Gene list
Applied filters:
COG category: Unclassified
Gene type: CDS
Genomic element: pSS_046
Number of genes found: 69
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella sonnei Ss046, Ss046 | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SSO_P040 | IS1294 ORF | pSS_046 | CDS | 35770 | 1200 | + | 0.575 |
NA | SSO_P220 | IS1294 ORF | pSS_046 | CDS | 191333 | 1209 | - | 0.574855 |
NA | SSO_P156 | hypothetical protein | pSS_046 | CDS | 137720 | 639 | - | 0.370892 |
NA | SSO_P240 | hypothetical protein | pSS_046 | CDS | 210796 | 693 | - | 0.344877 |
NA | SSO_P148 | hypothetical protein | pSS_046 | CDS | 133174 | 186 | + | 0.424731 |
NA | SSO_P206 | hypothetical protein | pSS_046 | CDS | 182317 | 192 | + | 0.520833 |
NA | SSO_P215 | putative IS91 ORF2 | pSS_046 | CDS | 189314 | 186 | - | 0.591398 |
NA | SSO_P078 | hypothetical protein | pSS_046 | CDS | 71581 | 294 | + | 0.561224 |
NA | SSO_P185 | hypothetical protein | pSS_046 | CDS | 162929 | 429 | + | 0.599068 |
NA | SSO_P048 | IS1294 ORF | pSS_046 | CDS | 42626 | 1209 | + | 0.574028 |
NA | SSO_P211 | putative transposase | pSS_046 | CDS | 185165 | 168 | + | 0.482143 |
NA | SSO_P057 | hypothetical protein | pSS_046 | CDS | 52274 | 252 | - | 0.436508 |
NA | SSO_P135 | IS91 ORF | pSS_046 | CDS | 121226 | 357 | - | 0.52381 |
NA | SSO_P209 | IS1294 ORF | pSS_046 | CDS | 183349 | 1200 | - | 0.575 |
NA | SSO_P069 | IS1294 ORF | pSS_046 | CDS | 65173 | 915 | - | 0.571585 |
NA | SSO_P015 | putative IS91 ORF2 | pSS_046 | CDS | 12450 | 186 | - | 0.537634 |
NA | SSO_P126 | hypothetical protein | pSS_046 | CDS | 115155 | 717 | - | 0.316597 |
NA | SSO_P023 | hypothetical protein | pSS_046 | CDS | 18113 | 225 | - | 0.515556 |
NA | SSO_P011 | hypothetical protein | pSS_046 | CDS | 9390 | 579 | - | 0.312608 |
NA | SSO_P219 | putative IS91 ORF2 | pSS_046 | CDS | 190770 | 234 | - | 0.448718 |
NA | SSO_P070 | hypothetical protein | pSS_046 | CDS | 66068 | 273 | - | 0.498168 |
NA | SSO_P005 | hypothetical protein | pSS_046 | CDS | 3363 | 219 | + | 0.378995 |
NA | SSO_P020 | putative transposase, fragment | pSS_046 | CDS | 16042 | 159 | + | 0.339623 |
NA | SSO_P214 | IS91 ORF | pSS_046 | CDS | 188127 | 1074 | - | 0.549348 |
NA | SSO_P136 | putative IS91 ORF2 | pSS_046 | CDS | 121582 | 423 | - | 0.472813 |
NA | SSO_P187 | putative antirestriction protein | pSS_046 | CDS | 164665 | 348 | + | 0.543103 |
NA | SSO_P222 | hypothetical protein | pSS_046 | CDS | 192522 | 273 | - | 0.498168 |
NA | SSO_P195 | oriT nicking and unwinding protein, fragment | pSS_046 | CDS | 175043 | 837 | + | 0.622461 |
NA | SSO_P238 | putative IS91 ORF2 | pSS_046 | CDS | 209503 | 366 | - | 0.530055 |
NA | SSO_P047 | hypothetical protein | pSS_046 | CDS | 42373 | 273 | + | 0.498168 |
NA | SSO_P199 | hypothetical protein | pSS_046 | CDS | 177395 | 264 | + | 0.583333 |
NA | SSO_P014 | IS91 ORF | pSS_046 | CDS | 12094 | 357 | - | 0.521008 |
NA | SSO_P083 | hypothetical protein | pSS_046 | CDS | 76173 | 201 | + | 0.38806 |
NA | SSO_P168 | hypothetical protein | pSS_046 | CDS | 148309 | 270 | + | 0.503704 |
NA | SSO_P062 | IS1294 ORF | pSS_046 | CDS | 59338 | 906 | + | 0.571744 |
NA | SSO_P118 | hypothetical protein | pSS_046 | CDS | 108668 | 234 | + | 0.316239 |
finO | SSO_P197 | FinO | pSS_046 | CDS | 176701 | 561 | + | 0.565062 |
hmo | SSO_P201 | putative regulator | pSS_046 | CDS | 178354 | 210 | + | 0.366667 |
icsB | SSO_P094 | IcsB | pSS_046 | CDS | 87785 | 1485 | - | 0.340067 |
ipaA | SSO_P087 | IpaA | pSS_046 | CDS | 80398 | 1902 | - | 0.353312 |
ipaC | SSO_P089 | IpaC | pSS_046 | CDS | 83357 | 1092 | - | 0.389194 |
ipaJ | SSO_P084 | IpaJ | pSS_046 | CDS | 77287 | 780 | + | 0.378205 |
ipgA | SSO_P093 | IpgA | pSS_046 | CDS | 87383 | 390 | - | 0.302564 |
ipgB1 | SSO_P092 | IpgB1 | pSS_046 | CDS | 86741 | 627 | - | 0.334928 |
ipgB2 | SSO_P024 | IpgB2 | pSS_046 | CDS | 18740 | 567 | + | 0.329806 |
ipgD | SSO_P095 | IpgD | pSS_046 | CDS | 89583 | 1617 | + | 0.354978 |
ipgE | SSO_P096 | IpgE | pSS_046 | CDS | 91209 | 363 | + | 0.349862 |
mkaD | SSO_P009 | mouse killing factor | pSS_046 | CDS | 7632 | 720 | - | 0.379167 |
mob9 | SSO_P171 | plasmid mobilization protein | pSS_046 | CDS | 149488 | 180 | - | 0.472222 |
mxiH | SSO_P099 | MxiH | pSS_046 | CDS | 93161 | 252 | + | 0.34127 |
mxiI | SSO_P100 | MxiI | pSS_046 | CDS | 93425 | 294 | + | 0.35034 |
mxiK | SSO_P102 | MxiK | pSS_046 | CDS | 94446 | 528 | + | 0.339015 |
mxiL | SSO_P104 | MxiL | pSS_046 | CDS | 95603 | 408 | + | 0.303922 |
mxiM | SSO_P105 | MxiM | pSS_046 | CDS | 95994 | 429 | + | 0.296037 |
mxiN | SSO_P103 | MxiN | pSS_046 | CDS | 94915 | 696 | + | 0.318966 |
ospC1 | SSO_P049 | OspC1 | pSS_046 | CDS | 44739 | 1413 | + | 0.319887 |
ospC2 | SSO_P065 | OspC2 | pSS_046 | CDS | 61538 | 1455 | - | 0.323711 |
ospC3 | SSO_P072 | OspC3 | pSS_046 | CDS | 67363 | 1455 | + | 0.310653 |
ospD2 | SSO_P008 | OspD2 | pSS_046 | CDS | 5491 | 1710 | - | 0.331579 |
ospD3 | SSO_P050 | OspD3 | pSS_046 | CDS | 46480 | 1698 | + | 0.35689 |
ospE2 | SSO_P213 | truncated OspE2 | pSS_046 | CDS | 187467 | 168 | - | 0.333333 |
ospE2 | SSO_P044 | OspE2 | pSS_046 | CDS | 40541 | 267 | + | 0.337079 |
repA | SSO_P205 | RepA | pSS_046 | CDS | 180760 | 858 | + | 0.586247 |
repB | SSO_P204 | RepB | pSS_046 | CDS | 180209 | 261 | + | 0.417625 |
spa15 | SSO_P110 | Spa15 | pSS_046 | CDS | 102043 | 402 | + | 0.330846 |
virA | SSO_P142 | VirA | pSS_046 | CDS | 124335 | 1203 | - | 0.351621 |
wbgV | SSO_P229 | putative glycosyltransferase | pSS_046 | CDS | 200756 | 1245 | + | 0.298795 |
yacB | SSO_P169 | hypothetical protein | pSS_046 | CDS | 148652 | 150 | + | 0.52 |
yigA | SSO_P198 | hypothetical protein | pSS_046 | CDS | 177391 | 213 | + | 0.615023 |