGVSSDAGLLDAADILLYLRAGD
ATALQHRV
>STY2510 putative transcriptional regulator
MTLTQIHALLAVLEYGGFTEASKRLYMTQSAVSQAISALEEELGVDILIR
ERRKEIELTAAGSRIVRHLRAIQRDVNAVKEIVEQEKKNPARTLRIGCFP
SACACILPGVIRYFESHHPNVKIIPYEENSTAIIDSLQDGSIDAGFVPFP
VNGMYCVPIYRDKFTVVVPENHPLAANSTVTVEELMDEPLIVSKGRYELS
IMALFKEKGIEPIFKYEFNHPDTALNFIRQGLGIALLPELTLKATTGKLC
SVALEPTFYRQISLLAKEPPVEGSPLFLLQKCMETLTDEGLL
>STY3888 hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region
MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVS
RTAVREAVKTLTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEENF
HQVVDHFLVMRISLEPQACLLAATLGTPEQKARLNALMEEMVALKKHFKR
ERWIEVDMAWHEHIYEMSANPFLISFATLFHSVYHTYFTSITYNEVVKLD
LHQAIVDAIADGDGERAFQACQALLIAPNERPDN
>STY1551 putative regulatory protein
MTVETQLNPTQPVNQQIYRILRRDIVHCLIPPGTPLSEKEVSTRFNVSRQ
PVREAFIKLAENGLIQIRPQRGSYVNKISLSQVQNGCFVRQAIECAVVRR
AAAMITDNQCYQLAQNLHLQHIAIERKQIDDFFQLDDDFHQKLAQIADCQ
LAWDTIENIKATIDRVRYMSLDHVSPPEMLLRQHHDIFSALENRDGNAVE
SAMTQHLQEISESVQLIRQENSGWFSEE
>STY1951 putative ATP-dependent helicase
MTDDFAADGQLAKAITGFKPREPQRQMAVAVTQAIENAQPLVVEAGTGTG
KTYAYLAPALRAGKKVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALL
KGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTRDGDISTCVS
VAEDSQAWPLVTSTNDNCLGSDCPLYKECFVVKARKKAMDADVVIVNHHL
FLADMVVKESGFGELIPQAEVMIFDEAHQLPDIASQYFGQSLSSRQLLDL
AKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA
DSRIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRSRLKRLK
EINQPGYSYWYECTSRHFTLALTPLTVADKFKEVMEQKPGSWIFTSATLS
VNDDLHHFTARLGIEQAESMLLPSPFDYTRQALLCVPRNLPQTNQPGAAR
QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSK
GQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLL
KARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR
LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSAE
>STY1446 putative regulatory protein
MSQQRPDRIKQMLHYLWQHRHLSTQQAIELFGYAEATVRRDFHYIASRYP
GMVRGHGCIDFDDSTEDKEYVFDVKRTLQSEAKREIAALARTFIKDGDCF
FLDSGSTCLELAKCLVDAKVKVICNDIKIANELGGFPHVESYIIGGLIRP
GYFSVGESLALEMINAFAVERAFISCDALSIETGITNATMFEVGVKTRII
QRSREVILMADHSKFDTVEPHAVATLSCITTILSDSALPSAIARRYQQAG
CRLIMSDPSSGAR
>STY0648 hypothetical protein
MQHRLTTEITHFLSGLPEEERIAAINEFRRAIHNVSPFRDEPVDCVLWVK
NDHISPNDYNPNNVAPPEKKLLLKSIEKDGFTQPIVVVKANTEEYEIVDG
FHRHELGKGKAVLKRRLKGYLPVACLDRERHERMAATIRHNRARGRHQIH
AMSEIVRELSQLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSR
AWTVK
>STY3093 hypothetical protein
MFLTYISFQVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYR
TQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKV
KTGMIKPDENGKINAKGQ
>STY4828 phage DNA binding protein
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISR
EAFPKQISLGGKNVAWAQSEITAWMTDRIATGVMTHDDDHSANSPFFWLA
SFYRFQV
>STY3832 putative DNA-binding protein
MNVGCFMTQPISVIARSLVRERQQTGLSLAEIARRAGIAKSTLSQLEAGN
GNPSLETLWSLCVALDIPFARLLEPQVQKTQVIRRGEGTKVVAEQAHYQA
ILLAACPPGARRDIYLLLTQPGADRISHPHPPGSVEHIIVTQGKALVGLT
EAPEELAEGDYICYPGDQAHIFKALEPDTQAILVAEQN
>STY4900 conserved hypothetical regulatory protein
MLPGCCKNGLIISKTPLIQEGLKGAITGNFPDYKLAYCRTIEELTLLQLR
RSNLVIADLAVNNASPRAICEYFYSLISQYRDIHWVFLVPKSCYPHAVDL
LMGPVSTLLSDEEPIENLISVIHAGNARSERISKTLLSPQVPSEIQQSHD
RPIVLTLSERKVLRLLGKGWGINQIAALLKKSNKTISAQKNSAMRRLSIH
SNAEMYAWINSSQGARELNLPSVYGETMEWKTESAREMLRS
>STY4118 putative transcriptional regulator
MLELSITLPIKVQNGGLFISRGIGRHPARRLQSWEIIFVEKGCLKIQEEC
VFCVEAGESLLLWPHRRHIGVEEFPADLKFYWLHFEVKAPDSDPRWLTHL
SVPQHTQVADPQALIALFRQFMNEQEKHQRSPALEFIVLLILQQLTVDAR
QNENAEAAGVSLAWKAQQLIRTHYHLPLSSAVLAKELHCNVDYLGRVYRR
VFHLTLTEAIHRQRVREAEKLLISDARSLKEVAERCGFNDVGYFRQIFRK
HTGLTPTAWKRRYSKEHVNS
>STY3335 probable AraC-family trancriptional regulatory protein
MIKKWRVMNREAICLQLADKINHLKNNDKIISERLAGIRLLYGVEPGPRT
PVMYQPGIIFLFSGHKIGYINKRKFRYDANEYLLLTVPLPFECETWATPE
VPLAGIRLDIDVLQLQELLMDIGEDERFQLPMAASGINSATLSDEILCAV
ERLLDVMERPLDARILGKQIIREILYHVLMGPRGGALLALVSRQTHFSLI
SRVLKQIEMKYTENLNVEQLAAEANMSVSAFHHNFKAVTSTSPLQYLKSY
RLHKARMMMIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM
RTMQGS
>STY4843 putative gerE-family regulatory protein
MASALTAFPEDGDISRIWYDRLCIEFNSDGGLSPAELRVIRLLLQGYNCG
QIAALCFRSVKTISAQKGLAFRRLGVRNDATLLPTLMLLGMVTLYTDLNR
CHSLEESGPECGSEAG
>STY4823 protein kinase
MRKTKMKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKDG
EEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDL
NYNPSESHPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKI
LDFGLARTSGTEAFTHSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLV
LDLFGIEKPDELYEHPPAAITNIPELGKILPKDLARTFISCLSHDKYARP
AMSSVRDQIAKYLLKDRHRALFVLNGKKYEINAKNKSVTITWGTSGSMEI
VYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLINEKSRSFVTFDI
SRPEVIS
>STY4058 putative regulatory protein
MNLLQMDMNLLKVLYVLLETSSTGKTAQKLALSPSAVSHALMRLRDALND
PLFRREGNRQIATPYAQALRDKLAPVFVSLNEELFGDKENGSRCFRVVLP
PALNALLTPVLAEKGHLHQAVIECLPFARRPWRDELLDSSVDLVLAIGDH
QKQVSALHYERVGTTRLIAVYGAPLRSRLENAAALNFADLQHYQHIYCLP
WTKENNELDRQQARAGFERPLAFVCHDYSQLAPAVQSAPLMAIVPRPWYE
NLSDKRGLFVLPLAGEQAEGAIFMQYRASTVEWKRRLIDAIRRKLKTYYR
>STY1490 putative regulatory protein
MSYLNRDERREVILQAAMRVALAEGFAAMTVRRIASEADVAAGQVHHHFS
SAGELKALAFVHLIRTLLDAGQVPPPATWRARLHAMLGSEDGGFEPYIKL
WREAQILADRDPHIRDAYLLTMQMWHEETVTIIEQGKQAGEFTFTANATD
IAWRLIALVCGLDGMYVLGIPEMADPAFKYHLDRMITLELFA
>STY4100 putative lacI family transcriptional regulator regulator
MMNNARINQPIFAGASDVKRTKSPRAPTLEDVARSAGLSPMTVSRALNSP
QLVRPKTVEKVMQAVRVTGYIPNALAGGLASRRSKLIAVVVPQINNNMFV
DTIQSLSDELARRGYHILLCVAGYTEQTEAELVATLLSRRPDGVVLTGIH
HTIELKKVILNAAIPVVEIWDLTPTPLDMLVGFSHEKVGQATGEYLLSKG
YRRPGLLWTADRRAAQRKQGLCSVLQRHAIHAVPQVDVPLPASLSLGRSG
LSQLFDEGTFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIGFGDLDFA
ASNRPSITTVSVDRRAIGQRAATLLADRIEQKPCAEAIVDIGFHLIERES
A
>STY1106 putative transcriptional regulator (pseudogene)
MHIRHQDLTTAEVRSSHLHRLHRVTLFSAAICHITQGSKVIIQDDSRLVA
GPGELIIIPANTPLENQPAQNGFRSDLLLLSPEIIARFKTMYVQDYPPAN
LTSLCTPMSRSLTFMWENVLDAVRQGLPVGLQEHQAMGLLLALLHDGAAG
PLLIERRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQRES
QSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYG
CLPSQVR
>STY4514 putative GerE family regulatory protein
MRYLTMQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSC
SNLLDRNIKTISTQKRSAYKKMDITTDVELIHLMLNEFYISVDIT
>STY2591 putative transcriptional regulator
MASTNQELASALRMFSRFFDLIHQPLAVINERGEYVYYNQESADLDGYSI
ERAMGKHMLDVYPGMKETQSTMLSSLKKGVEYIGHYQIYYNARGQAVDYQ
HTTASLYASDGGMVGVIEIGRNMSGVRRLQEQVVELNQLLYADHHEKHHA
IITENPEMLSNIAKAKRLAASNIPVTIVGETGTGKELFSRLIHQCSKRAN
KPFIALNCGALPPTLIESTLFGTVRGAYTGAENSQGYLELANGGTLFLDE
LNAMPIEMQSKLLRFLQDKTFWRLGGQQQLHSDVRIVAAMNEAPVKLIQQ
ERLRADLFYRLSVGMLTLPPLRARPEDIPLLANYFIDKYRNDVPQDIHGL
SETARADLLNHAWPGNVRMLENAIVRSMIMQEKDGLLKHIIFEQDELNLG
VPETAPENPLPSSPDPQYEGSLEVRVANYERHLIETALDTHQGNIAAAAR
SLNVSRTTLQYKVQKYAIRFGVVRN
>STY1514 putative regulatory protein
MSENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRA
LFSILISIERLGPIGVVELAERAGRDYTTVSRQVAKLEKLGLIIRQHNVI
DRRIREAVISRTGKAMTERIDAAREQMGNVVFKDWPQDKIDIFVRLMQKF
ADAMDSDASMPE
>STY0038 putative transcriptional regulator
MTIYLINSTHTYNDKTNELKNIKTGKIIKIAAMRIKCLEYMLNHAQQEII
YKKQLTNELWGERSQFISDANLTQILYLLRRDLKGFGLSQFFPRCLERVL
K
>STY3293 LysR-family transcriptional regulator
MSALSTTGHNDGITLHCLQSIAQLIPLSSAVFYRVNAYLKPEAYVLHNIS
NSTHQQYLEHFQPLDPLLPSRFGQQVITVATMTPGICARHRHYYHEFMLP
NHVCDMIEIFIRRGHRIIAGISLMRDIPFSSEERLRAQAVQPLLGLAIHD
SLQEDNDLASILTAKEREIVGMVCEGASNKLIARQLNISLSTVKTHLRNI
FAKTEVINRTELVSRTRMSSVQHSLNM
>STY0876 transcriptional regulator (iron dependant repressor family)
MGRRAGTPTTKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLII
EVGEARQVDMAARLGVSQPTVAKMLKRLASLGFIQMIPWRGVFLTPEGEK
LAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSQETLDAFLAFTQ
QHGTSAE
>STY1024 putative DNA-binding protein
MARPKTHSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIA
LERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQ
VYGASKMSINKGGAQ
>STY3762 putative GntR-family regulatory protein
MNTANFESIHIMIDAQAWRNLPLHLRLYHAFRQLVISGALADGAKLPSAR
ALAQRLHLSRDTVENAYSQLQRDGFMTRRQGAGSFASRQGVPHIQGQHSL
PPSPRQTPTLSARWQTIADRAVSFDARRVQTFTLGLAETRNFPQTIWQNF
ARQIQRERAHTLMLHGDPQGEQELRQQIAHYLNFERGAKVDAQQIVIVSG
ARQAFWLCGQLLAEAGQSVVMENPGYPGARQAFSAAQLNLLPIEVDGDGI
RVDKLPPAPLVYVTPSHQFPSGHLLSLARRHALIDWAQAHNAWIIEDDYD
SEFHYNGAPVACMQGLDREQRTLYVGTFSKTLYPGLRIGYLVVPASLAAH
FAAARNLLDGATPALTQLTLARFIASGHFAAHIRTMRSMYAVRQACLAQA
INQHLSDWVTPVVTPGGLQMPCWLHEGIDEQQTLNAARRAGLNIAGMRQF
WLTHPAPTGWLLGFAAFTPYEIENGVKLLRAALCAENVRQAGP
>STY3249 hypothetical protein
MNLQHHFLIAMPALQDPIFRRSVVYICEHNQDGAMGIIINKPLENLQIEG
ILEKLKITPEPRDSAIRLDKAVMLGGPLAEDRGFILHTPPSRFASSIRIS
DNTVITTSRDVLETLGTQQQPSDVLVALGYASWDKGQLEQELLDNAWLTA
PADLNILFKTPIAERWREAAKLIGIDILTMPGVAGHA
>STY4412 deoR family regulatory protein
MNPIKRRKHILDELNKFGEVTVIKLSEMLNVTSETIRRDLSLLESEGKIT
KIHGGAVKKQVVQEDAFSARIEAHREEKIAIGKLAAEMISERDTLFIDSC
TTNLILAEQLPPLAFSVITNSALIADKIKEHNLQARVYVLGGEYDYHFRA
NLGVSVCQQINAIHADICFIGAGGISPQHGVLVKSFEEAYVAKAMIAMSK
KSVILADHTKFGQDGVMCIASVKEIDNIITDKGFTSTGYTPQDFAGKLRI
AD
>STY1477 putative regulatory protein
MPGTEKTQHISLTTQVENRLKHQLSIGALKPGARLITKNIAQELGVSITP
VREALLRLVSSSALAVAPAQAFMVPEISLESLLEINTIRTALEEMAVVAA
AGKITPDREQTLNALLDEFQQALESGVMEKILLANRAFRFEIYHYADMPT
LYAMIEQLWVRLGPSLHFLYDNFKLDDYQNGVNLYRKLLNALVTGDKEAS
RHCLQNVLQQNVATIKNQYFM
>STY3988 putative DeoR-family transcriptional regulator
METKQKERIRRLMELLKKTDRIHLKDAARMLEVSVMTIRRDLSQDDDPLP
LTLLGGYIVMVNKPASSTNMPLPAKKTHHRDDLPVAILAAGLVRENDLVF
FDNGPEMPLVISMIPDDITFTGICYSHRVFIALNEKPNATAILCGGTYRA
KSDAFYDANNPSALDSLNPRKVFISASGVHEHFGVSWFNPDDLAAKRKAM
ERGLRKILLARHALFDEVAPASIGPLSAFDVLISDRPLPTDYAVHCRNGS
VKVITPDSESE
>STY3521 transcriptional regulator NanR
MDVMNAFDSQAEDSPTSLGRSLRRRPLARKKLSEMVEEELEQMIRRHEFG
EGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSA
DTIISELSGMAKDFLTHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIAL
LTKALEINSQSLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLI
AARPSVPDRELHEHNNVSYQQHIVIVDAIRQRDPDKADRALQTHLNSVSA
TWHALGKKSQKMR
>STY1157 putative transcriptional regulator
MSQRTEKKIGKRSQATGAKRQLILTAALAVFSQYGIHGARLEQVAERAGV
SKTNLLYYYPSKEALYVAVMRQILDVWLAPLKAFRAEFSPLEAIKEYIRL
KLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVH
SGKLAPVSPHHLIFMIWAATQHYADFAPQVEAVTGATLRDEAFFNQTVES
VQRIIIEGIRVR
>STY2917 putative transcriptional regulator
MTELEKLQASAEQAAALLKAMSHPKRLLILCMLCGSPKTSAGELARITGL
SPSATSQHLARMREEGLIDSQRDAQRIHYFIKNEAVNTLIATLKNLYCP
>STY2065 putative cro repressor
MNKISTYRKQLGLSQRQLAVQLGWIQSRLANYEANFRTPGLEECRKIVST
LNRLGAHCGLDDVFPPDGKHSENSIGAVDS
>STY2575 putative transcriptional regulator
MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAA
VHELGYMPNLAASALASASSHTIAMVVPNLAEAGCSEMFAGLQQILQPAG
YQIMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASI
PVMEMGAIRSDPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQW
IFQQHLHGWYKAMLRHHMSPNRVINAALPPNFSTGASQLPEFLLAWPELH
ALVCVSDELACGALYECQRRRIKVPYDLTVVGFGDSDVSRVCQPPLTTMA
VPHRKIGSEAGRALLERLNQGNWSDRKSIASSLCMRESC
>STY1386 putative transcriptional regulator
MDKLEAMQVYVCVVDTHSFIRAAEVLGVPRSTVSRVVKELESWLKIQLLQ
RTTRKLSVTAEGRRYYEECKRVLADIAAMESSFPGRAAQPKGRFKVGMPQ
SLARHCIIPTLPAFLCQYPELELILCSSDSVEDIILQGYDCVIRAGRIDD
STTLVARPLASFNWVIAASPTYIERYGSPENLDDLQKHHAVGYLNHRTGR
TTDWFFTREGEDYAMRVQETLVVDDTDAYIQAGIQGLGLIRVASYLVAPY
LHSGALVTCMDNHFYDLPLALVYPQNRFLSPAVRAFYDWCKTALSQPEPL
R
>STY0703 putative sigma-54 dependent transcriptional regulator
MNKTKDIAASPLCFVSPYPQLAKAAEALVAQLDYAVTIHQTTLNRILDEL
PLLESRGHQVLISRGGCAEILKKHSKLPVVEIKMSGYDILDALIPFKGQK
GTVGIVGFSSVIKGCARVAEQLNINYKIFTLQGNDKETISCLKRQLASTP
LDCIVGDTVCQDYFSPLGSQFRLLDSSPASITEALEEARSLYLAFRSQLL
ERHHLQLILDQFDKAVITLDDTGALLHYNKYASQLFKINASGEIYDASFL
KQVLHQERHTLREGKTVSAKVVDTPQGAMVVNLYPVFAARQLSRVVLTMQ
TVSSLQGAEHHVRRQELSRRGLSARYHFDDLLTENPEMLRRLAIIKNYAG
TDATILINGESGTGKEVLAQSIHNASQRVNGLFVAINCGAMATQILESEL
FGYVAGAFTGASPKGKIGLFELAHHGTIFLDEISELDKPLQTRLLRVLQE
RQIMRLGSDQMIPVDIRVIAATNQTLTKLIADGTFREDLYYRLNVLKVTT
IPLRKRPEDIKAIGLSLLTSFSQHYKRPALTLTPALWQELQRFAWPGNVR
QLSNIIERLVLSIDHSPATLDEGRLLLDDLEEGSRREPSTCHDCQMLAGD
YKTIRLRILRKLLEAERDNKSLVAKRLNVDRTSLTRWIRESA
>STY0381 possible transcriptionl regulator
MFPLNGEYNSCQISASEDIIIIIDGRVLIQGVWKGFKALMQHYPHARRIW
LTRRDIGKLYPHGCDRDPDIDPDLAKPVFIEHFIKYACANDVAVGEIAPL
TKKEEELLWHFLYKKSMSQIASSYGISRKTLYIHRLRICRKYGFKRFFHL
LFIYQRSRHIFASKICRVDKNADQA
>STY0562 hypothetical lysR-family transcriptional regulator
MFDPETLRTFISVAETGSFSKAAERLCKTTATTSYRIKLLEENTGVGLFF
RTTRSVSLTAAGSHLLSQAKDWLAWLDSMPDELRQVNDGVERQVNIVVNN
LLYSPQAVASLLSWLNARYPFTQFHFSRQIYMGVWDSLLYEGFSLAIGVT
GTEPLANTFMLDPLGSVQWRFVMSADHPLAHVSGPLTEAQLRRFPAINIE
DSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFVPQPLCQTLI
DKNELVSCTIPTMRPPSPLSLAWHKFGGGKAVEDIVKLFTQRQPEIAGFL
SIFNTVRC
>STY4812 putative acetyltransferase
MSHIMNNVASPTLTVHRITTADNAAIARVIRQVSAEYGLTADKGYTVADP
NLDELYQVYSQPGAAYWVVEQNGCVVGGGGVAPLSCSEPDICELQKMYFL
PVIRGQGLAKKLALMALDHAREQGFKRCYLETTAFLREAIALYERLGFEH
ISEPLGCTGHVDCEVRMLKDL
>STY2061 hypothetical protein
MSSSQELRSDFYREEILMETVFDALKAMGKATSVELAARLDISREEVLNE
LWELKKAGFVDKSVYTWCVADNNVQQEQPEQAELPEETTTATVAKISECD
LTAAIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFR
YCIPGDNLPAEPKAASVAETDGKAFPQPAGVALPVQEAATQEDIKTETVA
DIVQSLPSFTETRADDLVLPSLHMANRELRRAKNHVQKWERVCAALRELN
KHRDIVRQITDSSRHVASEK
>STY3352 possible AraC-family transcriptional regulator
MNDLISAAYSERLRRVCDHIERHLDEPLSLEALSRMAHSSPFHFHRQFTV
WSGLPLYRYIQWLRLRRASWRLAFNPQDKVIDIALDAGFQNPESFTRAFK
TAFGQSPCRFRQSPDWLAWHQRVPKLALQEQHVMDVKIVEFPPTRVAMLT
HLGHPDKVNASAAKFIAWRRETGQSPIASSQTFGIAWHDPQTTPPAQFRF
DICGSVRQPIAENDVGVVNSEIPGGRCAVVRHQGSLDSLPESVWYLFREW
LPASGETLRDFPVFFQYLNFVHEVAEHELLTDIYLPLR
>STY3802 putative GntR-family regulatory protein
MQVDKTSFTPLYKQLFFIICQQIQNGSLPLGSQLPTQKEIARSYNVSLIV
VKQAWSELINAGIISSQRGSGSVVCSVPEGVSYGHTFRGITRDLQDASVA
IENRILEIAPRRARDAQADGLSLPAQHHYLYISRIRCLNNRPFNHEKIYL
DLSFFPDLQLTPQALEHTSLYSLLNVTSDSAIEKVEAILPSADLCEKLQI
APNKPLLSVARQTFQAGKDSPFEYCRYYVLSEYFGEIHYH
>STY4822 protein kinase
MIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPLPGLESK
RFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFD
FLDPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKIT
DFGIATLTQELFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIE
ASTDIWPLGAMMFKLLTGDYPFGVYLDAAVNVKTKNRMEWPTFMTANPQY
QSLSQDLQKIVDKCLSYDSDKRPTAETLVKACETLCYLSEERHVGRVNNL
IQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTRNTVCYSTFDGHPWPRA
HPVILWKD
>STY3027 hypothetical protein
MMFTDWHEAAIGKTHNRMNFDCGDADLNQFLQRHARQNHEKGTTKTYVAL
DNSDVTRIHGFYSVSPASLIYAQVPGAISKGLGRYDVPVFRLGRLAVDKS
MQGQGLGAQLLLSAGKRCIQAALQVGGVALLIDAKNKQVCDWYKGFGAVP
LNDQPLSLLLSFKTLYAALSASGRL
>STY0159 putative lysR-family transcriptional regulator
MKAGLIMRHDVMSVLHAFCMIAENHSFTRAAAQLHISTSALSQNMRQLED
ELGVKLLNRTTRRVGLTEAGHAFLASIRPALNHIDEAMEHACQSRDIPGG
TLRLTVPRTAATLLLQPNLAGFMRDYPDIRLDIDVNDGFVDLINERFDAG
IRFGDAVQLDMNVVPLGDVLRPAIVASPAYLARFGTPLHPQELINHRCLC
HRFTRESGLYRWEFVHGAQRLEITPEAALMVNDKALRLSAARDGAELTYV
FEQDVHEDLQDGRLCSVLEEWLPAADRFYLYYPGRAHMAPKLRVFIDYFC
HKAILPSQQSYHR
>STY2821 putative transcriptional regulator
MNIKQLHSFLILCDELHYGRAASRLFITQPSLSQQIKQLESSLKTILFKR
KGRGIKLTKAGIILQRHANKIMLDLKNAENELLPYQDQQRDTISIGVSGS
YLVLPAFRNFMAHHPEISLNVKEFSTEQTIKKLTDSAVDIGIVYRTALPA
QLSSTMLFEDEIIAAIPLSHPLATRERLHLKDLNDQPIIVLNDSLLLRGI
ITTEFNNRKVVPNVICELDNHYSCLEYAEAQIGIAFITRSLTHLSTPKNV
RLVSLGIPAFFIPVMLVHSNDLSLDNATICLLKQIKNFYTVDNKSAPEKS
WPE
>STY3708 transcriptional regulator HdfR
MDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLENQLGVNLFTR
HRNNIRLTTAGEKLLPYAETLMNTWQAARKEVAHTSRHNEFSIGASASLW
ECMLNAWLGRLYQLQEPQSGLQFEARIAQRQSLVKQLHERQLDLLITTEA
PKMDEFSSQLLGHFTLALYCSSPARKKSELNYLRLEWGPDFQQHETGLIA
ADEVPVLTTSSAELARQQLSALNGCSWLPVNWANEKGGLHTVADSATLSR
PLYAIWLQNSDKYSLICDLLKTDVLDEQ
>STY1094 hypothetical protein
MRALSYDRIYESQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYL
RACEESVPYCVKHPPAWLMFMKCGRPVMLNYYRVDESLWRDQQQLVRLSK
YSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAK
MCWLRLRQSNPLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTA
G
>STY1005 putative transcriptional regulator
MKLDAWDKNILTLLQRDNRLSQREIAEQVNLSPSAVNRRIAALEEAGIIK
GNVSLVDAGKVGRPVTIVVQVVIENERFNLLEEARQRFVSCPQVQQVYYV
TGDFDFLLVLNVRDMAEYETLTRELFFSSGNIKSFKTIVVMQNAKQEMRV
LIE
>STY3487 hypothetical protein
MLGCFHYLTNKEPMENHEIQSVLMNALSLQEVHVSGDGSHFQVIAVGEMF
DGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF
>STY1163 putative transcriptional regulator
MEPQPPRLKPGKILDTLGAMQKSLTRASQRIAQYILAFPRQVTQSSIADL
SRDTQAGEATVIRFCRTLGYKGFQDFKMDLAIELATTESDDSSPLLDAEV
SESDDAHAIGLKLQNTISNVLSETLNLLDMQQVLGVVDALRHCHSVYIFG
VGSSGITALDMKHKLMRIGLRGDAVSNNHFMYMQATLLKAGDVAMGVSHS
GTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLINGNRQGMLQG
DSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNALDMTK
>STY3415 possible LysR-family transcriptional regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELD
VVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLT
LVTEALVPTPAFFPLIDRLAAKANTQLSLITEVLAGAWERLEQGRADIVI
APDMHFRSSSEINSRKLYTLMNVYVAAPDHSIHQEPEPLSEVTRVKYRGV
AVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYSMVE
QDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKAWCLREIPKLFAGK
>STY0448 putative deoR-family transcriptional regulator
MTRRADRLFQIVQILRGRRLTTAALLAQRLAVSERTIYRDIRDLSLSGVP
VEGEAGSGYRLMAGFDLPPLMLTHRESEALMVAIRLLKTWGGDSLSRELE
SAQEKVLAILPEESRRKAEQTRIYAPDLGTSPHSRSAFDLIHQAVSAQQV
LALHYRDEAGHLSSRDIQPLGLFFWGEHWLLVAWCERREDYRCFRLDRCL
QITPLNRRFRETIDRSLRDFLRKVEHEKMP
>STY0014 putative regulatory protein
MGSKGANKSFDYNLIKILDAVILSGNAAMAAKKLGITPAAVSLALKRLQS
YYPEELFSRGKGGLIPTAKAVDIHQNFSQVMKLVDDTFLCNSKKDEAFQI
TLLGSDIVESYYLSQLYNSDIFDRILINHFSVRNMSREHISELLFTAQGD
LLISAEPLLESGIENQIIDSFKSFVCICSSKHMLSTLSQLSLHHFYSSRH
ALYQPGMGASVIYHDSELFKDELYYTGRRIVGYRSDSLNGLMSMIERTSL
IALMPLKLALFYKNHRKYDIKFIQPPPELAFKSVQVYASWKKNSRNISTI
NEMVSMLQTLSSFRR
>STY4005 putative DNA-binding protein
MSAKTKFKSPAFEAIHSAASGLFSVDAIPQETMRSFDTACLSSIKDLQPL
EIKALREELNVSQSVFARYLNTSVSTVQKWESGAKRPSGMSLKLLNVVQK
HGLKVLV
>STY4164 putative lacI-family transcriptional regulator
MAVQNKKRAKLIDVARHAGVSPGTVSNALHNTRFVEPQTRRRIEEAIVAL
NYTPNIRARQLRTGKTNTIALLSSVPLAIASGASRLGFMMEVALTSAMMA
LEKQHALILVPPGVNPLDAVSFDAAILIEPAENDPQLQALAQAGIPCVTI
GRTPGTDTPVPWVELHSAATAQLLLTHLEASGASKCALFVGNTRRTSVLE
SEAAYQRWCAGRQDPVVYSLNESEGENAGYQAAQQLLQAHPDVDGVLVLI
DTFASGAVRAFQEQDIAIPEQIRVVTRYDGIRARESLPPLTAVNMHLDEV
ARQAITLLFAVLSGEKVSYSDGIMPELVVRASTCR
>STY0730 lysR-family transcriptional regulator
MELRQLRYFVRIIETGSMGSAAQDLDIGVSALSQQMSRLENELAIRLLQR
TSRGVTPTNAGLAFYSQAQLALRHADDAILAAREARLSGHVSVGMAPSTA
SILGIPFIHAMQENYADVRLHVVESLSGNLERMINTRQIDLAVVFQKDKI
LRWSARPILEEQLFLIGSHALLAALPDNPITPEQLAGIPLIMPSQGHGLR
GRLDAVCKEHALNVEIVAEIDGLALLMRAVRDGLGATLQPGAAISHLDND
ALRVIGVHNPVLSRPNFLVSLSDDELTPAGLAARVVLTKVMRQLVDAGEW
PGATLYAY
>STY0377 possible transmembrane regulator
MSQNNYLIDKRVILDCERMTLSCAGELITISESERSLLITFYEGLFKKDD
LINYVWGRKGVVVSDASYYKLINQLRGSFDKIGLKGESVVTRPRVGVLLS
VSIEPLSDEAQDMPLPAVAETELSTVEVRHDDTIIPPIPGAVNRKDWLYF
CLAALLMFFMIYKVKGENIDYFTLNGSYDGYTFYSVGHDKTHLADIIEAY
SEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKCISIKERY
>STY3516 N-acetylmannosamine kinase
MTTLAIDIGGTKLAAALIDNNLRISQRRELPTPASKTPDALREALKALVE
PLRAEARQVAIASTGIIQEGMLLALNPHNLGGLLHFPLVQTLETIAGLPT
LAVNDAQAAAWAEYHALPDDIRDMVFITVSTGVGGGVVCDGKLLTGKGGL
AGHLGHTLADPHGPVCGCGRVGCVEAIASGRGMAAAARDDLAGCDAKTLF
IRAGEGHQQARHLVSQSAQVIARMIADVKAITDCQCVVIGGSVGLAEGYL
EQVRAFLMQEPEPYHVALSAARYRHDAGLLGAALLAQGDTL
>STY1445 aac, aminoglycoside 6'-N-acetyltransferase
MDIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQAEHLASFIAMA
DGVAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFRQRGLAKQLIAAV
QRWGTNKGCREMASDTSPENTISQKVHLALGFEETERVIFYRKRCRGKSH
RKRSGIIPDLYITVLLWQIFFS
>STY0950 acT, hypothetical transcriptional activator
MIKTDLNDFAWFVHVVEEGGFAAAGRALDEPKSKLSRRIAQLEERLGVRL
IQRTTRQFNVTEVGQTFYEHCKAMLVEAQAAQDAIAALQVEPRGIVKLTC
PVTLLHVHIGPMLAKFMARYPDVSLQLEATNRRVDVVGEGVDVAIRVRPR
PFEDSDLVMRVLADRGHRLFASPDLIARMGIPSAPAELSHWPGLSLASGK
HIHRWELYGPQGARAEVHFTPRMITTDMLALREAAMAGVGLVQLPVLMVK
EQLAAGELVAVLEEWEPRREVIHAVFPSRRGLLPSVRALVDFLTEEYARM
VEE
>STY0521 acrR, potential acrAB operon repressor
MARKTKQQALETRQHILDVALRLFSQQGVSATSLAEIANAAGVTRGAIYW
HFKNKSDLFSEIWELSESNIGELEIEYQAKFPDDPLSVLREILVHILEAT
VTEERRRLLMEIIFHKCEFVGEMVVVQQAQRSLCLESYDRIEQTLKHCIN
AKMLPENLLTRRAAILMRSFISGLMENWLFAPQSFDLKKEARAYVTILLE
MYQLCPTLRASTVNGSP
>STY4494 adiY, putative AraC family regulatory protein
MRICSNEPCIVLLTEKDTWLRVNGKEPISLKANHMAILACENNVIDISSL
NSVLVIQVSRNNIKDYLQFLNKDLSHLPVWQRNADPLLTATCLTPDIFRV
AARYSAMETPDEIVSERTRALLFTVLSRFLDHKKFISLLMHMLRSRISDS
VYHIIQSDIHKDWNLSAVASCLCLSPSLLKKKLKNENTSYSQIITTCRMR
YAVNQLLMDGKNISQVSQLCGYNSTSYFISVFKEFYGMTPLHYVSQHRER
SAA
>STY0564 allR, negative regulator of allantoin and glyoxylate utilization operons
MTEVRRRGRPGQAEPTAQKGAQALERGIAILQYLERSGGSSSVSDISGSL
DLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGSAYIHNRDVLS
VAGPFMHRLMLLSGETVNVAIRNGNEAVLIGQKECKSMVRMCAPLGSRLP
LHASGAGKALLYPLTEEELVGIVVNTGLRRFTPTTLVDLPILLKNLERAR
EQGYTVDQEEHVVGLNCIASAIYDDAGSVVAAISISGPASRLTEDRFISQ
GELVRDTAKDISTALGLKPPVA
>STY0121 araC, arabinose operon regulatory protein
MAETQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLT
IRGEGVINNNGEQFVCRPGDILLFPPGEIHHYGRHPDASGWYHQWVYFRP
RAYWQEWLTWPTIFAQTGFFRPDEARQPHFSELFGQIISAGQGEGRYSEL
LAINLLEQLLLRRMAVINESLHPPMDSRVRDACQYISDHLADSHFDIASV
AQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVG
RNVGFDDQLYFSRVFKKCTGASPSEFRARCE
>STY4947 arcA, global response regulator
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINL
VIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDY
ITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRS
LIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRT
VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLQD
>STY3540 argR, arginine repressor
MRSSAKQEELVRAFKALLKEEKFSSQGEIVLALQDQGFENINQSKVSRML
TKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHT
SPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPASGFSVRDLYEAILE
LFEQEL
>STY3902 asnC, regulatory protein
MENYQIDNLDRGILDALMENARTAYAELAKQFGVSPGTIHVRVEKMKQAG
IITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALARLESLDEVTEAYY
TTGHYSIFIKVMCKSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTI
KP
>STY2344 baeR, putative two-component system response regulator
MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLINHGDKVLPYV
RQTPPDLILLDLMLPGIDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGL
EIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLMIDESRF
QASWCGKALDLTPAEFRLLKTLSLEPGKVFSREQLLNHLYDDYRVVTDRT
IDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRLV
>STY4644 cI, phage repressor protein cI
MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDS
FPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSK
IVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDT
SVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAI
GRAVKVIKSL
>STY3660 cI, repressor protein
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEW
VIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYI
FDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDI
TRLPGGRIFVEGGNRAFECKIEDIEIIGKIISLTVKYVK
>STY4673 cII, transcriptional regulatory protein
MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERL
IAEALGIAPEQIWPSHYRKPENY
>STY2804 cadC, transcriptional activator cadC
MQQPVVRIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHPDEVLSR
DNIIDHVWMRTIVTNHVVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKL
TAPVIWCEENSDEIDNLSTSPPPPIAATNAEPTEGVPAAAPVPPASLQTP
TKKAKKPRIAAFWTWVMFLLSLATLVVFIVMSVVDHNAAVTKTRLLLNPR
DIDVRFEGGNSCNNWVSQESYAIGLGGLITDLLNTYSTFMVHDKTNYRVN
EPSNSGKTLTIQFVNQRHYRAQQCFMSVVLIDNADGSTMLDKRYFVTNTN
QLSIQDDLFNSLSFVLTQPWPNRMREQLALFRTPQNTALMRFYEARQLIL
SGDAQALSKAGDILNGIIKETPDFNYAYEYKVLVDVLRQSQQPFDKEQVA
ALNEEFKKIDQIPGVEKTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEM
SWFNYVLLGKVYEMKGENRLAADAYLTAFNLRPGENTLYWIENGVFQTSV
QKIVPYLNSFLAED
>STY1798 celD, putative cel operon repressor
MMQLQVNATEIKTVYEQQLFNGKNFHVFIYNKTESVTGLHQHDYYEFTLV
LTGRYYQEINGKRVLLERGDFVFIPVGSNHQSFYEFGATRILNVGISKRF
FEQHYLPLLPFCFVASQVYRANSTFLTYIETVIASLNFRGNGLDEFIEVV
TFYIINRLRHYREEQVYDDIPQWLKATVEIMHDKTQFGEHALENMVRLSA
KSQEYLTRATRRYYSKTPMQIINEIRINFAKKQLEMTNYSVTDIAYEAGY
SSPSLFIKTFKKMTSFTPNSYRKRLTEINE
>STY0061 citB, transcriptional regulatory protein citb
MDSITTLIVEDEPMLAEILVDTIKLFPQFSIVGIADKLESAKKQIRLYQP
QLILLDNFLPDGKGIDLIRHTISTNYTGRIIFITADNHMDTISDALRMGV
FDYLIKPVHYQRLQHTLERFTRYRSSLRSSEQANQTHVDALFNIQAKEQT
AEPNSGLRGIDENTFNRVRQIFADPQAVHTADTLAQILGSSKTTARRYLE
QGVKNNFLEAEISYGKVGRPERLYRGKV
>STY1261 cobB, NAD-dependent deacetylase
MMENPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFARNPG
LVQTFYNARRQQLQQPEIQPNAAHLALAKLEEALGDRFLLVTQNIDNLHE
RAGNRNIIHMHGELLKVRCSQSGQILEWNGDVMPEDKCHCCQFPAPLRPH
VVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHT
VELNLEPSQVGSEFEEKHYGPASQVVPEFVDKFLKGL
>STY1128 copR, response regulator
MTIMSSCWRFTDSLTSLWHTALMKILLIEDNQKTIEWVRQGLTEAGYVVD
YACDGRDGLHLALQEHYSLIILDIMLPGLDGWQVLRALRTAYQPPVICLT
ARDSVEDRVKGLEAGANDYLVKPFSFAELLARVRAQLRQHVPVFTRLTIN
GLDMDATKQSVLRNGKPISLTRKEFLLLWLLASRAGEIVPRTAIASEVWG
INFDSETNTVDVAIRRLRAKVDDPFEKKLIMTVQGMGYRLQAETSQNG
>STY3812 cpxR, two-component response regulatory protein
MNKILLVDDDRELTSLLKELLEMEGFNVLVAHDGEQALELLDDSIDLLLL
DVMMPKKNGIDTLKALRQTHQTPVIMLTARGNELDRVLGLELGADDYLPK
PFNDRELVARIRAILRRSHWSEQQQSSDNGSPTLEVDALSLNPGRQEASF
DGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMH
ISNLRRKLPERKDGHPWFKTLRGRGYLMVSAS
>STY4935 creB, putative two-component response regulator
MQQPQVWLVEDEQGIADTLIYTLQLEGFTVELFARGLPALEKARQQRPDA
VILDVGLPDISGFELCRQLLERHPALPILFLTARSDEVDRLLGLEIGADD
YVAKPFSPREVSARVRTLLRRVKKFAAPSPVVRTGHFDLNEPAAQIAWFG
TPLSLTRYEFLLLKTLLLSPERVYSCQQLMDIVWSDAQETFDRTVDTHIK
TLRAKLRAINPDLSPINTHRGMGYSLRSI
>STY1179 csgD, putative regulatory protein
MFNEVHSSHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLEDI
SAGCIVLMDMMEADKKLIHYWQDNLSRKNNNIKTLLLNTPDDYPYREIEN
WPHINGVFYATEDQEHVVSGLQGILRGECYFSQKLASYLITHSGNYRYNS
TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAV
KNRTQAVS
>STY2800 csiE, stationary phase inducible protein CsiE
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTARED
ITDTSLEIQRYHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPT
FVTQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFEHRDVQ
FLRLFLQYCLLQHHAGITPEFNPVQQIWAQSCAEYPLAQEIGRHWQRHVM
QAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVARLVLRFREKGN
VRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTR
EALAGFEAEYGIHFSEEETGLVAVIFGAWLMQDNDLHERQIVLLADKNDA
LETHIEQQLRELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLF
SPPLIHADRALTEHQQQQIRKILES
>STY4153 cspA, cold shock protein
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQK
VSFTIESGAKGPAAGNVTSL
>STY2204 cspB, cold shock protein
MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQE
VEFSAEQGPKGPSAVNVVAL
>STY1967 cspC, cold shock-like protein CspC
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNV
EFEIQDGQKGPAAVNVTAI
>STY0940 cspD, cold shock-like protein CspD
METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRF
DVHQGPKGNHASVIVPIEAEAVA
>STY0678 cspE, cold shock protein E
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRV
EFEITNGAKGPSAANVTAL
>STY1881 cspH, putative cold shock protein
MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIR
VEFCRINGLRGPTAANVYLS
>STY0545 cueR, copper efflux regulator
MNISDVAKKTGLTSKAIRFYEEKGLVTPPLRSENGYRTYTQKHLNELTLL
RQARQVGFNLEECGELVNLFNDPRRHSADVKKRTLEKVAEIERHISELQS
MRDQLLAMAESCPGDDSADCPIIDNLSGCCHHKAQKLR
>STY1337 cysB, transcriptional regulator for cysteine regulon
MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFA
RSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATT
HTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATE
ALHLYDDLVMLPCYHWNRSIVVTPDHPLAATSSITIEALAQYPLVTYTFG
FTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDP
LTDPDLVRIDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV
DTAVALRSNEEIEAMFQDIKLPEK
>STY3776 cytR, transcriptional repressor
MKSNKQVTAATMKDVALKAKVSTATVSRALMNPDKVSQSTRSRVEQAALE
VGYFPQSMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAAEQGYLV
LIGDCAHQNQKEKTFLNLIITKQIDGMVLLSSRLPFDASVEEQRNLPPMV
MSNEFAPELELPTVHIDNLTAAFNAMNYLLDLGHKRIGCIAGPEDMPLCH
YRLQGYVQALRRSGIVVDPHYIARGDFTFEAGANALKQLLEQPLPPTAVF
CHSDVMALGALSWAKRQGLKVPDDLSIIGFDNIALAEFCDPPLTTVAQPR
FDIGREAMLLLLDQMQGQNVSSGSRLMDCELIIRGSTRALP
>STY4501 dcuR, two-component response regulator
MINVLIVDDDAMVAELNRRYVAQISGFHCCGTASTLEKAKEFIFNSENHI
DLILLDIYMQQENGLDLLPVLHSAGCKSDVIVISSAADAATIKDSLHYGV
VDYLIKPFQATRFEEALTGWLRKKTAMEKRQYYEQSELDLLIHGNSSSEQ
EPRRLPKRLTQQTLRTLCQWIDAHQEQEFSTDELANEVNISRVSCRKYLI
WLVNCHILFTSIHYGVTGRPVYRYRVQPEHYSLLKQYCQ
>STY0897 deoR, deoxyribose operon repressor
METRRDERIGQLLQALKRSDKLHLKEAATLLGVSEMTIRRDLNHKSAPVV
LLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAQLAAGLVQAHQTVFIDC
GTTTPWIIEAIDNDLPFTAVCYSLNTFLALQDKPHCRAILSGGEFHASNA
IFKPLDFHETLNNICPDIAFYSAAGVHTSKGATCFNLEELPVKHWAMTMA
QSHVLVVDHSKFGKVRPARMGELSRFDTIISDRRPDEAFVAYAKAQQITL
MY
>STY0675 dpiA, transcriptional regulator CriR
MTEPLTLLIVEDETLLAEMHAEYIRHIPGFNQIWLAGNLAQARMMIDRFK
PGLILLDNYLPDGKGITLLHELMQSRYPGGVVFTTAASDMETVAEAVRSG
AFDYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGE
PKGDLPTGIDALTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEY
CASRHLIVAEIIHGKVGRPQRIYHGG
>STY3979 dsdC, D-serine deaminase activator
MEPLRDTRNRLLNGWQLSKLYTFEVAARHQSFALAADELSLSPSAVSHRI
NQLEAELGIQLFVRSHRKVELTHEGKRVFWALKSSLDTLNQEILDIKNQE
LSGTLTVYSRPSIAQCWLVPALGDFTRRYPSISLTMLTGNDNVNLQRAGI
DLAIYFDDAPSAQLTHHFLMDEAILPVCSPDYARRFALQDNLNNLRHCTL
LHDRQAWSNDSGTDEWHSWAQHFAVNLPDSSGIGFDRSDLAVIAAMNHIG
VAMGRKRLVQKRLDSSELIAPFGDMRLKCHQHYYVTTLPGRQWPKIEAFI
RWLQEQV
>STY4697 ecnR, transcriptional regulatory protein
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWK
PHLVIADLYGFLNDALPEQPINAFFAACRMTPLVLLQSGNMPYRSQYASH
AVLSKHTPLHELAQRIKGALYTHPLQEAPESATPLLSPQEEKVLAMWTEG
TSNKEIAYALGIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPEKID
>STY2939 emrR, putative transcriptional regulator
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQGKLLENRNKMLKA
QGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGW
IERRESDNDRRCLHLQLTEKGQAFLQEVLPPQHHCLHQLWSSLSTAEKDQ
LEHITRKLLTRLDQMEQEGTVLEALR
>STY1934 fadR, fatty acid metabolism regulator
MVIKAQSPAGFAEEYIIESIWNNCFPPGTILPAERELSELIGVTRTTLRE
VLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDN
LLSVRTNISTIFIRTALRQHPDKAQEVLATAHEVADHADAFADLDYNIFR
GLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSSLC
EQGAHDQVYETVRRYGHDSGEIWHRMQKNLPGDLAIQGR
>STY0600 fimW, fimbriae w protein
MLSIAIKEQNSHFEHGLKIIMTRLANQWQQKIDFLPPEEIDNADIAFLTL
DDDWFSAGCYQIPMHTQHQLRVIICNKCDKEKLMFRPCLYMLPHIYREDD
VEEITRKMILILHKRALRHSVPSGICHYCTTRHFSVTERHLLKLIASGYH
LSETAALLSLSEEQTKSLRRSIMRKLHVKTEQQFLKYIRVNLHFLLSK
>STY0596 fimZ, probable transcriptional regulator (FimXZ protein)
MKPASVIIMDEHPIVRMSIEVLLGKNSNIQVVLKTDDSRTAIEYLRTYPV
DLVILDIELPGTDGFTLLKRIKSIQEHTRILFLSSKSEAFYAGRAIRAGA
NGFVSKRKDLNDIYNAVKIILSGYSFFPSETLNFISNTRPPKGGHHDMPL
SNREVTVLRYLANGMSNKEIAEQLLLSNKTISAHKANIFSKLGLHSIVEL
IDYAKSHELL
>STY3565 fis, DNA-binding protein Fis
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDL
YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
>STY1211 flgM, negative regulator of flagellin synthesis (anti-sigma factor)
MSIDRTSPLKPVSTVQTRETSDTPVQKTRQEKTSAATSASVTLSDAQAKL
MQPGVSDINMERVEALKTAIRNGELKMDTGKIADSLIREAQSYLQNK
>STY2164 fliA, flagellar biosynthesis sigma factor FliA
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGI
GLLNAVDRYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREV
AQAMGQLEQELGRNATETEVAERLGIPVAEYRQMLLDTNNSQLFSYDEWR
EEHGDSIELVTEEHQQENPLHQLLEGDLRQRVMDAIESLPEREQLVLTLY
YQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
>STY0138 fruR, fructose repressor
MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPN
AVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSE
DQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA
LDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQG
FRTAWKDDPREVNFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALL
QGVMDVTLRRDGKLPSDLAIATFGDHELLDFLQCPVLAVAQRHRDVAERV
LEIVLASLDEPRKPKPGLTRIRRNLYRRGILSRS
>STY3119 fucR, l-fucose operon activator
MKAARQQAIVDLLINHKSLTTEALATRLNVSKETIRRDLSELQTQGKVLR
NHGRAKYIHRENQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMTIALD
ASSTCWYLARQLPDIPIQVFTNSHPICQELGKRERIALISSGGQLERKYG
CYVNPSLISQLKSLDIDLFIFSCEGIDGGGDLWDSNAINADFKSILLRRA
SQSLLLIDKSKFNRSGEARIGHLDDVTHIVSDAPQS
>STY3155 galR, galactose operon repressor
MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNAN
ARALAQQATETLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHN
EQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQIPGMVLINRILPG
LEHRCVALDDRYGAWLATRHLIQQGHTRIGYICSNHTISDAEDRLRGYYD
ALAESHIPANDRLVTFGEPDESGGEQAMTELLGRGRHFTAVACYNDSMAA
GAMGVLNDNGVGVPGEVSLIGFDDVLVSRYVRPRLTTIRYPIVTMATQAA
ELALALAGKCPTPEVTHVFSPTLVRRHSVSTPTDTGHLSTTD
>STY2425 galS, mgl repressor and galactose ultrainduction factor
MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLGYRPNAN
AQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHE
AEKERHAIEVLIRQRCNALIVHSKALTDRELSDFMDQIPGMVLINRIVPG
YAHRCVCLDNVSGARMATRMLLNNGHQRIGYLAFSHRIEDDAMRREGWLH
ALQEQGVAASESWIGTGTPDMQGGESAMVELLGRNLQLTAVFAYNDNMAS
GALTALKDNGIAIPLHLSVIGFDDIPIARYTDPQLTTVRYPIASMAKIAT
ELALQGAAGTLDITATHCFMPTLVRRHSVAWRQNAVLITN
>STY3445 gatR, galactitol utilization operon repressor
MNSFERRNKIVDLINTQGSVLVMDLSNTFGISEVTIRADLRLLEEKGLVT
RFHGGAAKPGSHLAEGDNQEVILEDRYQLASDPKKRIAQAAAAMVEEGMT
IILDSGSTTLLIAEALARKSNITVITNSLPAAFTLSENKDLTLVVCGGTV
RHKTHSMHGTIAERSLHGISADVMFVGADGIDATNGITTFNEGYSISGVM
AAAAHKVIAVLDATKFNRRGFNQVLPMDKIDCVITDDTISKQDKAALAKT
GVELMIV
>STY3122 gcvA, regulatory protein for glycine cleavage pathway
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGL
KLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSL
PPSFAIQWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRG
NWPGLRVEKLYAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDW
QAYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGIALANNVMAQSEIEA
GRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAATEQEKFR
FRYEQ
>STY4280 glpR, glycerol-3-phosphate regulon repressor
MKQTQRHDAIIELVKKQGYVSTEELVEHFSVSPQTIRRDLNDLAEQNMIL
RHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAAQIPNGSTLFIDIG
TTPEAVAHTLLGHSNLRIVTNNLNVANTLMAKEDFRIILAGGELRSRDGG
IIGEATQDFIAQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSR
HVMLVVDHSKFGRNAMVNMGSISMVDAVYTDTLPPPGVMQVIADHHIQLE
LC
>STY4268 gntR, gluconate utilization operon repressor
MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYI
PNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIEAVTDAHGYQTMLAH
YGYKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMD
SQSPCLDIAVGFDNFEAARQMTAAIIARGHRHIAYLGARLDERTIIKQKG
YEQAMRDAGLVPYSVMMEQSSSYSSGIELMRQARREYPQLDGIFCTNDDL
AVGAAFECQRLGLKIPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI
GAERLLARIRGETVTPKMLDLGFTLSPGGSI
>STY3477 greA, transcription elongation factor GreA
MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHA
AREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDTD
EEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEQDDVVVIKTPGGDVEY
EVLKVEYL
>STY4293 greB, transcription elongation factor GreB
MKTPLITREGYETLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQY
NKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAWVEIENDDGDT
LKFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPVGEANWYV
NAIEYVK
>STY0111 hepA, ATP-dependent helicase HepA
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPV
TRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREV
LLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQ
RTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA
ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQ
LVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYR
PVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAAR
DELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKV
SGIMGARKSAEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTS
HRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF
AEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASL
INYLAAPEETDGFDDLIKSCREQHEALKAQLEQGRDRLLEINSNGGEKAQ
QLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPD
FPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSST
ISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN
NLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEQSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESL
NQAGWRLDALRLIVVTHQ
>STY2095 hexR, putative hex-regulon repressor
MNMLEKVQSQLEHLSKSERKVADVILAAPGRSIHLSIAMLAQEANVSEPT
VNRFCRSMNTRGFPDFKLHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFE
SAMASLDHVRQSLDKSAVNRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKF
FRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLISHTGRTKSLVELAQLARE
NDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSRLAQLTVIDVL
ATGFTLRRGAKFRDNLKRVKEALKESRFDKELLIRSDDR
>STY1142 hpaA, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
MCQRAIANIDISKEYDESMGSNDVHYQSFARMADFFGRDMQAHRHDQFFQ
MHFLDTGQIELQLDDHRYSVQAPLFVLTPPSVPHAFITESDSDGHVLTVR
EELVWPLLEVLYPGTREAFGLPGICLSLADKLNELAALKHYWQLIEREST
EQLAGCEHTLVLLAQAVFTLLLRNAKLDDHAATGMRGELKLFQRFTLLID
NHFHQHWTVPDYACELHITESRLTDICRRFANRPPKRLIFDRQLREAKRL
LLFSDNAVNEIAWQLGFKDPAYFARFFNRLAGCSPSQFRQREVPSFLN
>STY1132 hpcR, homoprotocatechuate degradative operon repressor
MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSPSMDFHE
LAFRTCILRPSLTGILTRMERDGLVLRLKPVNDQRKLYVMLTEQGQTLYA
RARSEVEEAYRKIEADFTPEKTQQLMLLLDDLIALGRQHPDSEAEA
>STY0822 hutC, histidine utilization repressor
MYSSRSRSAPAPFYETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSR
MTINRALRELTDEGWLVRLQGVGTFVAEPKGQSALFEVRSIAEEIAARHH
QHRCEVLTLERVRANAIQASALNVNESDVIFHSIMVHYENDLPVQIEDRC
VNADIAVDYLTQDYRQTTPHAYLSRIAPLTEGEHIVEAVRATAQECAWLT
IKEHEPCLLIRRTTWSASRIVSHARLLFPGSRYRLQGRFIS
>STY2977 hypB, hydrogenase isoenzyme formation protein HypB
MCTTCGCAEGNLYIEGDEHNPHSAFRSAPFAPAARPALNITGIKTPDFTP
SQTAEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFA
ARQQLVLNLVSSPGSGKTTLLTETLMKLKDRVPCAVIEGDQQTVNDAARI
RATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDHGILFIENVGNLVCPA
SFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDV
EKCIASAREVNPEIEIILISATSGEGMDQWLAWLEAQRCA
>STY2999 iagA, invasion protein regulator
MPHFNPVPVSNKKFVFDDFILNMDGSLLRSEKKVNIPPKEYAVLVILLEA
AGKIVSKNTLLDQVWGDAEVNEESLTRCIYALRRILSEDKEHRYIETLYG
QGYRFNRPVVVVSPPAPQPTTHTLAILPFQMQDQVQSESLHYSIVKGLSQ
YAPFGLSVLPVTITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNIVQ
IEIVRVKGYHLLHQESIKLIEHQPASLLQNKIANLLLRCIPGLRWDTKQI
SELNSIDSTMVYLRGKHELNQYTPYSLQQALKLLTQCVNMSPNSIAPYCA
LAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTI
HSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINECLK
LDPTRAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQVMF
LSLKGKHELARKLTKEISTQEITGLIAVNLLYAEYCQNSERALPTIREFL
ESEQRIDNNPGLLPLVLVAHGEAIAEKMWNKFKNEDNIWFKRWKQDPRLI
KLR
>STY3220 iciA, chromosome replication initiation inhibitor protein
MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPL
LVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNAD
SLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQA
LPSCLVDKLGALDYLFVASKPFAERYFPNGVTRSSLLKAPAVAFDHLDDM
HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTACCMIPHLQIEKELE
SGELINLTPGLLQRRMLYWHRFAPESRMMRKVTDALLEYGHKVLRQD
>STY4404 iclR, acetate operon repressor
MVAPVPAKRGRKPAATTAPVTGQVQSLTRGLKLLEWIAESNGSVALTELA
QQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAVGAHAFIVGSSFLQSRN
LLAIVHPILRKLMEDSGETVNLAVLDQSDHQAIIIDQVQCTQLMRMSAPI
GGKLPMHASGAGKAFLSQLSEEQVTSLLHRKGLHAYTHATLVSPLHLKDD
LAQTRKRGYSFDDEEHALGLRCVASCIYDEHREPFAALSISGPCSRITDD
RVTELGAMVIKAAKEVTLAYGGFR
>STY3649 ilvY, LysR-family regulatory protein for ilvC expression
MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVR
DNRTVTLTEAGEELRVFAQQTLLQYQQLRHTLDQQGPSLSGELHIFCSVT
AAYSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPE
TLPGAVAFSMLENLAVVLIAPALPCPVRNQVSVDKPDWSTVPFIMADQGP
VRRRIELWFRRHKISNPQIYATVGGHEAMVSMVALGCGVALLPEVVLENS
PEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIDAFWKILPN
>STY3022 invF, possible AraC-family regulatory protein
MSFSESRHNENCLIQEGALLFCEQAVVAPVSGDLVFRPLKIEVLSKLLAF
IDGAGLVDTTYAESDKWVLLSPEFRAIWQDRKRCEYWFLQQIITPSPAFN
KVLALLRKSESYWLVGYLLAQSTSGNTMRMLGEDYGVSYTHFRRLCSRAL
GGKAKSELRNWRMAQSLLNSVEGHENITQLAVNHGYSSPSHFSSEIKELI
GVSPRKLSNIIQLADK
>STY3251 kdgR, probable global regulatory protein
MSSQPNQSLIDGIRCLQYLVSSDRAIGCRELARLMDINTTRVNRLLMTMA
SIGLTMQDEHRRYLPGPGIHALAAQAIRGSALFSHALPILERHAPRDIVV
ALGVLWEDQIIYIYHSTPGAQGSQALAGFRMCLAWQSVPGVALLAAESDE
ALMQRFSPEQWRNLAPHVAQQRQRGYVLWHHADGEVSMAQPLDKHAAALA
FAGMWRIDEAEAAARLQALKALNQLIAQ
>STY1972 kdgR, transcriptional regulator KdgR
MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYR
FLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREL
SRLTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKV
LLAWRDRDEVKQILDGVEYKQSTGRTITSTEALLPLLDEVRAQGYGEDNE
EQEEGLRCIGVPVFDRFGVVIAGLSISFPTLRFSEERLQEYVAMLHVAAR
KISEQMGYNDYPF
>STY0743 kdpE, KDP operon transcriptional regulatory protein
MTNVLIVEDEQAIRRFLRAALEGDGLRVYEAETLQRGLLEAATRKPDLII
LDLGLPDGDGIDFIRDLRQWSAIPVIVLSARSEESDKIAALDAGADDYLS
KPFGIGELQARLRVALRRHAASPCADPIVRFSGVTVDLAARLIHRGDEEI
HLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLR
QKLEQDPTRPRHFIIETGIGYRFMP
>STY4103 lctR, putative L-lactate dehydrogenase operon regulator
MIVMPKRLSDEIASRVRALIEEQNLEAGMKLPAERQLALQLGVSRNSLRE
ALAKLVSEGVLVSRRGGGTFVRWQHETWSEQNIVQPLKMLMANDPDYSFD
ILEARHAIEASTAWHAAMRATAADKEKIRLCFDATLSEDPDLASQADVRF
HLAIAEASHNVVLLQTMRGFFDVLQSSVKQSRQRMYLVPPVFSKLTEQHQ
AVLDAILDGNAEGARKAMMAHLSFVHTTIKRFDEDQARQARITRLPGDHN
EMTRENKS
>STY0134 leuO, leucine transcriptional activator
MPEVKTEKPHLLDMGKPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQ
PAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNEL
PGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVEKIAPNIHVVFKASLN
QNTEHQLRYQETEFVISYEEFRRPEFTSVPLFKDEMVLVASRKHPRISGP
LLEGDVYNEQHAVVSLDRYASFSRPWYDTPDKQSSVAYQGMALISVLNVV
SQTHLVAIAPCWLAEEFAESLELQILPLPLKLNSRTCYLSWHEAAGRDKG
HQWMEDLLVSVCKR
>STY4433 lexA, LexA repressor
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL
ARKGVLEIVSGASRGIRLLQEEEDGLPLVGRVAAGEPLLAQQHIEGHYQV
DPSLFKPSADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID
DEVTVKRLKKQGNKVELLPENSEFTPIVVDLREQSFTIEGLAVGVIRNGE
WL
>STY2560 lrhA, NADH dehydrogenase operon transcriptional regulator
MINANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLE
QLVGKELFARHGRNKLLSEHGIQLLGYARKILRFNDEACSSLMFSNLQGV
LTIGASDESADTILPFLLSRISSVYPKLALDVRVKRNAYMVDMVKSQEVD
LVVTTNQPHSLDCLNLRTSPTHWYCAAEYVLQRGEPVPLVLLDDPSPFRD
MVLETLNAAGIPWRLAYVASTLLAVRAAVKAGLGVTARPVEMMSPDLRVL
GAADGLPPLLDTEYMLCRDPNSQNELAMVIFHAMESYQNPWHYNQFSAEG
GDDPLMVEGGFE
>STY0957 lrp, leucine-responsive regulatory protein
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVR
RLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNAAVKKL
EEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVM
EEVKQSNRLVIKTR
>STY3158 lysR, transcriptional activator protein LysR
MAAVNLRHIEIFHAVMTAGNLTEAARLLHTSQPTVSRELARFEKVLGLTL
FERTRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIAC
LPVFSQSFLPPLLPPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTE
TLHAPAGTTRTELLTLNEVCVLPCDHPLAAKTVLTPDDFQGENFISLSRL
DSYRQLLDTLFAEHQVKRRMVVETHSAASVCAMVRAGAGVSIVNPLTALD
YAASGVTVRRFSIDVPFTVSLIRPLHRPASALVDAFSKHLQTHLSRLVEP
LEVILGPMTKA
>STY4281 malT, transcriptional regulator MalT
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLLLVTSPAGYGKTTLVS
QWAAGKNELGWYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKR
QYASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQP
ENFTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLS
SPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSARRLAGINASH
LSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEE
IERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQWELAAELPEIHRAAAES
WMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKAL
PWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAE
FNALRAQVAINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHC
KGNLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWET
QERAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVL
STFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLEKLLGNGRYHCDWIS
NADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQIL
LGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQSGRKNDAQRV
LLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILR
YINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSG
YSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG
V
>STY1541 marA, multiple antibiotic resistance protein MarA
MSICSRKFCRRQKRGMTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSE
RSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAER
YGFESQQTLTRTFKNYFDVPPHKYRITNMHGESRYMLPLNHGNY
>STY1540 marR, multiple antibiotic resistance protein MarR
MVNQKKDRLLNNYLSPLDITATQFKVLCSIRCAGCITPVELKKVLSVDLG
ALTRMLDRLLCKGWIERLPNPNDKRGVLVKLTPDGAAICEQCHQRPGQDL
HQELTKNLTADEVATLEYLLKKILP
>STY4496 melR, melibiose operon regulatory protein
MSTQAISLLPPDPHMCNGDEKQTRSPLSLYSEYQRLDVELRPPHRMASSH
WHGQVEVNVPFDGDVEYLINNEVVQIKQGHITLFWACTPHQLTRPGNCRQ
MAIFSLPMHLFLSWPLDRDLINHVTHGMVVKSLATQQLSTFEVLRWQQET
SSPNEQIRQLAIDEIGLMLKRFSLSGWQPILLNKTSRTHKNSVSRHAQFY
VSQMLGFIADNYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITA
MRINHVRALLSDTDKTILDVALTAGFRSSSRFYSTFSKFVGMSPQQYRKL
SQQRRQTMPG
>STY3770 metJ, transcriptional repressor protein MetJ
MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLR
HATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGIDP
ETWEY
>STY3595 metR, trans-activator of metE and metH
MIEIKHLKTLQALRNSGSLAAAAAVLHQTQSALSHQFSDLEQRLGFRLFV
RKSQPLRFTPQGEVLLQLANQVLPQISRALQACNEPQQTRLRIAIECHSC
IQWLTPALENFRASWPQVEMDFTSGVTFDPQPALQQGELDLVMTSDILPR
SGLHYSPMFDFEVRLVLAPDHPLASKTQITPEDLASETLLIYPVQRSRLD
VWRHFLQPAGISPLLKSVDNTLLLIQMVAARMGIAALPHWVVESVERQGL
VVTKTLGDGLWSRLYAAVRDGDQRQAVTEAFIRSTRDHACDHLPFVRSAE
RPIFDAPTAKPGSQPRL
>STY1256 mfd, transcription-repair coupling factor (TrcF)
MPEKQRYTLPTKAGDQRQLGELTGAACATLVAEIAERHAGPVVLIAPDMQ
NALRLHDEIRQFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPS
MQRGVLIVPVNTLMQRVCQHSYLHGHALVMKKGQRLSRDALRAQLDSAGY
RHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQ
RTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDAEHIYQQVSK
GTLPAGIEYWQPLFFSEPLPPLFSYFPANTLVVNTGSLETSAERFQADTL
ARFENRGVDPMRPLLPPEALWLRVDGLFSELKRWPRLQLKTDHLPEKAAN
TNLGFQKLPDLAIQAQQKAPLDALRKFLESFSGPVIFSVESEGRREALGE
LLARIKIAPKRILRLDEAQDAGRYLMIGAAEHGFIDTQRNLALICESDLL
GERVARRRLDSRRTINPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLE
AGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAW
SRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHK
QVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEAA
EGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVD
ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVRE
AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMREREL
ERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTADAQKRLEAIASLEDLGAGFALATHDL
EIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQ
QTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRF
GLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAEKNHVDPAWL
IGLLQKQPQHFRLDGPTRLKFIQDLSERKTRIDWVRQFMQQLEENAIA
>STY4109 mtlR, mannitol operon repressor (mannitol repressor protein)
MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITA
VELLTEAVNILVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGL
GVLSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPP
PPHFDTSDAALYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
>STY0720 nagC, N-acetylglucosamine repressor
MTPGGQAQIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVT
KITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDTTL
TLYDLSSKVVAEEHYPLPERTQETLEHALLNTIAVFIDSCQRKIRELIAI
SVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFHVTCFVGHDIRSLA
LAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQV
EPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI
CKAANRGDSLASEVIEHVGRHLGKTIAIAINLFNPQKIVIAGEIIEADKV
LLPAIESCINTQALKAFRKNLPVVRSTLDHRSAIGAFALVKRAMLNGTLL
QRLLES
>STY1285 narL, nitrate/nitrite response regulator protein NarL
MNNQEPATILLIDDHPMLRTGVKQLVSMAPDISVVGEASNGEQGIDLAES
LDPDLILLDLNMPGMNGLETLDKLREKALSGRIVVFSVSNHEEDVVTALK
RGADGYLLKDIEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATTD
RDVTQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL
KSRVEAAVWMHQERIF
>STY2472 narP, nitrate/nitrite response regulator protein NarP
MPEVTPFQVLIVDDHPLMRRGIRQLLELDPAFYVVAEAGDGASAIDLANR
IEPDLILLDLNMKGLSGLDTLNALRRDGVTAQIIILTVSDSASDIYALID
AGADGYLLKDSDPEVLLEAIRKGANGGKVFSDRVNEYLRERERFGAQEDP
FSILTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS
RVAATILFLQTRGMQ
>STY0048 nhaR, transcriptional activator protein NhaR
MSMSHINYNHLYYFWHVYKEGSVVGAAEALFLTPQTITGQIKALEERLQG
KLFKRKGRGLEPSELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVG
VADALSKRLVSSVLDAAVVVDEPIHLRCFESTHEMLLEQLSQHKLDMIIS
DCPIDSTQQEGLFSVKIGECSVSFWCTNPLPEKAFPACLEERRLLVPGRR
SMLGRKLLNWFNSQGLQVEILGEFDDAALMKAFGATHDAIFVAPSLYSLD
FYADESVIEIGRVENVMEEYHAIFAERMIQHPAVQRICNADYSALFKLQ
>STY4227 nikR, nickel responsive regulator
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRGALAQEATQEHGT
QGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAV
LKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
>STY3485 nlp, Ner-like regulatory protein
MESKLIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALTRPWPKGE
LIIAKALGTEPWVIWPSRYHDPRTHEFIDRTRLMRARNKDKQNVE
>STY3468 nusA, transcription elongation factor NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEID
RKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESV
TFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNI
SLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQL
FVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRI
DPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVAS
IVVDEDKHTMDIAVEAGNLAQAIGRNGQNVHLASQLSGWELNVMTVDDLQ
AKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEI
DGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMA
FKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>STY0457 nusB, transcription antitermination protein NusB
MKPAARHRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRE
LLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPY
KVAINEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK
>STY3737 nusG, transcription antitermination protein NusG
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVV
EIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRP
APISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEE
VDYEKSRLKVSVSIFGRATPVELDFSQVEKA
>STY4294 ompR, osmolarity response regulator
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH
LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD
DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTR
EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS
IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
>STY3749 oxyR, hydrogen peroxide-inducible regulon activator
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLER
TSRKVLFTQAGLLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPT
IGPYLLPLIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCAILALVK
ESEAFIEVPLFDEPMMLAIYEDHPWANRDRVPMSDLAGEKLLMLEDGHCL
RDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPQERK
RDGVVYLPCIKPEPRRTVGLVYRPGSPLRSRYEQLAEAIRGAMDGHFDKA
LKQAV
>STY0174 pdhR, transcriptional regulator of pyruvate dehydrogenase complex
MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPS
LREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQFDL
LETRHALEGIAAYYAALRSTDEDKDRIRELHHAIELAQESGDLDAESEAV
LQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYARREMLPLVST
HRTRIFEAIMAGKPEEAREASHRHLAFIEEIMLDRSREESRRERALRRLE
QRKN
>STY2246 pduD, diol dehydratase medium subunit
MEINEKLLRQIIEDVLRDMKGSDKPVSFNTPAASTAPQTAAPAGDGFLTE
VGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGI
RARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKDTTVIHQQGLPPLSN
LELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKS
AILHIKETKYVVTGKNPQELRVTL
>STY4486 phnO, putative acetyltransferase
MILMKRREDIMPVCELRHATTEDTDSVYALICELLKNELDYQAFRDGFAA
NLLDPNLHYRLALRNGEVVGMISLHMQFHLHHANWIGEIQELVVLPQMRG
QKVGSQLLAWAEEEARQAGAELTELSTNIKRRDAHRFYLREGYKQSHFRF
TKAL
>STY0469 phnR, probable regulator of 2-aminoethylphosphonate uptake and metabolism operon
MKSIPGDIPQYLLIKAQLQARIQSGALKSGDKLPSERELCAIFNTTRITI
RESLAQLESSGLIWRADRRGWFVTPERLWLDPTQNTNFHKLCREQGREPK
TALLSGVLTTVPVEVMEPLQLQPFDQIYLLTRLRYADGRAVCYCENHCLP
ARVPELLQYDLNGSLTEVYESHYNLVYTSMHLSFYPTAMPAQAAQALGVM
EGRPALLLRRLNYDQHGRVLDLDIEYWRHDSLRIEVDTH
>STY0432 phoB, phosphate regulon transcriptional regulatory protein PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNKLNEPWPDLI
LLDWMLPGGSGLQFIKHLKREAMTRDIPVVMLTARGEEEDRVRGLETGAD
DYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPGSHRVMTGD
SPLDMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIR
RLRKALEHSGHDRMVQTVRGTGYRFSTRF
>STY1271 phoP, transcriptional regulatory protein PhoP, regulator of virulence determinants
MMRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNEHLPDIAI
VDLGLPDEDGLSLIRRWRSSDVSLPVLVLTAREGWQDKVEVLSSGADDYV
TKPFHIEEVMARMQALMRRNSGLASQVINISPFQVDLSRRELSVNEEVIK
LTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRK
KIQAQYPHDVITTVRGQGYLFELR
>STY4491 pmrA, two-component response regulator
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVL
DLGLPDEDGLHFLTRIRQKKYTLPVLILTARDTLNDRISGLDVGADDYLV
KPFALEELHARIRALLRRHNNQGESELTVGNLTLNIGRHQAWRDGQELTL
TPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDK
VGKSRIRTVRRFGYMLVATEES
>STY2241 pocR, pdu/cob regulatory protein PocR
MISASALNSELINKIAQDFAQATTGLAVVVVNIHGDEISELFNFTPFCQL
MRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHL
VGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIA
SADLLKLIVENCLKKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALR
YIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSA
RELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSH
PPSI
>STY0399 prpR, propionate catabolism operon regulatory protein
MTTAHSAPRDNSDKPVIWTVSVTRLFELFRDISLEFDHLATITPIQLGFE
KAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQAL
AKAGKLTSSIGIVTYQETIPTLLAFQKTFHLCLEQRSYVTEEDARGQINE
LKANGIEAVVGAGLITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTR
RQRVDYPSGKGLQTRYELGDIRGQSPQMEQLRQTITLYARSRAAVLIQGE
TGTGKELAAQAIHQTFFHRQPHRQNKPSPPFVAVNCGAITESLLEAELFG
YEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKA
VTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSILRLTLPP
LRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWGWPGN
IRELRNMMERLALFLSVDPAPTLDRQFMRQLLPELMVNTAELTPSTVDAH
TLQDVLARFKGDKTAAARYLGISRTTLWRRLKAGAKDQSGN
>STY1371 pspA, phage shock protein A
MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSNSARA
LAEKKQLSRRIEQATAQQTEWQEKAELALRKDKDDLARAALIEKQKLTDL
IATLEQEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAASSSR
DVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHRFGKQQSLDQQFANL
KADDEISEQLAQLKAKMKQDNQ
>STY1373 pspC, phage shock protein C
MSGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLA
FFTVVAYIVLSFVLDPMPDNLAAGKPQPTSGELLDTVDRELAAGEKRLRE
MERYVTSDTFTLRSRFRQL
>STY1370 pspF, psp operon transcriptional activator PspF
MAEFKDNLLGEANCFLEVLEQVSRLAPLDKPVLIIGERGTGKELIANRLH
YLSSRWQGPLISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERAD
GGTLFLDELATAPMLVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNA
DLPAMVKEGTFRADLLDRLAFDVVQLPPLRERQSDIMLMAEHFAIQMCRE
LRLPLFPGFTDRAKETLLHYAWPGNVRELKNVVERSVYRHGSSEHPLDEI
VIDPFQRYPAEPPAPALPAASATPDLPLNLREFQLQQEKALLQRSLQQAK
FNQKRAADLLALTYHQFRALLKKHQL
>STY2674 ptsJ, putative transcriptional regulator
MIDGKTANEIFDSIRQHIIAGTLRAKDSLPPVRELASELKVNRNTVAAAY
KRLITAGLAQSLGRNGTVIKGSPSPVALEGGDPHTPLHDLSGGNPDPQRL
PDLSRYFARLSRTPHLYGDAPVSPELHAWAARWLRDATPVAGEIDITSGA
IDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDSEGMQ
PEKLEQALNQGARAVILTPRAHNPTGCSLSARRAAALQNILARYPQVLVI
IDDHFALLSSSPWQPVIAQTTQHWAVIRSVSKALGPDLRLAIVASDSSTS
AKLRLRLNAGSQWVSHLLQDLVYACLTDPEYQHRLAQTRLFYATRQQKLA
RALQQYGIAISPGDGVNAWLPLDTHSQATAFTLAKSGWLVREGEAFGVSA
PSHGLRITLSTLNDGEINTLAADIHQALNR
>STY1692 purR, purine nucleotide synthesis repressor
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAV
ARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNN
LEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLSMLEEYRHIPMVVMDWGEA
KADFTDTVIDNAFAGGYMAGRYLVERGHRDIGVIPGPLERNTGAGRLAGF
MKAMEEALINVPDNWIVQGDFEPESGYHAMQQILSQSHRPTAVFCGGDIM
AMGALCAADEMGLRVPQDVSVIGYDNVRNARFFTPALTTIHQPKDSLGET
AFNMLLDRIVNKREESQSIEVHPRLVERRSVADGPFRDYRR
>STY0624 ramA, transcriptional activator RamA
MTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFMQYKGES
LRRYVRERKLKLAARDLRDTDQKVYDICLKYGFDSQQTFTRIFTRTFNLP
PGAYRKEKHGRTH
>STY3891 rbsR, ribose operon repressor
MATMKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSAL
ARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGD
EQRMNRNLETLMQKRVDGLLLLCTETHQPSREIMERYPSIPTVMMDWSPF
DGEGDSDLIQDNSLLGGDLATQHLIDKGFTRIACITGPLDKTPARLRLEG
YRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQAVFTGNDA
MAVGAYQALYQAGLRIPQDMAVIGYDDIELARYMTPPLTTIHQPKDELGE
LAIDVLIHRMAQPALQQQRLQLTPVLTVRGSV
>STY2190 rcsA, colanic acid capsullar biosynthesis activation protein A
MSTIIMDLCSYTRLGLSGYLVSRGVKKREINDIETVDELAIACGAHQPSV
VFINEDCFIHTPSDSQQIKQIINQHPDTLFIVFMAIANVHFDEYLLVRKN
LLISSKSIKPDSLDTLLGDILKKESGISGTINLPTLSLSRTESSMLRMWM
EGQGTIQISDRMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN
GIFANMR
>STY2495 rcsB, regulator of capsule synthesis B component
MNNMNIIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA
HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLD
LDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR
LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIA
LLNYLSSVTLSPTDKE
>STY4048 recG, ATP-dependent DNA helicase
MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHL
YPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFN
AAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTP
VYPTTEGVKQATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRT
LHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRAGAQRYHTQP
LSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS
GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGW
LAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH
RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
LPPGRTPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLE
AQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS
PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVAD
LLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
>STY3094 relA, GTP pyrophosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHP
DADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVG
KSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVV
IKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELED
YCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVY
GRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELG
VAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQD
RDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGD
IRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVE
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPE
RIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASR
SDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>STY3582 rfaH, transcriptional activator RfaH
MQSWYLLYCKRGQLQRAQEHLERQAVSCLTPMITLEKMVRGKRTFVSEPL
FPNYLFVEFDPEVIHTTTINATRGVSHFVRFGAHPAIVPSSVIHQLSIYK
PEGVVDPETPYPGDSVIITEGAFEGLKAIFTEPDGETRSMLLLNLLNKEV
KQSVKNTGFRKI
>STY3824 rhaR, L-rhamnose operon transcriptional activator
MANQLILLKKDFFTDEQQAVTVADRYPQDVFAEHTHEFCELVMVWRGNGL
HVLNERPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLKLNVNW
QAMIPGFQGAQWHPHWRLGSMGMNQARQVINQLEHESNGRDPLANEMAEL
LFGQLVMTLKRHRYATDDLPATSRETLLDKLITALANSLECPFALDAFCQ
QEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMVSEISMQ
CGFEDSNYFSVVFTRETGMTPSQWRHLSNQSD
>STY3825 rhaS, L-rhamnose operon regulatory protein
MTVLHSVDFFPSGKAPVAIEPRLPQAAFPEHHHDFHEIVIVEHGTGIHVF
NGQPYTISGGTVCFVRDHDRHLYEHTDNLCLTNVLWRSPDAFQFLAGLDQ
LLPQEQDGYYPSHWRVNQSVLQQVRQLVGLMERAGDGMDAPAVANREILF
MQLLVLLRRSSLMEGATNNDAKLNQLMAWLEDHFAEEVCWEAVAEQFSLS
LRTLHRQLKQHTGLTPQRYLNRLRLIKARHLLRHSDHSVTEIAYRCGFGD
SNHFSTLFRREFNWSPRDIRQGRDAIIQ
>STY3640 rhlB, ATP-dependent RNA helicase
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVA
GQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQI
HADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK
QNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSAT
LSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL
IEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA
GASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLT
RSRPGNGPRRAGAPRNRRRSG
>STY0855 rhlE, putative ATP-dependent RNA helicase rhlE
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTG
KTAGFTLPLLQHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK
YLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQI
EILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDDIKALAEK
LLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMIGQGNWQQVLV
FTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC
VDEHKLLRDIEKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGG
RGRGQNQGGAGRSQQPRRQDSGAAKAKPKPRTGEGKPAGDKARPPRRPRR
ITPAQ
>STY3638 rho, transcription termination factor Rho
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIF
GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGK
IRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERG
NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHP
DCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKA
KRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIA
EKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLI
NKLAMTKTNDDFFEMMKRS
>STY1350 rnb, exoribonuclease II
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQ
MKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIV
PDHPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQY
ITFADDHFVPWWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTI
DSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSKLDNAAKIRAF
TNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLVYDNVSDWLENNSTWQPENEGIAQQIRLLHRICLSRSEW
RHHHALVFKDRPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCA
ARVLRDKLGFGIYNVHTGFDPANADALAALLKTHGLHVDAEEVLTLEGFC
KLRRELDAQPSGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIR
KYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRMAERDVGDWLY
ARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
>STY2827 rncS, ribonuclease III
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSF
VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGE
LKSGGFRRESILADTVEALIGGVFLDSNIQTVEQLILNWYKTRLDEISPG
DKQKDPKTRLQEYLQGHHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLSEP
VVGTGSSRRKAEQAAAEQALKKLELE
>STY0664 rnk, nucleoside diphosphate kinase regulator
MSRPTIIINDLDAERIDRLLEQPAYADLPIADALNAELDRAQMCSPQEMP
NDVVTMNSRVKFRNLSDGETRVRTLVYPANMTDSSTQLSVMAPVGAALLG
LRVGDTIHWELPGGASTHLEVLELEYQPEAAGDFLR
>STY4725 rnr, ribonuclease R (RNase R)
MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASREELAVELNIEGEE
QLEALRRRLRAMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGYGFLR
VEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTS
QIVGRYFTDAGVGFVVPDDSRLSFDILIPPEDVMGARMGFVVVVELTQRP
TRRTKAVGKIVEVLGDNMGTGMAVDMALRTHEIPYIWPQAVEQQVAGLKE
EVPEEAKVGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA
DVSYYVRPPTPLDREARNRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDR
LCMVCEMTISAKGRLTGYKFYEAVMSSHARLTYTKVWHMLQGDQDLREQY
APLVKHIEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQT
QRNDAHKLIEECMIMANISAARFVEKAKEPALFRIHDKPTTEAITSFRSV
LAELGLELPGGNKPEPRDYAELLESIADRPDAEMLQTMLLRSMKQAIYDP
ENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQGNKGNTTETG
GYHYSMEEMLQLGQHCSMAERRADEATRDVSDWLKCDFMLDQVGNVFKGV
IASVTGFGFFVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTY
RLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTAREKAKKGESKNA
GKRRQVGKKVNFEPDSAFRGEKKAKPKAAKKDARKAKKPSAKTQKIAAAT
KAKRAAKKKAAE
>STY4933 rob, right origin-binding protein
MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAI
GAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSQTP
ALYRRSPEWSAFGIRPPLRLGEFTVPEHQFVTLEDTPLLGVTQSYSCSLE
QISDFRHEMRVQFWHDFLGHSPTIPPVLYGLNETRPSMEKDDEQEVFYTT
ALPQEQADGYVQSAHPVLLQGGEYVMFTYEGLGTGVQDFILTVYGTCMPM
LNLTRRKGQDIERYYPSEDTKTGDRPINLRCEFLIPIRR
>STY0262 rof, ROF protein
MNETYQPINCDDYDSLELACMHHLILTLTLKDGEVLQAKANDLILRKNVE
YLLAEVSGESCELRLDKIASFSHPEIGTVVVSES
>STY4383 rpoA, DNA-directed RNA polymerase alpha subunit
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSS
MPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVIL
TLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGR
GYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDK
LVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFD
PILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
>STY3732 rpoB, DNA-directed RNA polymerase beta subunit
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLE
AAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKL
RLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLH
RSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDR
RRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQMELIPERLRGET
ASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVVSKD
YVDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISET
VRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAV
GRMKFNRSLLRDEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISA
AVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDV
HPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVVDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQV
DYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLV
GTGMERAVAVDSGVTAVAKRGGTVQYVDASRIVIKVNEDEMYPGEAGIDI
YNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNM
RVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEI
TADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSFLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEE
MQLKQAKKDLSEELQILEAGLFSRIRAVLVSGGVEAEKLDKLPRDRWLEL
GLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIV
KVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNP
LGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYD
LGADVRQKVDLSTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGS
YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNG
RTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE
>STY3731 rpoC, DNA-directed RNA polymerase beta' subunit
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFK
PERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRE
RMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGG
MTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECET
LREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKM
VEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII
VPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKV
RITEYEKDENGEFVAHTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKK
HEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDN
LQTETVINRDGQEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVTEDDCGTHEGILMTPVIEGGDVKEPLRDRVLGRVTAEDVLK
PGTADILVPRNTLLHEQWCDLLEANSVDAVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSI
QVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYG
AVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFIRFTDMIDGQTITRQT
DELTGLSSLVVLDSAERTTGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF
LPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRP
KEPAILAEIAGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKIND
KHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGA
TFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKEN
VIVGRLIPAGTGYAYHQDRMRRRAAGEQPATPQVTAEDASASLAELLNAG
LGGSDNE
>STY3390 rpoD, RNA polymerase sigma factor
MPHIVREAPDSRSERQRPKYKYALALNVDSYTVDTNQTNKCGYRLMEQNP
QSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQV
MEEAPDADDLLLAENTTSTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMR
EMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEA
EEARLSDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDDEDEDEEDGDD
DAADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLS
EVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFI
TLFTGNETSETWFNAAIAMNKPWSEKLHDVAEEVQRCLQKLRQIEEETGL
TIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLD
LIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIP
VHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKE
PISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTA
REAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSR
SEVLRSFLDD
>STY2833 rpoE, RNA polymerase sigma-70 factor
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVV
QESFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDA
IEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRE
LDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
>STY4243 rpoH, RNA polymerase sigma factor
MTKEMQNLALAPVGNLESYIRAANAWPMLSADEERALAERLHYQGDLEAA
KTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVR
LVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFN
QDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLY
LQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNK
STLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>STY3499 rpoN, DNA-directed RNA polymerase subunit N
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQT
DLHDEIDTQQPQDDDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGP
SGDYIDDELPVYQGETTQSLQDYLMWQVELTPFSDTDRAIATSIVDAVDD
TGYLTVSLDEIRESMGDVEVDLDEVEAVLKRIQRFDPVGVAAKDLRDCLL
IQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTRLKEEVLKEAV
NLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQ
QQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELK
YFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
IMVARRTVAKYRESLSIPPSNQRKQLV
>STY3049 rpoS, RNA polymerase sigma factor
MSQNTLKVHDLNEDAEFDENGVEAFDEKALSEEEPSDNDLAEEELLSQGA
TQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLR
LVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWI
RQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAE
QLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTT
QDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
>STY4051 rpoZ, DNA-directed RNA polymerase omega subunit
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIA
LREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR
>STY3720 rsD, putative regulatory protein
MLNQLENLMERVGGSNKLVDRWLDVRKHLLVAYYNLVGIKPGKESYMRLN
EKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLLHAAKIWPLLEDNT
QRIMDYYDTSLETAIDHDNCLEFQQALSDIGEALEARFVLEDKLIMLVFD
AMHDGARVKRPA
>STY1647 rstA, putative two-component response regulator
MNRIVFVEDDAEVGSLIAAYLAKHDIDVIVEPRGDRAEDLILITQPDLVL
LDIMLPGKDGMTICRDLRHRWQGPIVLLTSLDSDMNHILALEMGACDYIL
KTTPPAVLLARLRLHLRQSEQTQQAKSLQESALTPHKALRFGALTIDPLN
RAVQLNGDFISLSTADFELLWELATHAGQIMDRDALLKTLRGVNYDGLDR
SVDVAISRLRKKLLDSAAEPYRIKTIRNKGYLFAPHAWDETTG
>STY2158 sdiA, cell-division regulatory protein
MQENDFFTWRRAMLLRFQEMAAAEDVYTELQYQTQRLEFDYYALCVRHPV
PFTRPKISLRTTYPQAWVTHYQSENYFAIDPVLKPENFRQGHLHWDDVLF
HEAQAMWDAAQRFGLRRGVTQCVMLPNRALGFLSFSRSSLRCSSFTYDEV
ELRLQLLARESLSALTRLEDDMVMAPEMRFSKREKEILKWTAEGKTSSEI
AIILSISENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI
>STY0341 sinR, LysR-family transcriptional regulator SinR
MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIE
VTLLRRDSHHLELTGAGQTAYASMKRITSSFQSLLDELRNPDKIIRGSIK
FSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVF
KSGIIESEDLVYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLH
NHGLSGPLTLFRQEESYTISGAVNVHLSSNNLLSVLNLVLEGKGINLMTP
AWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIED
KWNNRPQIDFLNDD
>STY2155 sirA, response regulator
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEACCGEDAVKWCRTNAVDV
VLMDMNMPGIGGLEATRKIARSTADIKVIMLTVHTENPLPAKVMQAGAAG
YLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPAKTETPFASL
SERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVEL
THLAIRHGLCNAETLTSQ
>STY4062 slmA, nucleoid occlusion protein
MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYR
HFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTSTRLRLIVLLILGFGE
RNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEG
YTTDKNLLASQLLAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ
>STY1678 slyA, transcriptional regulator SlyA
MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQI
QLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI
AEMEEVIHKTRGEILAGISSEEIELLIKLVAKLEHNIMELHSHD
>STY3045 slyA, putative regulatory protein
MELRNTAFHLLRQLFQQHTARWQHELPELTKPQYAVMRVIAEHPGIEQVD
LTEAAVSTKATLAEMLSRMENRGLVKRENDPLDKRRRFVYLTVQGQTLLA
AAIPLGDRVDDEFLGRLSAEEREQFTQLVRKMMT
>STY3073 sopD, possible secreted protein
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKD
HALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFT
IKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQI
CEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPL
VEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCI
SYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHE
RSLHIGKDGCSRNILLT
>STY4464 soxR, SoxR protein
MEKKSPRLKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYK
RDVLRYVAIIKIAQRIGIPLATIGDAFGILPEGHTLSAKEWKQLSSQWRE
ELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEHGTGARLLE
DD
>STY4463 soxS, regulatory protein SoxS
MSHQQIIQTLIEWIDEHINQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTL
GEYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRREFDRTP
SDYRHRL
>STY4050 spoT, guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPV
AVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV
SKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKE
VVRAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLK
EQRFHSIMDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTT
AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL
PAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKL
AEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGEAVVPT
VAQSNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESC
RNIRGYQKEPEKFMAVEWDKETEQEFITEIKVEMFNHQGALANLTAAINT
TTSNIQSLNTEEKDGRVYSTFIRLTARDRVHLANIMRKIRVMPDVIKVTR
NRN
>STY2988 sprA, possible AraC-family transcriptional regulator
MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGS
LRIENEFGEFIEQSALCLFLLEKDQTITLSMSEIEGHIDFSSLEVSYDLM
QKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACP
RVCSNVSIDDHDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNI
IISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIYLDARMNQAIK
LLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH
>STY2987 sprB, possible AraC-family transcriptional regulator
MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLSDMPDAG
LILALNPHEHVYLFHALQARLQNRKVLVVADRLYYIDRCVLQYFGVMDYV
LKDELSCAIRSEREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVL
FNINQYAWWNLPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYR
KKVMYRLGMDSSPLSLFRGLKLDAHLQRTAFAHNPAVPDDNCALPIAVGM
N
>STY2957 srlM, glucitol operon activator protein
MVSTLITVAVIAWCAQLALGGWQISRFNRAFDKLSQQGRVGVGRSGGRFK
PRVVVAVALDEQQRVTDTLLMKGLTVFARPVKIAAMQGKHLHELQPDVIF
PHDSLAQNALSLALKLKHG
>STY2959 srlR, glucitol operon repressor
MKPRQRQAAILEHLQKQGKCSVEELAQYFDTTGTTIRKDLVILENAGTVI
RTYGGVVLNKEESDPPIDHKTLINTHKKALIAAAAVKYIHDGDSIILDAG
STVLQMVPLLSRFSNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSA
SFHGQLAENAFEQFSFDKLFMGTDGIDLNVGVTTFNEVYTVSNAMCNAAR
EVILMADSSKFGRKSPNVVCSLETVDKLITDAGIDPAFRQALEAKGIEVI
ITGESNE
>STY2836 srmB, ATP-dependent RNA helicase SrmB
MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPT
GTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELA
KHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRA
VETLILDEADRMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFA
ERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLKHLLKQDDATR
SIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAIS
LVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA
KRAEKKKEKEKEKPRVKKRYRDTKNIGKRRKPSGTKMQEQSSEE
>STY1729 ssrB, putative two-component response regulator
MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEP
DILILDLSLPGINGLDIIPQLHQRWPAMNILVYTAYQQEYMTIKTLAAGA
NGYVLKSSSQQVLLAALQTVAVNKRYIDPTLNREAILAELNADTTNHQLL
TLRERQVLKLIDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTEL
LNCARRMRLIEY
>STY2904 tctD, transcriptional regulator
MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHSEMYALMVL
DINMPGMDGLEVVQRLRKRGQTLPVLLLTARSAVADRVKGLNVGADDYLP
KPFELEELDARLRALLRRSAGLVHEVQQLGELIFHDEGYFLLQGQPLALT
PREQALLTVLMYRRTRPVSRQQLFEQVFSLNDEVSPESIELYIHRLRKKL
QGSDVRITTLRGLGYVLERGDEVG
>STY3428 tdcA, TDC operon transcriptional activator
MNTLVLPKTQHLVVFQEVIRSGSIGSAAKSLGLTQPAVSKIISDVEAYFG
VELIVRKNTGVTLTEAGQVLLSWSESITREMKNMINEMNSMTCNTVVDVS
FGFPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFA
IGTLSNEMQLQDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWALP
QTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDM
TTPFGSNQFITIPIKDTLPVARYAAVWSKNYRIKKAASVLVELAKQYSSY
NGCRRRQLIEIE
>STY0349 tinR, transcriptional regulator
MTVYLDDKDKELLKEIQKDCAQTLWQLAYKVGLTPTPCFKRLKKLKDRGV
IIGQFALLDKEKLGLSLNVFIMINISEEQYASISEKIKSMPEVIAFYRIS
GSFNYLMHTVFTDMNDYYSFYEKIILTNSSISGSASSFVLEQIKETNELP
V
>STY4795 treR, trehalose repressor
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSKRTRERVEAVMNQHGFSP
SRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMES
QFSPMLVMEHLGMLRRRNIDGVVLFGFTGITEELIAPWKASLVLLARDAQ
GFASVCYDDEGAIHILMQRLYEQGHRNISFLGVPHSDITTGKRRHDAYLA
FCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCATDTLALGASKY
LQEQRIETLQLASIGNTPLIKFLHPEIVTVDPGYAEAGRQAALQLIEQIN
GRCDPRRIVIPSTLA
>STY4930 trpR, Trp operon repressor
MTQHSPYSSAIAEQRNQEWLRFVELLRQAYAEDLHLPLLQLMLTPDEREA
LGTRVRIIEELLRGEMSQRELKTELGAGIATITRGSNSLKSAPVELRHWL
EQILLKSA
>STY1378 tyrR, transcriptional regulatory protein TyrR
MRLEVFCEDRLGLTRELLDLLVLRSIDLRGIEIDPIGRIYLNFAELEFTD
FSSLMAEIRRISGVTDVRTVPWMPSEREHLALSALLEALPEPVLSLDMKS
KVEMANPASCQLFAQSQERMRHHTAAQLINGFNFQRWLDGNPQSSHNEHV
VINGQNFLMEITPVHLQNENDEYVLTGAVVMLRSTIRMGQQLQNLSTQDL
SAFSQIIAVSAKMKHVVEQARKLAMLSAPLLITGDTGTGKDLFAYACHQA
SPRSAKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI
GEMSPRMQAKLLRFLNDGTFRRVGEDHEIHVDVRVICATQKNLVELVQKG
LFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLS
ADLSTVLTRYGWPGNVRQLKNAIYRALTQLEGYELRPQDILLPDYDAATV
AVGEDAMEGSLDDITSRFERSVLTQLYRSYPSTRKLAKRLGVSHTAIANK
LREYGLSQKKGEE
>STY3992 uhpA, Two-component system response regulator protein
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQV
CICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS
KRCSPDELIAAVHTVATGGCYLTPDIAVKLAAGRQDPLTKRERQVEEKLA
QGMAVKEIAAELGLSPKMVHVHRANLLEKLGVSNDVELAHRMFDGW
>STY2206 umuD, UmuD protein
MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSS
TYFVKATGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQ
LRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
>STY4862 uxuR, uxu operon transcriptional regulator
MKSNTSQQRPYQEVGAMIRDLIVQTPYRPGERLPPEREIAERLNVTRTVV
REALIMLEIKGLVEVRRGAGIYVLDSADNNEMEGADVNHCNDAGPFELLQ
ARQLLESNIAEFAALQATREDIIKMRQALQLEERELASSAPGGSESGDMQ
FHLAIAEATHNSMLVELFRQSWQWRENNPMWLQLHSHLGDTLYRKEWLGD
HKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDIYFDGYLFESW
PLDNVDA
>STY2655 xapR, xanthosine operon transcriptional regulator
MERAHRIDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELEQQLG
TLLFIRHSRSVALTHAGKVLMEESRRLLANANQALARVEQIGRGEAGRIE
LGVVGTALWGRMRPAMRHFLKANPNVEVLFREKSPGMQMALLERRELDAG
IWRMAIEPAVGFTSIRLHESAFMVAVPEDHDLASRDSVPLSALRNEYFVT
LPSVHSDWGFLQRVCQQAGFSPMIIREVVEPQTVLAMISMGIGITLMADG
YAQMSWPGVVFRPLEERIPADLYIVYDQQQATPALEKLVAALTV
>STY4136 xylR, xylose operon regulatory protein
MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID
NIKEWLGDGVIADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIA
TDNHALVESAFLHLKEKGVNRFAFYGLPDSSRKHWAAEREYAFRQLVAEE
KYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHVLQ
ACEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL
HRLLAREEMPLQRILVPPVRVIARRSTDYRSLTDPAVIQAMHFIRNHACK
GIKVEQVLDAVGISRSNLEKRFKEEVGETIHALIHAEKLEKARSLLISTT
LAINEISQMCGYPSLQYFYSVFKKEYVTTPKEYRDQHSEALL
>STY0232 yaeG, hypothetical protein
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEG
ALLVLSQGRVVDIDNAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPEH
LRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALV
EWAQRLGIDLNQPRVAAVVEVDSGQLGVDSAMAELQQLQNALTTPERNNL
IAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLISRMKENGQLRFRVAL
GNYFTGPGSIARSYRTARTTMMVGKQRMPESRSYFYQDLMLPVLLDSLRG
GWQANELARPLVKLKAMDNNGLLRRTLTAWFRHNVQPLATSKALFIHRNT
LEYRLNRISELTGLDLGNFDDRLLLYVALQLDEQR
>STY0277 yafC, hypothetical transcriptional regulator
MKATSEELAIFVAVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLL
NRTTRQLSLTEEGERYFRRVQQILQEMAAAETEIMESRNTPRGLLRIDAA
TPVMLHFLMPLIKPFRERYPEITLSLVSSETFINLIERKVDVAIRAGTLT
DSSLRARPLFTSYRKVIASPDYIARFGKPESVEELKQHLCLGFSEPISLN
TWPIACSDGQLHEIECGISSNSGETLKQLCLNGNGIACLSDYMIDKEIAR
GELVELLADKRLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEYIRTAPAGA
VKEG
>STY4148 yafP, putative acetyltransferase
MKIRRFSNGDEISLFRVFFSSVHTIASHYYTREQIDAWAPADIDLERWAN
HIKELQPFVVELDGEIAGYADVQPNGYIDHFFVSGTYSRQGVGTLLMNCI
HEEARQRGISELTSNVSKAAEVFFLRHGFHIVERGFPICRGVTLQNALMR
KCLAK
>STY0426 yajF, hypothetical ROK-family protein
MRIGIDLGGTKTEVIALDDAGEQRFRHRLPTPREDYQQTIETIATLVDMA
EQATGQTGSVGIGIPGSLSPYTGVVKNANSTWLNGQPFDSDVSRRLKREV
RLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVALNGRAHIGGNG
TAGEWGHNPLPWMDDDELRYREEIPCYCGKQGCIETFISGTGFATDYQRL
SGKTLKGDEIIRLVDAQDAVAELAISRYELRLAKALSHVVNILDPDVIVL
GGGMSNVERLYKTVPSLMKSFVFGGECETPVRKARHGDSSGVRGAAWLWP
LA
>STY0502 ybaO, hypothetical transcriptional regulator
MLDKIDRKLLCLLQQDCTLSLQALADAVNLTTTPCWKRLKRLEDDGILLG
RVALLDPEKLGLGLTAFVLIKTQHHSSEWYCRFVTVVSEMPEVLGFWRMA
GEYDYLMRVQVADMKRYDDFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLP
IE
>STY0651 ybdO, putative lysR-family transcriptional regulator
MANLYDLKKFDLNLLVIFECIYQHLSISKAAETLYITPSAVSQSLQRLRT
QFNDPLFIRSGKGITPTVTGINLHYHLENNLNSLEQTINIMNQSSLKKKF
IIYSPQLLITQYAMKLVKYIRKDPQVEIEHHDILTTDELPEDLLAYRKAD
VVVSMAPLNNRSIVCTHFNRLECILVCSENHPRLGDTATIDEILQESFTQ
LVSRATGMKEYHSLIDDVLGERIIGLRSKSVMTIANSISSTELIGFLPQT
FVDYYSSSIKLKKVATPFTIAPIQFYLMYNRASLNNSGFAELIEYITKKR
>STY0684 ybeF, lysR-family transcriptional regulator
MSDNNQAERQPADQHLQDKPQIFRTLRNIDLNLLTIFEAVYVHKGIVNAA
KILNLTPSAISQSIQKLRTIFPDPLFIRKGQGVTPTTYATHLHEYISQGL
ESILGALDLTGSYDKQRTITIGTTPSVGALVMPIIYQAIRPRYPQLLLRN
IPVDDAESQLSQFQTDLIINTHSYNNRSIQHHVLFSDTLEIVCRQHHPCL
ANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTI
ASLIASSDLLGLMPTRFYDLFSRCWPLERLPYAPVNSEQVEFSLHYNKLS
LRDPVLENVIDIIREAF
>STY0854 ybiH, hypothetical tetR-family transcriptional regulator
MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITY
YFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELIL
LACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTYLTR
LVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKA
ELIYQTVTCHIDLILHGLTQRSLD
>STY3797 ydeW, putative regulatory protein
MSDNTLVSDYGMCEEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLL
EKGHQSGIIRVQINSRFEGCLEYENALRNHFALQNIRVLPALPDADIGLR
LGIGAAHMLMESLRPQQLLAVGFGEATMTTLKRLSGFISAQQIRLVTLSG
GVGPYMTGIGQLDAACSVSIMPAPLRASSQEIACTLRNENSVRDVMLTAQ
AADAAIVGIGAINQKDQASILKSGYITQGEQLMIGRKGAVGDILGYFFDA
HGEIIPDIKIHNELIGLKLNSLSTIPTVIGVAGGEQKAEAIIAAMRGNYI
NALVTDQKTAGKIIQLIEK
>STY1693 ydhB, putative transcriptional regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFV
RRHRDVELTPAGVWFLKEGRSVIKKMQITRQQCQQIANGWRGQLAIAVDN
IVRPERTRQMIVDFYRHFDDVEMLVFHEVFNGVWDALSDGRVELAIGATQ
AIPVGGRYAFRDMGTLSWSCVVASDHPLASMPGPLSDDTLRNWPSLVRED
TSRTLPKRITWLLDNQKRVVVPDWESSATCLSAGLCVGMVPTHFARQWID
SGKWVALTLENPFPDAACCVTWQQNEASPALAWMLDYLGDSETLNREWLR
EPEEAPDSGD
>STY2388 yehT, putative two-component system response regulator
MIKVLIVDDEPLARENLRILLQGQDDIEIVGECANAVEAIGAVHKLRPDV
LFLDIQMPRISGLEIVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLL
KPIEEKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQM
DDVAFVSSRMSGVYVTSSEGKEGFTELTLRTLESRTPLLRCHRQFLVNMA
HLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
>STY2390 yehV, putative transcriptional regulator
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRI
REIKRWIDNGVQVSKVKVLLSSDSSEQPNGWREQQEILLHYLQSSNLHSL
RLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYI
ALCLASARKKQGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLS
QFRPELFDGKTLLVWCGEHQTLAQQQQLLAWRAQGHDIHPLGV
>STY2436 yeiE, putative transcriptional regulator
MHITLRQLEVFAEVLKSGSTTQASVMLSLSQSAVSAALTDLEGQLGVQLF
DRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRVYASSTIG
NYILPAMIARYRQHYPALPLELSVGNSQDVINAVLDFRVDIGLIEGPCHS
TEIISEPWLEDELVVFAAPSSPLTQGPVTLEQLAASPWILRERGSGTREI
VDYLLLSHLPRFHMAMELGNSEAIKHAVRHGLGISCLSRRVIAEQLQAGT
LGEVAVPLPRLVRTLWRVHHRQKHLSNALQRFLSYCE
>STY2460 yejH, putative helicase
MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARG
RVLVLAHVKELVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSV
ARNLDAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLT
ATPFRLGKGWIYQFHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPE
RLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAQ
TRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTD
CLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTAD
GTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
CDAILVDPDDMLKAALRLKDALVLRCSGMTMQHGQDEKGEWLKITYYDED
GADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALL
RHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
>STY2691 yfeG, ethanolamine operon transcriptional regulator
MKKTRTANLHHLYHEALPEDVKLTPRVEVDNVHQRRTTDVYEHALTITAW
QQIYDQLHLGKFHGEFTEILLDEIQVFREYTGLALRQSCLVWPNSFWFGI
PATRGEQGFIGAQGLGSAEIATRPGGTEFELSTPDDYTILGVVISEDVIS
RQATFLHNPERVLHMLRNQLALEVKEQHKAALWGFVQQALATFSESPETL
HQPAVRKVLSDNLLLAMGTMLEEAKPIHSAESISHQGYRRLLSRAREYVL
ENMSEPLTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE
LISPWSQSTTVRDAAMQWGFWHLGQFATDYQQLFAEKPSLTLHQRMRQWA
>STY2818 yfhH, putative transcriptional regulator
MNCLIRIRQRYPDLAQSDRKLADYLLAQPDTARHLSSQQLAAEAGVSQSS
VVKFAQKLGFKGFPALKLAISEALASNPNPHSVPVHNQIRGDDPMRLVGE
KLIKENVAAMHATLDVNSEEKLLESVTMLRHARRIVITGIGASGLVAQNF
AWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERRELNLAAD
ETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHAQMM
LTDLLFMALVQQDLERAPERIRHSEALVKKLV
>STY2790 yfhP, hypothetical protein
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLR
KNGLVSSVRGPGGGYLLGKDAGSIAVGEVISAVDESVDATRCQGKGGCQG
GDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRA
SGRAQDAIDVKLRA
>STY2961 ygaA, anaerobic nitric oxide reductase transcription regulator
MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQ
FIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDG
LIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVA
ALAAGALSNALLIEQLESQNMLPGSSGVFEPIKETHMIGLSPAMTQLKKE
IEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPES
VAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSV
FPLFVPPLRERGDDVVLLAGYFCEQCRLRLGLSRVVLSPGARRHLLNYGW
PGNVRELEHAIHRAVVLARATRAGDEVVLEEQHFALSEDVLPAPSAESFL
ALPACRNLRESTENFQREMIRQALAQNNHNWAASARALETDVANLHRLAK
RLGLKD
>STY2914 ygaE, putative transcriptional regulator
MTALSQPTAIDGYRWLKNDIIRGTYQPDEKLRMSLLTARYALGVGPLREA
LSQLVAERLVTVVNQKGYRVASMSEAELLDIFDARANMEAMLVRLAIERG
DDAWEAEILARAHMLSKLEASDASEHMLDEWDQRHQAFHSAIVAGCGSHY
LLQMRERLFDLAARYRFIWLRETVLSVEMLEDKHIQHHTLTEAILAREAA
RASELMRQHLLTPIPIIRQAMAGKM
>STY3848 ygjM, hypothetical protein
MRTHRQMDATSAKKIVDTFSDAVKSVPLMGEDRNDNEYRRALALVEFLVD
HDDLENPLFELLCARISEYEKHAPEFKALNQHLEKTPPGVSVLRTLMDQY
GLKAADLANELGSKSNVSNILNGRRALTVNHIKALTQRFKLPADAFIE
>STY4247 yhhK, hypothetical protein
MKLTILRLEHFSAQDQIDLGKIWPEYSASSLSVDETHRIYAARFNERLLG
AVRVTLSGTQGALDSLRVREITRRRGVGQYLVEEVIRDNPNVSSWWMADV
GVEDRSVMAAFMQALGFTAQHDGWEKR
>STY4197 yhjB, hypothetical luxR-family transcriptional regulator
MQVIMFDRQSIFIHGMKISLQQHIPGISIQSVGQAEELWQKIESAPDALV
MLDSGLDAEFCREVLQRTAQQFPEVKIIITAMDGSQKWLHEVMQFNVQVV
VPRDSDAETFVLALNTVARGMMFLPGDWLNSTELESHDIKALSARQREIL
QMLAAGESNKQIGRALNISTGTVKAHLESLYRRLDVKNRTQAAMMLNESN
>STY4196 yhjC, hypothetical lysR-family transcriptional regulator
MMDKIYAMKLFVRVAERESFSRAAEDIGLPKGSVSRQIQALEHQLGIRLL
HRTTRRVQLTQDGMVYYERAKDLLSNLDELEGLFQPDPASISGKIRVDIP
PGLANSLIMPRLLTFLHQYPGIALELCSSDRQVDLLREDFDCVVRTEPLH
APGILTRPLGKLRRVNCASPQYLARFGYPENLDDLASHAMVHYSLTPGVS
SPGFAFETPHGMQWVKTGGMLTVNSTETWHTACLAGLGIIQTPRIAVREA
LRAGALIEILPQYRAAPLPVTLHYPHRRNLSRRVHLFMVWLTETIKEAAE
>STY4159 yiaC, putative acetyltransferase
MIRKSQSEDMASILALWMKSTIYAHPFIEERYWHESEAIVRDVYLPAAQT
WVWEENGQLKGFVSVLEARFVGALFVAPDALRHGIGKALLEYVQQRFPLL
SLEVYQKNQSAVNFYHALGFRIEDSAWQEDTSHPTWIMSWQADQTP
>STY4131 yiaJ, putative transcriptional regulator
MSQNNDKEKPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH
RLLQGLQSCGYVTPAPAAGSYRLTTKFIAVGQKALSSLNIIHVAAPHLEA
LNLATGETVNFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
KIYMAFGQPDYVASYWESHKDQIQPLTRNTITDLPAMYDELAQIRETSMA
MDREENELGVSCIAVPVFDIHHRVPYAISISLSTSRLKQIGEKNLLKPLR
ETAQAISNELGFTVRE
>STY3935 yidZ, putative LysR-family transcriptional regulator
MQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNTPLGLAPTPLMV
SMEQSLADWMQMGNQLLDKPHHQTPRGLKFELAAESPLMMIMFNSLSQQI
YQRYPQATIKVRNWDYDSLEAITRGKVDIGFTGRESHPRSRELISLLPLA
IDFEVLFSDLPWVWLQEDHPALREAWDLDTFLRYPHISICWEQSDTWALD
DVLQEMGRKRHIALSLPGFEQSLFMAAQPGHTLIATAPRYCQHYNQLHQL
PLVARPLPFDAQQREKLMVPFTLLWHKRNSHNPKIVWLRQAINTLCRRLI
>STY3853 yihW, putative DeoR-family transcriptional regulator
MSLTELTGNPRHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSE
QGLITRHHGGAGRASSVVNTAFEQREISWTQEKKAIAEAVADYIPDGSTI
FITIGTTVEQVARALLNHNHLRIITNSLRVAHILYNNPRFEVMVPGGTLR
PHNSGIIGPSAAAFVAGFRADYLVTSVGAIESDGALLEFDVNEASVVKTM
MAHSRHILLAADHTKYHASAAVEIGNVSQITALFTDEYPGPALQNLLQSQ
QIEVVQVSPSLDDAVSA
>STY3849 yiiD, putative acetyltransferase
MSQLPAWPRITRESTAMYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGS
ERDGWDALAHHQMVVDEEGNLVAVGRLYINADNEASIRFMAVHPSVQDKG
LGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTT
PIRHFLMIKPVASLDDILHRGDWCGQLQQAWYEHIPLSEKMGVRIQQYTG
QKFITTMPETGNQNPHHTVFAGSLFSLATLTGWGLIWLMLRERHLGGTII
LADAHIRYSKPISGKPNAVADLGSLSGDLDRLARGKKARVQLQVELLGGE
TAGAIFEGIYIVLPAKPFGPYEEGGNEEE
>STY3845 yiiF, putative CopG-family DNA-binding protein
MSMMAGMDMGRILLDLSDDVIKRLDDLKVQRNLPRAELLREAVEQYLERQ
DRAETTISKALGLWQGCEEDGVEYQRKLREEW
>STY3747 yijC, possible TetR-family trancriptional regulatory protein
MMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFY
RHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFI
GNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAF
TEAQAEAMVTIVFSAGAEALDIGAEQRRQLEERLVLQLRMIAKGAYYWYR
REQEKIAHHSE
>STY3756 yijO, putative AraC-family transcriptional regulator
MYHDVSHLLSRLINGPLPLRQIYFASASGPAPELAYQVDFPRLEIVLEGE
LTDMSITAPLIPCDVLYVPAGGWNIPQWQTPVTTLSILFGKQQLGFSVVY
WDGQQHQNLTKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLL
SHCRDLLGSQIQTASRSRALFEAIREYIDERYAAPLTRESVAQAFYISPN
YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHRCGFVDSN
YFCRLFRKNTERSPSEYRRQYHSQLTEK
>STY4399 yjaB, putative acetyltransferase
MMINIRRSRREEGEKLIAIWRRSVDATHDFLSNAYRAELEELVSDFLPEA
PLWVAVTDQDEPVGFMLLTGEHMDALFIDPDVRGQGIGKMLVEHALTLAP
GLTTNVNEQNTQAVGFYKKMGFKVTGRSEVDDLGKPYPLLNLIYP
>STY4681 yjdC, putative transcriptional regulator
MQREDILGEALKLLETQGIADTTLEMVAERVNRPLDTLQRFWPDKEAILY
DALRYLSQQVDIWRRQLLLDETFSAEQKLLARYSALSECVSNNRYPGCLF
IAACTFYPDPTHPIHQLANQQKRAAHDFTHGLLTTLEIDDPAMVARQMEL
VLEGCLSRMLVNRSQADVDTAQRLAEDILRFAQCRQGGALT
>STY4724 yjeB, hypothetical protein
MQLTSFTDYGLRALIYMASLPDGRMTSISEVTEVYDVSRNHMVKIINQLS
RAGFVTAVRGKNGGIRLGKPANTICIGDVVRELEPLSLVNCSSEFCHITP
ACRLKQALSKAVQSFLKELDNYTLADLVEENQPLYKLLLVE
>STY4737 yjfQ, probable transcriptional regulator
MTEAQRHQILLDMLAQLGFVTVENVIERLGISPATARRDINKLDESGKLK
KVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVIN
CGSTAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQS
ITLSPQGSENSLYAGHWMFTSGKGLTADGLYKTDMLTAMAEQKMLSVVGK
LVALVDSSKIGERAGMLFSRADQIAMLITGKNANPQVLQQLEAQGVSILR
V
>STY0611 ykgD, hypothetical araC-family transcriptional regulator
MDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTVTQGEAQ
LEMPTGDAMTLTPGKVVILPQNSAHRLRQSGEAPTHIVCGSLRLHTTSRY
FLTALPEVLCLAPPPHSPASIWLNAAISLLQQESERHLPGADVLYSQQCA
TLFTLAIRDWLSQAGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVETLV
QRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAE
SVGYASESSFHKAFVREFGCTPGEYRKRVNALGR
>STY4760 ytfH, hypothetical protein
MRAHTLSRQLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSD
LRRKMGGVSEKMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVS
DKVAALADWIELNLPQVLAQRERLSDGG
>STY4386 zntR, zinc-responsive transcriptional regulator
MYRIGELAKLADVTPDTIRYYEKQQMMDHEVRTEGGFRLYTENDLQRLKF
IRYARQLGFTLESIRELLSIRIDPEHHTCQESKSIVQERLQEVEARIAEL
QTMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGAKSVC