Gene list
Applied filters:
COG category: Cell motility
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 114
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SPA2448 | probable secreted protein | SubName: Full=Probable secreted protein; | chromosome | CDS | 2545075 | 408 | + | 0.470588 |
NA | SPA2573 | putative regulatory protein | SubName: Full=Putative regulatory protein; | chromosome | CDS | 2676448 | 426 | - | 0.619718 |
NA | SPA0549 | putative receptor/regulator protein | SubName: Full=Putative receptor/regulator protein; | chromosome | CDS | 623644 | 1005 | - | 0.517413 |
NA | SPA3020 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3123146 | 1644 | - | 0.572993 |
NA | SPA0083 | probable secreted protein | SubName: Full=Probable secreted protein; | chromosome | CDS | 94519 | 291 | - | 0.463918 |
NA | SPA3006 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3109444 | 1056 | - | 0.429924 |
NA | SPA2581 | putative capsid protein | SubName: Full=Putative capsid protein; | chromosome | CDS | 2680460 | 834 | - | 0.586331 |
NA | SPA2482 | hypothetical protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 2585994 | 1305 | - | 0.594636 |
NA | SPA1455 | putative pathogenicity island effector effector protein | SubName: Full=Putative pathogenicity island effector effector protein; | chromosome | CDS | 1527774 | 591 | - | 0.431472 |
bcfA | SPA0021 | fimbrial subunit | SubName: Full=Fimbrial subunit; | chromosome | CDS | 24462 | 543 | + | 0.521179 |
bcfB | SPA0022 | fimbrial chaperone | SubName: Full=Fimbrial chaperone; | chromosome | CDS | 25105 | 687 | + | 0.510917 |
bcfC | SPA0023 | fimbrial usher | SubName: Full=Fimbrial usher; | chromosome | CDS | 25796 | 2622 | + | 0.541571 |
bcfD | SPA0024 | fimbrial subunit | SubName: Full=Fimbrial subunit; | chromosome | CDS | 28418 | 1008 | + | 0.503968 |
bcfE | SPA0025 | fimbrial subunit | SubName: Full=Fimbrial subunit; | chromosome | CDS | 29426 | 546 | + | 0.47619 |
bcfG | SPA0027 | fimbrial chaperone | SubName: Full=Fimbrial chaperone; | chromosome | CDS | 30498 | 705 | + | 0.541844 |
cheA | SPA0947 | chemotaxis protein CheA | SubName: Full=Chemotaxis protein CheA; | chromosome | CDS | 1018172 | 2016 | + | 0.551587 |
cheB | SPA0951 | chemotaxis-specific methylesterase | RecName: Full=Chemotaxis response regulator protein-glutamate methylesterase; EC=3.1.1.61; | chromosome | CDS | 1023336 | 1050 | + | 0.55619 |
cheM | SPA3084 | methyl-accepting chemotaxis protein II | SubName: Full=Methyl-accepting chemotaxis protein II; | chromosome | CDS | 3191260 | 1566 | - | 0.502554 |
cheR | SPA0950 | chemotaxis protein methyltransferase | RecName: Full=Chemotaxis protein methyltransferase; EC=2.1.1.80; | chromosome | CDS | 1022473 | 867 | + | 0.527105 |
cheW | SPA0948 | purine binding chemotaxis protein | SubName: Full=Purine binding chemotaxis protein; | chromosome | CDS | 1020208 | 504 | + | 0.531746 |
cheZ | SPA0953 | chemotaxis protein CheZ | RecName: Full=Protein phosphatase CheZ; EC=3.1.3.-; AltName: Full=Chemotaxis protein CheZ; | chromosome | CDS | 1024803 | 645 | + | 0.570543 |
cpxP | SPA3903 | extracytoplasmic stress protein for protein-mediated toxicities | SubName: Full=Extracytoplasmic stress protein for protein-mediated toxicities; | chromosome | CDS | 4048631 | 501 | + | 0.506986 |
csgA | SPA1707 | major curlin subunit precursor | SubName: Full=Major curlin subunit; | chromosome | CDS | 1766791 | 456 | - | 0.510965 |
fimA | SPA2182 | type-1 fimbrial protein, a chain precursor | SubName: Full=Type-1 fimbrial protein, a chain; | chromosome | CDS | 2269893 | 558 | - | 0.544803 |
fimC | SPA2180 | fimbrial chaperone protein | SubName: Full=Fimbrial chaperone protein; | chromosome | CDS | 2268549 | 693 | - | 0.503608 |
fimD | SPA2179 | outer membrane usher protein FimD precursor | SubName: Full=Outer membrane usher protein FimD; | chromosome | CDS | 2265906 | 2613 | - | 0.553387 |
fimF | SPA2177 | fimbria-like protein FimF precursor | SubName: Full=Fimbria-like protein FimF; | chromosome | CDS | 2264356 | 519 | - | 0.55106 |
fimH | SPA2178 | FimH protein precursor | SubName: Full=FimH protein; | chromosome | CDS | 2264884 | 1008 | - | 0.519841 |
fimI | SPA2181 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2269285 | 534 | - | 0.546816 |
flgA | SPA1678 | flagellar basal body P-ring biosynthesis protein | SubName: Full=Flagellar basal body P-ring protein FlgA; | chromosome | CDS | 1740785 | 660 | + | 0.578788 |
flgB | SPA1677 | flagellar basal body rod protein | RecName: Full=Flagellar basal body rod protein FlgB; | chromosome | CDS | 1740212 | 417 | - | 0.52518 |
flgC | SPA1676 | flagellar basal body rod protein | SubName: Full=Putative flagellar basal-body rod protein FlgC (Proximal rod protein); | chromosome | CDS | 1739804 | 405 | - | 0.555556 |
flgD | SPA1675 | flagellar basal body rod modification protein | SubName: Full=Flagellar hook formation protein FlgD; | chromosome | CDS | 1739094 | 699 | - | 0.546495 |
flgE | SPA1674 | flagellar hook protein | SubName: Full=Flagellar hook protein FlgE; | chromosome | CDS | 1737856 | 1212 | - | 0.55363 |
flgF | SPA1673 | putative flagellar basal-body rod protein FlgF (proximal rod protein) | SubName: Full=Putative flagellar basal-body rod protein FlgF (Proximal rod protein); | chromosome | CDS | 1737080 | 756 | - | 0.608466 |
flgG | SPA1672 | flagellar basal-body rod protein FlgG (distal rod protein) | SubName: Full=Flagellar basal-body rod protein FlgG (Distal rod protein); | chromosome | CDS | 1736284 | 783 | - | 0.56705 |
flgH | SPA1671 | flagellar L-ring protein precursor | RecName: Full=Flagellar L-ring protein; AltName: Full=Basal body L-ring protein; Flags: Precursor; | chromosome | CDS | 1735531 | 699 | - | 0.543634 |
flgI | SPA1670 | flagellar P-ring protein precursor | RecName: Full=Flagellar P-ring protein; AltName: Full=Basal body P-ring protein; Flags: Precursor; | chromosome | CDS | 1734422 | 1098 | - | 0.578324 |
flgJ | SPA1669 | flagellar biosynthesis protein | SubName: Full=Flagellar protein FlgJ; | chromosome | CDS | 1733472 | 951 | - | 0.564669 |
flgK | SPA1668 | flagellar hook-associated protein | SubName: Full=Flagellar hook-associated protein 1; | chromosome | CDS | 1731746 | 1662 | - | 0.516245 |
flgL | SPA1667 | flagellar hook-associated protein | SubName: Full=Flagellar hook-associated protein 3; | chromosome | CDS | 1730778 | 954 | - | 0.536688 |
flgM | SPA1679 | negative regulator of flagellin synthesis (anti-sigma factor) | SubName: Full=Negative regulator of flagellin synthesis (Anti-sigma factor); | chromosome | CDS | 1741536 | 294 | + | 0.517007 |
flgN | SPA1680 | flagella synthesis protein FlgN | SubName: Full=Flagella synthesis protein FlgN; | chromosome | CDS | 1741834 | 423 | + | 0.541371 |
flhA | SPA0955 | flagellar biosynthesis protein | SubName: Full=Flagellar biosynthesis protein FlhA; | chromosome | CDS | 1026785 | 2079 | + | 0.563252 |
flhB | SPA0954 | flagellar biosynthesis protein | SubName: Full=Flagellar biosynthetic protein FlhB; | chromosome | CDS | 1025641 | 1152 | + | 0.557292 |
fliC | SPA0911 | flagellar biosynthesis protein | RecName: Full=Flagellin; AltName: Full=Phase 1-A flagellin; | chromosome | CDS | 989787 | 1488 | + | 0.498656 |
fliD | SPA0910 | flagellar hook-associated protein | SubName: Full=Flagellar hook associated protein 2; | chromosome | CDS | 988127 | 1404 | - | 0.495726 |
fliE | SPA0902 | flagellar basal body protein | RecName: Full=Flagellar hook-basal body complex protein FliE; | chromosome | CDS | 982632 | 315 | + | 0.568254 |
fliF | SPA0901 | flagellar M-ring protein | RecName: Full=Flagellar M-ring protein; | chromosome | CDS | 980724 | 1692 | - | 0.571513 |
fliG | SPA0900 | flagellar motor protein | RecName: Full=Flagellar motor switch protein FliG; | chromosome | CDS | 979736 | 996 | - | 0.549197 |
fliH | SPA0899 | flagellar assembly protein | SubName: Full=Flagellar assembly protein FliH; | chromosome | CDS | 979036 | 708 | - | 0.608757 |
fliI | SPA0898 | flagellum-specific ATP synthase | SubName: Full=Flagellum-specific ATP synthase; | chromosome | CDS | 977666 | 1371 | - | 0.600292 |
fliJ | SPA0897 | flagellar protein | SubName: Full=Flagellar FliJ protein; | chromosome | CDS | 977201 | 444 | - | 0.513514 |
fliK | SPA0896 | flagellar hook-length control protein | SubName: Full=Flagellar hook-length control protein; | chromosome | CDS | 975981 | 1224 | - | 0.611928 |
fliL | SPA0895 | flagellar biosynthesis protein | SubName: Full=FliL protein; | chromosome | CDS | 975409 | 468 | - | 0.547009 |
fliM | SPA0894 | flagellar motor switch protein | RecName: Full=Flagellar motor switch protein FliM; | chromosome | CDS | 974400 | 1005 | - | 0.534328 |
fliN | SPA0893 | flagellar motor switch protein | SubName: Full=Flagellar motor switch protein FliN; | chromosome | CDS | 973990 | 414 | - | 0.543478 |
fliO | SPA0892 | flagellar protein FliO | SubName: Full=Flagellar protein FliO; | chromosome | CDS | 973613 | 378 | - | 0.608466 |
fliP | SPA0891 | flagellar biosynthesis protein | SubName: Full=Flagellar biosynthetic protein FliP; | chromosome | CDS | 972876 | 738 | - | 0.53794 |
fliQ | SPA0890 | flagellar biosynthesis protein | SubName: Full=Flagellar biosynthetic protein FliQ; | chromosome | CDS | 972597 | 270 | - | 0.518519 |
fliR | SPA0889 | flagellar biosynthesis protein | RecName: Full=Flagellar biosynthetic protein fliR; | chromosome | CDS | 971794 | 795 | - | 0.513208 |
fliS | SPA0909 | flagellar protein FliS | SubName: Full=Flagellar protein FliS; | chromosome | CDS | 987705 | 408 | - | 0.5 |
fljB | SPA2627 | flagellar biosynthesis protein | SubName: Full=Flagellar synthesis: phase 2 flagellin (Filament structural protein); | chromosome | CDS | 2729053 | 1521 | - | 0.504931 |
hofB | SPA0147 | protein transport protein HofB | SubName: Full=Protein transport protein HofB; | chromosome | CDS | 169549 | 1386 | - | 0.55267 |
hofC | SPA0146 | protein transport protein HofC | SubName: Full=Protein transport protein HofC; | chromosome | CDS | 168357 | 1203 | - | 0.54281 |
hopD | SPA3308 | Type III leader peptidase | SubName: Full=Type III leader peptidase; | chromosome | CDS | 3403297 | 468 | + | 0.525641 |
invG | SPA2756 | secretory protein (associated with virulence) | SubName: Full=Secretory protein (Associated with virulence); | chromosome | CDS | 2856133 | 1689 | - | 0.462996 |
motA | SPA0945 | flagellar motor protein | SubName: Full=Motility protein A; | chromosome | CDS | 1016354 | 888 | + | 0.511261 |
motB | SPA0946 | flagellar motor protein | SubName: Full=Motility protein B; | chromosome | CDS | 1017238 | 930 | + | 0.544086 |
orgB | SPA2727 | oxygen-regulated invasion protein | SubName: Full=Oxygen-regulated invasion protein; | chromosome | CDS | 2828343 | 672 | - | 0.446429 |
pilT | SPA2962 | Type II secretion, ATP-binding, protein | SubName: Full=Type II secretion, ATP-binding, protein; | chromosome | CDS | 3069305 | 981 | - | 0.579001 |
ppdA | SPA2865 | prepilin peptidase dependent protein A precursor | SubName: Full=Prepilin peptidase dependent protein A; | chromosome | CDS | 2974994 | 471 | - | 0.55414 |
ppdD | SPA0148 | prepilin peptidase dependent protein D precursor | SubName: Full=Prepilin peptidase dependent protein D; | chromosome | CDS | 170944 | 438 | - | 0.541096 |
safB | SPA2463 | periplasmic fimbrial chaperone protein | SubName: Full=Periplasmic fimbrial chaperone protein; | chromosome | CDS | 2562231 | 741 | - | 0.476383 |
safC | SPA2462 | outer-membrane fimbrial usher protein | SubName: Full=Outer-membrane fimbrial usher protein; | chromosome | CDS | 2559697 | 2511 | - | 0.544006 |
sefB | SPA4305 | fimbrial chaperone protein | SubName: Full=Fimbrial chaperone protein; | chromosome | CDS | 4473323 | 753 | + | 0.288181 |
sefC | SPA4306 | outer membrane fimbrial usher protein | SubName: Full=Outer membrane fimbrial usher protein; | chromosome | CDS | 4474080 | 2445 | + | 0.353783 |
sipB | SPA2743 | pathogenicity island 1 effector protein | SubName: Full=Pathogenicity island 1 effector protein; | chromosome | CDS | 2843650 | 1782 | - | 0.523569 |
spaI | SPA2752 | type III secretion system ATPase | SubName: Full=Virulence-associated secretory apparatus ATP synthase; | chromosome | CDS | 2851213 | 1296 | - | 0.543981 |
spaO | SPA2749 | type III secretion protein | SubName: Full=Surface presentation of antigens protein (Associated with type III secretion and virulence); | chromosome | CDS | 2848871 | 912 | - | 0.526316 |
spaS | SPA2745 | type III secretion protein | SubName: Full=Secretory protein (Associated with virulence); | chromosome | CDS | 2846069 | 1071 | - | 0.430439 |
spiA | SPA1459 | putative outer membrane secretory protein | SubName: Full=Putative outer membrane secretory protein; | chromosome | CDS | 1530402 | 1494 | - | 0.423025 |
spy | SPA1536 | hypothetical protein | SubName: Full=Putative exported protein; | chromosome | CDS | 1609798 | 486 | - | 0.5 |
ssaN | SPA1438 | type III secretion system ATPase | SubName: Full=Putative type III secretion ATP synthase; | chromosome | CDS | 1515306 | 1302 | - | 0.512289 |
ssaQ | SPA1435 | type III secretion protein | SubName: Full=Putative type III secretion protein; | chromosome | CDS | 1513622 | 969 | - | 0.459236 |
stbA | SPA2379 | probable fimbrial protein | SubName: Full=Probable fimbrial protein; | chromosome | CDS | 2479819 | 537 | + | 0.476723 |
stbB | SPA2380 | fimbrial chaperone protein | SubName: Full=Fimbrial chaperone protein; | chromosome | CDS | 2480417 | 762 | + | 0.450131 |
stbC | SPA2381 | outer membrane fimbrial usher protein | SubName: Full=Outer membrane fimbrial usher protein; | chromosome | CDS | 2481162 | 2562 | + | 0.539422 |
stbE | SPA2383 | fimbrial chaperone protein | SubName: Full=Fimbrial chaperone protein; | chromosome | CDS | 2485019 | 759 | + | 0.472991 |
stcA | SPA0700 | putative fimbrial subunit protein | SubName: Full=Putative fimbrial subunit protein; | chromosome | CDS | 783645 | 534 | + | 0.395131 |
stcB | SPA0701 | putative fimbrial chaperone protein | SubName: Full=Putative fimbrial chaperone protein; | chromosome | CDS | 784240 | 681 | + | 0.396476 |
stcC | SPA0702 | putative outer membrane usher protein | SubName: Full=Putative outer membrane usher protein; | chromosome | CDS | 784949 | 2487 | + | 0.468034 |
stdA | SPA2897 | probable fimbrial protein | SubName: Full=Probable fimbrial protein; | chromosome | CDS | 3008709 | 585 | - | 0.526496 |
stdB | SPA2896 | probable outer membrane fimbrial usher protein | SubName: Full=Probable outer membrane fimbrial usher protein; | chromosome | CDS | 3006100 | 2490 | - | 0.609237 |
stdC | SPA2895 | probable fimbrial chaperone protein | SubName: Full=Probable fimbrial chaperone protein; | chromosome | CDS | 3005316 | 744 | - | 0.587366 |
steB | SPA2813 | outer membrane usher protein | SubName: Full=Outer membrane usher protein; | chromosome | CDS | 2913144 | 2646 | + | 0.558201 |
steC | SPA2814 | periplasmic fimbrial chaperone | SubName: Full=Periplasmic fimbrial chaperone; | chromosome | CDS | 2915802 | 774 | + | 0.54522 |
steF | SPA2817 | fimbrial subunit | SubName: Full=Fimbrial subunit; | chromosome | CDS | 2917583 | 537 | + | 0.480447 |
stfA | SPA0201 | putative fimbrial subunit | SubName: Full=Putative fimbrial subunit; | chromosome | CDS | 234923 | 561 | + | 0.518717 |
stfD | SPA0203 | putative periplasmic fimbrial chaperone | SubName: Full=Putative periplasmic fimbrial chaperone; | chromosome | CDS | 238244 | 753 | + | 0.535193 |
sthA | SPA4405 | putative fimbrial protein | SubName: Full=Putative fimbrial protein; | chromosome | CDS | 4580651 | 546 | - | 0.501832 |
sthB | SPA4404 | putative fimbrial chaperone protein | SubName: Full=Putative fimbrial chaperone protein; | chromosome | CDS | 4579897 | 684 | - | 0.459064 |
sthC | SPA4403 | putative fimbrial usher protein | SubName: Full=Putative fimbrial usher protein; | chromosome | CDS | 4577314 | 2538 | - | 0.471237 |
sthD | SPA4402 | putative fimbrial subunit | SubName: Full=Putative fimbrial subunit; | chromosome | CDS | 4576739 | 558 | - | 0.5 |
sthE | SPA4401 | putative major fimbrial subunit | SubName: Full=Putative major fimbrial subunit; | chromosome | CDS | 4575613 | 1086 | - | 0.518416 |
stkA | SPA0185 | major fimbrial subunit | SubName: Full=Major fimbrial subunit; | chromosome | CDS | 214375 | 606 | - | 0.463696 |
stkB | SPA0184 | putative fimbriae; chaparone | SubName: Full=Putative fimbriae chaparone; | chromosome | CDS | 213536 | 753 | - | 0.463479 |
stkC | SPA0183 | outer membrane usher protein | SubName: Full=Outer membrane usher protein; | chromosome | CDS | 210871 | 2598 | - | 0.515396 |
stkG | SPA0179 | putative fimbrial protein | SubName: Full=Putative fimbrial protein; | chromosome | CDS | 207989 | 1062 | - | 0.503766 |
tcfC | SPA2453 | outermembrane fimbrial usher protein | SubName: Full=Outermembrane fimbrial usher protein; | chromosome | CDS | 2549942 | 2688 | - | 0.53683 |
tcp | SPA3428 | methyl-accepting chemotaxis citrate transducer | SubName: Full=Methyl-accepting chemotaxis citrate transducer; | chromosome | CDS | 3535668 | 1644 | + | 0.555353 |
tsr | SPA4354 | methyl-accepting chemotaxis protein I, serine sensor receptor | SubName: Full=Methyl-accepting chemotaxis protein I, serine sensor receptor; | chromosome | CDS | 4530442 | 1662 | + | 0.546931 |
yifL | SPA3787 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 3930237 | 204 | + | 0.534314 |
yrfC | SPA3356 | hypothetical protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 3450925 | 540 | - | 0.587037 |