Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 353
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# Escherichia coli O157:H7 EDL933, EDL933 >Z2365 putative DNA packaging protein of prophage CP-933R; terminase small subunit MATQTEVARHLSLTDRQLRRLQKLPGAPISNKRGQLDLDAWRDFYISYLR RSKNDVPDGDSEDDYEEKLLIARWELTAEQAVTQQLKNEVSKGKLIDTGF CIFALSKLAMALSSTLDSIPLSMQRQFPDLTPRHLDHLKTLIAKGANQCA RAGDKLPDLLDEYIRATTE >Z0394 hypothetical protein MLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVWKKK PR >Z2084 putative integrase within CP-933O; partial MIHLIKPAIDALRSQMALTRLSKEHIIDVHLREFGRTEKQKCTFVFQPEV SAKVKNYGDHFTVDSIRQMWDAAVKRAGIRHRKSYQSRHTYACWSLTAGA NPAFIANQMGHADAQMVFQVYGKWMSENNNAQVTLLNTQLSEFAPTMPHN EAMKS >Z0367 unknown protein encoded in ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z3115 putative endonuclease encoded within prophage CP-933U MLIDLVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSL SGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVR GQLVPGERLGIKITELECA >Z5088 unknown protein encoded by IS911 within prophage CP-933L MISSPQHKTGDLMNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVG STTLESWVRQLRRERQGIAPSATPITPDQQRIRELEKQVRRLEEHNTILK KATTALLMSDSLNGSR >Z3664 putative virulence protein MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALALQNENHEAGNKYI PYGKMASWLVEWKNATETQWLKDAPSQPLQQSLKELERAYKNFFRKRAAF PRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYLNSRQVTGVVKNV TVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEP VNSFQKNQKKLARLQRQLSRKVKFSNNWQKQKRKIQRLHSCTANIRRDYL HKVTTTVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSIL DQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRCACCGHTAKENRLSQSK FRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRSLKQEPTEMIQA TA >Z0857 putative receptor MEHKLSDILLLIICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVH DTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSR RRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAPPELLNILDIKGKIITT DAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPEHD SYAISEKSHGREEIRLHIVCEVPDELIDFTFEWKGLKKLCVAVSFRSIIA EQKKEPKMTVRYYISSADLTAGKFATAIRNHWHVENKLHWRLDVVMNEDD CKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASV LAGSGLS >Z1647 partial transposase MATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWY NNRRLLERLGHTPPAEAEKAYYASIGNDDLAA >Z2078 putative transposase within CP-933O MDEKQLQALANELAKNXKTPEDLSQFDRLLKKISVEAALNAEMSHHLGYD KNQPKPGANSRNGYSTKTVITGDGHLELRTPRDRDGSFEPZLVKKNQTRI TGMDNQILSLYAKGLTTREIAAAFKELYDADVVSVQRGPY >Z1648 unknown in putative ISEc8 MELQDWRKEXRKNYSNEFKLRMVELASQPGASVARIAREHDINDNLLFKW LRLWQNEGRISRRLQVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTS TQTSVSAGSCKVEFRHGNMTLENPSPELLTLLIRELTGRGR >Z4340 unknown protein encoded by ISEc8 MLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHR RPLPAHLPREIQRLESEESCCPECGGELDYLGEVSAEQLELVSSALKVIR TERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYR QSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNTRKLHTDDT PVKVLAPGLKKTKTGRIWTYVRDDRNAGSSSPPAVWFAYSPNRQGKHPEQ HLRPFRGILQADAFTGYDRLFSAEREGGALTEVACRAHARRKIHDVYISS KSATAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKALLTSLHEWMM EKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAETDNNTAERALRAVC LGKKNYVFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWP SNRVDELLPWNVVLTNK >Z5097 unknown protein encoded by ISEc8 within prophage CP-933L MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z1638 putative transposase MPLLDKLHEQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLR GKKXRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYI SLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRA EVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA >Z3945 hypothetical protein MGYKVKKFIMSSGERGCLILDKKSNLPTYYQNLFLTTDIRNRGATASTME IVATNLLIFSNFLDGRGIDIIERVELKKYLSVAEIDDLVRYAKQRFDRQK IINIKSTNYRFIAKRTFSYRIHVFSRYLKWLCGLVHSSKGIHAKYEVDVF IESIRAHIPRNSSLNMNEISEKSLNEEEIKVLFRLLEIGGIENPFHKEVQ VRNRLIFTLLLNLGLRAGELLNLKIDDFDLRDNTLSVVRRHDSKEDGRSY QPLVKTGERVIPLSDELAREIFDYISNSREKMTKRKKHNFLFVAHCTGKN AGEPLSISAYEKVISTLKRASPELYNLSGHRLRHSWNYMYSKRNRRC >Z2072 putative IS encoded proteinen coded by prophage CP-933O MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z5879 orf; hypothetical protein in IS MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z0324 integrase protein for prophage CP-933I MCIGLCICSCSVWIPIHMPLNDMQIRRAKPEAKAYTFGDGLGLSLLIEPN GSKSWRFRYRYAGKPKMISLGVYPTITLADARSRRDEARKLVAEGKNPSE VRKEQKLAMQTESENAFEKIAREWHQLKSAKWSAGYASDIMEAFKNDIFP YVGTRPVGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIATGR AEYNPAADLSSALEVHQSNHFPFLKADEIPDFLRALEGYSGSKLVQIATK LLMITGVRTIELRAALWQEFDLDNAIWEIPAERMKMRRPHLVPLSSQAVD LLNELKIMTGNYRYVFPGRNDPNRPMSEASINQAIKRIGYGGKVTGHGFR HTLSTILHEQGFESAWIEIQLAHVDKNSIRGTYNHAQYFSGRKSMMDWYS NLIFERLKRS >Z5114 hypothetical protein MNEKFRTDLAHTFGIALEEQTDVLSFHDNDGHEWILECASQSEILFFYCY LLNSESIQINSILEMNSNRELLGMFFLSLKDDNILLNIAFPADKIDITEF ANLMENGYLLKNEIIRSLSSRPTDFLP >Z2791 hypothetical protein MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQQQALV RELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQA LVWCSPEEALQYPLAPADIPLLEAFMALRAARPAD >Z6019 putative transposase fragment MATFFAYPADIRKVIYTTNAIESLNSVIRHAIRKRKVFPTDESVKKVVWL AIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF >Z3333 unknown protein encoded within prophage CP-933V MLTTQKRKFALALMSGKNKTASAXAAGYSAKTARVKGSQLAKDPEVLAFI ARKQCETVEVDEVPVYRQKKSEPEDKPRRREAAAIPQPDETNPEMPPPVV ISPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKG DAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG >Z2060 putative DNA adenine methyltransferase encoded by prophage CP-933O MLNTVKISSCELINADCLEFMRSLPENSVDLIVTDPPYFKVKPEGWDNQW AGDEDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDTEIMMRERFNVL NHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDAGYEAK GRTLKQHVMAPLIAYFRDARAVLGITAKQIADATGKKNMVSHWFSAGQWQ LPNESDYLKLQALFARVAEEKHQRGELEKPHHQLVDTYASLNRQYAELQS EYKHLRRYFGVTVQVPYTDVWTYKPVQYYPGKHPCEKPAEMLQQIISASS RPGDLVADFFMGSGSTVKAAMALGRRATGVELETERFEQTVREVQDLIIR NG >Z1561 hypothetical protein MVHNGAGVRDSSRTLKVDINTVILTLKNAHHVK >Z6014 unknown protein encoded in ISEc8 MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENG INANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETL SISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR >Z3622 putative resolvase MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERV ELMRLLSEAQSGDLLLVEAIDRLSRLEHSAWVELKDTLNRKGLIIVSMDL PTSWQMVEMAGNDLTSGILRAVNAMLIDILATMARQDYETRRKRQQQGIE RAKSEGIYIGRAKNQEAREIVREMLEQGVKPELIMKAAGISRATYYRIKN ELLIVKSE >Z1221 putative transposase MPLLDKLHEQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLR GKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYI SLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRA EVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA >Z2111 putative transposase encoded within prophage CP-933O MARCTVARLMAVMGLAGVLRGKKVRTTXSRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLNALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z1600 unknown in ISEc8 MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEK IEEEEREIEHLRAQIEKLRRMLFGTRSEKLQREVEQAEAQLKQREQESDR YSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGSELDY LGEVSAEQLELVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAG SGLLARVLTGKYCEHLPLYRQSEIFARQGIELSRALLSNWVDACCQLMTL LNDTLYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGRIWTYVRDDRNAGSS EPPAVWFAYSPDRQGKHPVQHLRPFRGILQADAFSGYDRLFSAEREGGAL TEVACWAHARRKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESER LAVRQQRSKVLLTSLHEWMVEKNGTLSKKSRLGEACSYVLNQWDALCYYS DDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRL NGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK >Z3156 unknown protein encoded by ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1150 unknown in IS MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARK GLGTPGSRTVAELESEILQLRKALNEARLERDILKKAAVDSICQCNTPFN YLFHCPRRYRLSV >Z5491 orf; hypothetical protein in IS (partial) MALICKLSQQWSFVGSKARQHWLWYVYNTKTGGVLAYTFGPRTDETCREL LALLTLLPSAC >Z2982 unknown protein of IS629 encoded within prophage CP-933T MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1562 unknown in IS1N MALICELDEQWSFVENKARQQWHWYAYKTKADGVLAYTFGPRTDETCREL PEFLKPFSAGMITRDNRSSYTREMPQDKHLVGKIFTRRIERNNLTLRTHI KRPARKTICFLRSLEIHEKPLVHLSKTHVLLTGVITRASFAVFLP >Z1338 DNA replication protein DnaC MKNIAAAGVLERIRRLAPQASVPPYRTVEEWREWQLAEGRKRSEEINRQN HQLRVEKILNRSGIQPLHSKCSFANYQVQNDGQKYALSQAKSIADELMTG CTNFVFSGKTGTGKNHLAAAMGNRLMAKGRSVIIVTVSDVMSVLHDSYDN GKSGEKFLQELCSVDLLVLDEIGVQRETKNEQVVLHQIIDRRTASLCSVG MLTNLNHAAMSTLLGERIMDRMTMNGGRWVTFNWDSWRPNVSNMRVVK >Z1020 putative ATP-dependent helicase MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHL AIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLL KKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQ EEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCY YYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEG HHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAI PERLNAHCEELYELIASLNNILNXYMPAGQEAEHRFAMGELPDEVLEICQ RLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQS KLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKI VIPRMRVEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRF LDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDL KGDMLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNL IQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEG IVKKKEKTKSPRRRRR >Z3162 IS629 transposase MMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSAHAQHDDW LKKEIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVL RGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVA FIIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQY VSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR TEVELATLTWVDRYNNRRLLERLGHIPPAEAEKAYYASIGNNDLAA >Z4802 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) MIQRGTLARESLALDALVLGEHSSRLAWLATVIPQFSKSGIVYTLTTRDA ELVAEWLRKNGISAFAYYSGVTCEGAEDSNTAREYLEQALLANKIKVLVA TTALGMGFDKPDLGFVIHYQMPGSIVGYY >Z1934 putative transposase for IS629 MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAXRPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z1344 putative endonuclease of cryptic prophage CP-933M MRIEFVLLYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSL SGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVR AQPVSGGRLGVKIYPIMLEGQVKK >Z2562 putative transposase (partial) MWRRAAPTLRIRAPPKDKKMATIHNALDECSTEHPVFYEDEVFIHLNPKI GADWKLLGKQKRGVTPEQNEKYSLDVALHSGTG >Z4335 unknown protein in IS629 MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z2430 putative transposase for IS629 MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z3154 unknown protein encoded by ISEc8 MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENG INANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETL SISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR >Z4200 hypothetical protein MMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLK SVALLIAYLDKANFYVMEDSGAWEEDARLNTSSVALVTSGLERLSNLLSK KDSVFVSDLLREAKVNELDETLSTTRLNHLIDKGYERITLQLDLGGESPG YLEKDKHYREADAALLNVIYPANLSKINTRRKEQVLKIVKKLAGPYGIKR YEKDNYQSANFWFNDIKTDTDQNSHAKREKSFIPSTEAEWFFDSWYAKSA AIVYKESRKEEYLNDSVQFMNRSLAQITGENMIGANGRSVPEMALPESYN YIHKSGTLHEAPSPIIPLNWSKASMTLMLKEMSNLINDEGIK >Z2110 putative transposase encoded within prophage CP-933O MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z3925 partial putative transposase MGWRVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTERLK EAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTW VDWYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA >Z1871 unknown protein encoded by prophage CP-933X MKKAIAYMRFSSPGQMSGDSLNRQRRLIAEWLKVNSDYYLDTITYEDLGL SAFKGKHAQSGAFSEFLDAIEHGYILPGTTLLVESLDRLSREKVGEAIER LKLILNHGIDVITLCDNTVYNIDSLNEPYSLIKAILIAQRANEESEIKSS RVKLSWKKKRQDALESGTIMTASCPRWLSLDDKRTAFVPDPDRVKTIELI FKLRMERRSLNAIAKYLNDHAVKNFSGKESAWGPSVIEKLLANKALIGIC VPSYRARGKGISEIAGYYPRVISDDLFYAVQEIRLAPFGISNSSKNPMLI NLLRTVMKCEACGNTMIVHAVSGSLHGYYVCPMRRLHRCDRPSIKRDLVD YNIINELLFNCSKIQPVENKKDANETLELKIIELQMKINNLIVALSVAPE VTAIAEKIRLLDKELRRALVSLKTLKSKGVNSFSDFYAIDLTSKNGRELC RTLAYKIFEKIIINTDNKTCDIYFMNGIVFKHYPLMKVISAQQAISALKY MVDGEVYF >Z4503 putative transposase MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z1825 insertion sequence 2 OrfB protein MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDT DVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNA LLLERKPTVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFAL DCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNG SCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTIKRDYISIMPK PDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE I >Z1475 putative terminase small subunit of bacteriophage BP-933W MAKLDWKKLEQAFRREHAETGITLLDWCRKKKINYNTARTRIKMGKIDHE IDHKTDHEIDHDISDEEPCNDAGSGDEKCAKNSEKNCANSAETKRIRGSR LLPPSNAFSQRNTHAVRHRGYAKYLEADNLMDDASDMVLFDELVFTRARA LSVTKALKGMFADLEEATDVETRVALYDKILKAEQALDRNIARIESIERS LLTLDVLAETAPKLRADRERINAARDKLRAETDILTNQRRGVVTPVSDIV SSLHEMSNSGRLDDIPEE >Z0271 hypothetical protein MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDF GETHLDFLRQYGDFENAIPVHDTIARVVSCISPAKFHECFINWMRDCHSS DDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSN EITAPPELLNILDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQG RLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCEVPDELIDF TFEWKGLKKLCVAVSFRSIIAEQKKEPKMTVRYYISSADLTAGKFATAIR NHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVF KAGLRRKMRKAAMDRNYLASVLAGSGLS >Z6046 putative terminase subunit encoded by cryptic prophage CP-933P MLTTQKRKFALALMSGKNKTASALAAGYSAKTARVKGSQLAKDPEVLAFI ARKQCETVEVDEVPVYRQKKSEPEDKPRRREAAAIPQPDETNPEMPPPVV ISPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKG DAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG >Z4313 putative pathogenicity island integrase MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKT LALVVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEH IARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVR AAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQH RPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSSELRYARWSEI DIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQVVAILAELQTW AGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSA LIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLD ANRERFISPFEYAKINNPLKQ >Z1957 transposase for IS629 MMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDW LKKEIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVL RGKKVRTTVSRKAVAACDRVNRQFVAERPDQLWVADFTWVSTWQGFVYVA FIIDVFAGYIVGWQVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQY VSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR TEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNNDLAA >Z1448 regulatory protein Cro of bacteriophage BP-933W MQNLDEPIKGVGIPEVAKACGVSERAVYKWLKNGFLPKTEFFGKTKYASK IEEISGGKYQASEMLEISKKNLLAA >Z2092 unknown protein encoded within prophage CP-933O MKIKHEHIRMAMNAWARPDGEKVPAAGITQAYFELGMTFPELYDDSHPEA LARNTQKIFRWIEKDTPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYY REIVERRDRLVKDVDDFVAAAIAWGTLTNSGGQPGNAVVVH >Z5098 unknown protein encoded by ISEc8 within prophage CP-933L MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1602 unknown in ISEc8 MFSGLFAMLTPDNVFLVVKPVDMRRGIDTLTQYVQNELNAAWHDGAAFVF TNKVRSRIKVLRWDKHGVWLCTRRLHRGSFRWPRKGDATWHLTQDEFHWL VFGVDWQQVKGHDLAKWVYQ >Z1357 unknown protein encoded by cryptic prophage CP-933M MLTTQKRKFALALMSGKNKTASALAAGYSAKTARVKGSQLAKDPEVLAFI ARKQCZTVEVDEVPVYRQKKSEPEDKPRRREAAAIPQPDETNPEMPPPVV ISPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKG DAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG >Z3924 partial putative transposase MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVXXRPDQ LWVADFTYVSTWQGFVYVAFIN >Z5902 putative helicase MTVQTPKVALSDGFLGAFARIPKAQQKKVQEFISKFRQDPTSNGLNYEKI HDARSKNVHSVRIDQTYRGIVLKPEQGALYMLMWVDKHDEAYDWARRHDC SIHPVTGAIQVIDISYIKPAAETVVDKPKLFAAYSAEQILALGVPPVFID QVMALTDEAGLNQLESIMPAEAWEPLHWLAEGLDYQEVLEEFNDHRDEPV DTNDFMEAIERSKRRFHVVENEQELLQMLNAPLEKWRVFLHPSQRKLVES PANGPVRVLGGAGTGKTVVAMHRARWLSQRLADKPGKKVLFTTFTRNLAA DIRANLQRLCTREEMARIDVVNIDAWMSDQLKRHGYDFRVVYDSDEGRRK CWNYALQQAPAELGLPDNFYAEEWQRVVQPNAVYTREEYLKVSRVGRGTA LSRIQRAKIWPVFEEFRAQMARAKLREMGDAMHEAIVLFKEKQVQLPYSS IVVDEAQDIGAPAFTLIRSLVPESPXDLFIVGDGHQRIYRNKVVLGQCGI NVRGRRSKKLKINYRTTEETRQFAVGLLTGVKVDNXDGEADTSNDYLSLL HGEKPMITHAADFKEEAATXVKQIQALLANQVRSQDICITARTKHXCDRY ASALNDAGIETFNLGNDSGDSDARPGVRVATMHRIKGLEFQYVFLVGINE GVVPEIKALASDDPVEQRDALFNERALLHVAATRAVKGLFVSSSGVPSPL LVAD >Z4337 unknown protein encoded by ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1132 unknown protein encoded in ISEc8 MIPLPFGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z4330 putative transposase MQKAIYKTHDKNYARRLTAMLMLHRSARVSDVARTLCCARSSVRRWINWF TLSSVEGLKSLPAGRSRRWPFEHICTLFRELIKHSPGYFGYQRSRWSTEL LAIKINEITECQLHAGTVRRWLPLVGLVWRRAAPTLRTRNPHKAAIHKAL DECSAEHPVFYEDEVYIYLNPKTGADWQLRRQQKHVVTPGQNEKYYLAGA LHSGTGKVSYVGGNSKSSALFISLLKHLKLTYRRDKPITLIVDNYIIHKS RETQRWLKENPKFRVIYQPVYSPWVNHVERL >Z2561 putative transposase (partial) MSIIPPISRDERRLIQKAIHKRLTAMLMLHRGDRVSDVARTLCCARSSVG RWIN >Z4316 unknown protein encoded by ISEc8 MITLPTGTRIWIIAGITDMRCGFNGLASKVQNTLKDAPFSGHIFVFRGRS GKMVKILWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGI AWQHPKRTERPGIRI >Z6021 hypothetical protein MLSPSSINLGCSWNSLTRNLTSPDNRVLSSVRDAAVHSDSGTQVTVGNRT YRVVVTDNKFCVTRESHSGCFTNLLHRLGWPKGEISRKIEAMLNTSPVST TIERGSVHSNRPDLPPVDYAQPELPPADYTQSELPRVSNNKSPVPGNVIG KGGNAVVYEDMEDTTKVLKMFTISQSHEEVTSEVRCFNQYYGSGSAEKIY NDNGNVIGIRMNKINGESLLDIPSLPAQAEQAIYDMFDRLEKKGILFVDT TETNVLYDRMRNEFNPIDISSYNVSDISWSEHQVMQSYHGGKLDLISVVL SKI >Z3095 putative transposase encoded within prophage CP-933U MSSTGSDRYAXNCILPRQRITIVSNSDIIPDKRSARAQHDDWLKREIQRV YDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTT ISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAG YIVGWRVSSSMETTFVLXALEQALWARRPSGTIHHSDKGSQYVSLAYTER LKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELATL TWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNDDLAA >Z1601 unknown in ISEc8 MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQ RFGKKCESLAGMQRSLFEEDVDADIAEISAHLDKLLPQTGDEEKTTTRPV RKPLPSPLPRAEKVIPPAEERCPDCDAPLHFIRDEVSEKLEYIPAQVVVN RYIRPQYSCPCCEKVFSGKMPAHILPKSAVEPSVIAQVVISKYTDHLPLY RQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHELLTRDVIHADE TSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY >Z4803 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) MEKHAAELLLQRMLGNTTATFREGQWEAIDAVVNQRRKLLVVQRTGWGKS AVYFIASKIFRDRGAGPTIIISPLLALMRNQVAAAERLGITAETLNSTNR EEWQRISDKLLQGEVDCLLVSPERLANQDFIETVLYPIADHIGLLVVDEA HCISDWGHDFRPDYRRILDILRNYLRIPLFWVQPRQRITVSLRISVSNWV TL >Z6022 putative integrase fragment MAAMLNTYVAEGKAVSARVIRSTLVDVFRGAIAEGHVATNPVTTTRAAKS EVRRSRLTANEYVAIYHAAEHLPIWLRLSMDLAVVTGQRVGDLCRMKWSD INDGHLHIGQSKTGAKIAIPLALTIDALDISLVDTLQKCREASSSETIIA STYHEPLSPATVSRYLTKARNASGISFDGDPPTFHELRSLSARLYRNQIG YKFAQRLLGHKSDSMAAHYRDSRGREWDKIEIG >Z4314 unknown protein encoded by ISEc8 MARGKAAITFFREPPATSCDSRCSCRTARIARRGPGNPQYQLLSTTDDYC TVRDSVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALTE EALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKTL SRHLELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKNF LFFGSDHGGERGALLYSLIGMCKLNDVDPESYXRHVLGVIADWPVNRVSE LLPWRIALPAE >Z0366 unknown protein encoded in ISEc8 MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z1444 putative serine/threonine kinase encoded by bacteriophage BP-933W MLTPYKRADVEFEWISDLEEQGCFSKVYLAHDRHLAHDLVIKEIEKKENT NHDDYFNEARLLYKHAHPNIVQVQYAAQCESNIYIAMPFYHNGSLNQLMK KNNLTSREIIRYSIQFLSGLYHIHSKGLMHFDIKPNNIMISNRNEAMLSD FGLSQLVNEESRAAPEFGYHFHVPPEYFSLSTNDYNFTYDIYQAGLTIYR MCVGHDNFERERSAFSTIEQLRESIINGCYPLKEYPPHIHKKLITIVNKC IHVDPNERYQSVLDVLNDLSAISDGVLDWRLQMTKPTNGTCEWQKKSGDA ILSIVFDAENSSTTGFRLYDDGRKRRATNLTISSGCTPTKLYRLLKDN >Z4064 hypothetical protein MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVA CIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLL YQAKLALTEDLRLKVVRKMYELRFREPPPARRSVDQLRGIEGSRVRQTYA LLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGY APAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLA CRDIFRSTKLTGKLIPLIEKVLAAGEIEPPQPAPDMLPPAIPEPETLGDS GHRGRGG >Z4799 putative DNA processing protein MDADSSNSTVTPGRLPDGLSSCPCFYLGKKLMNLSANAQATLLLTSDFSR AAASKYKPLSNSEWGKFALWLKHQRISPAELLVPQPQEKLTGWSDPRISQ ERILGLLARGHSLALAVDKWQRAGLWILTRGDADYPVRLKNRLRTDAPPV LFGCGNKALLQAEGMAIVGSRDAPTDDLRYTQQLAAKLAQQGICVISGGA RGIDECAMASALEAGGTAVGVLADSLLKTSTLVKWREGLIAGNLVLISPF YPEVRFTVGNAMARNKYIYCLAESAMVVRAGMTGGTITGAMEALKHQWLP VQVKPNQDMQSANSRLVENGASWSAEQAENVTIRLPDVPGLMYDRALRNA QPELFSLHEDDANYAVMPAYTPVDFYQLFVAELAILAKESISIERLASCT GLTIEQISVWLNRAEEEGRVIRLGEGHYQFR >Z2081 putative IS encoded protein within CP-933O MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z2130 putative IS encoded protein encoded within prophage CP-933O MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1882 putative DNA packaging protein of prophage CP-933X MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAAIKWY AERDAEIENEKLRREVEELRQDSETDLQPGTIEYERHRLTRAQADAQELK NARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDF LKRDIIKAMNKAAALDELIPGLLSEYIEQSG >Z4317 unknown protein encoded by ISEc8 MNNTLPDNIEQLKALLIAQQAVIVRLSGEITGYAREISSLRALVAKLQRM LFGRSSEKSREKIEKKIARAETRITELQNRLGEAQLQLTSMAGETAPKTS DSPVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTA FRVIETVRPKRACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEH LPLYRQSEIYARQGVELHRNTMGRWVDIMGEQLRPLYDELKHYVLMPGKV HADDTPVNVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKG IHPQQHLADYRGILQADAYAGYNALYESGQATEAACMAHARRKIHDVHVR HPTTVTGEALRRIGELYAIEAEIRGSPAEERLAVRKARTVPLMQSLYEWL QGQMNTLSRHSDTAKAFTYLLKQWDALNEYCRNGWVEIDNNLCENALRVV ALGRRNYRTWFLPGKGNGTKESWFFRNRPHHE >Z2254 partial H repeat-associated protein of Rhs element MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDF GETHPDVLK >Z1598 unknown in ISEc8 MEQKILSSEPRRSFSNEFKLQMVKLASQPGAXVARIAREHDINDNLLFKW LRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTP SQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR >Z2851 putative enzyme MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTG KTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALL KGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVS VAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHL FLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSSRQLLDL AKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA NPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLK EINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLS VNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSK GQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLL KARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR >Z4375 hypothetical protein MTNLTLDVNIIDFPSIPVAMLPHRCRPELLNYSVAKFIMWRKETGLSPVN QSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYA VARHVGELDDISHTIWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQR LETNVYVPLA >Z4334 IS629 transposase MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z1122 hypothetical protein MVHNGAGVRDSSRTLKVDINTVILTLKNAHHVK >Z0854 hypothetical protein MRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQI KTDEKSNEITAPPELLNILDIKGKIITTDAMGCQKDIAEKIQKQGGDYLF AVKGNQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCEV PDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPKMTVRYYISSADLTAG KFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINI LTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS >Z1192 IS1 protein InsB MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV GAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMT DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV ELHDKVIGHYLNIKHYQ >Z1632 IS1 protein InsB MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV GAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMT DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV ELHDKVIGHYLNIKHYQ >Z1199 unknown in IS MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z6017 putative transposase fragment MFLALGINIAGQKELLGMRLAENEGANFWFNVLTELKNRGLNDILIACVY GLKEFPEARIQLCIVHMVRNSMRFVSWKEYKAVTRDLKAISLPQKRQASR HWKRLLRPGTAAIRR >Z1660 transposase for IS629 MPLLDKLXEQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLR GKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYI SLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRA EVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA >Z1570 unknown protein encoded in ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPQYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z6061 putative endonuclease encoded by cryptic prophage CP-933P MRIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQRLKLNL SGRLVIKIIAEPPDKRRRDLDNILKAPLDVLTHAGLLIDDEQFDEINIVR GQLVPGERLGIKITELECA >Z1927 unknown protein encoded by ISEc8 in prophage CP-933X MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENG INANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETL SISCEVTFRHGTLRFNGNVKRKAPDSADTGTEAMIPLPXGTKNLAGLPVS PI >Z4193 type III secretion apparatus protein MQLKNLQSLLDMKELLGEVVFRQDIFYSLRKVTVIQQQIAEINLEKQKIA ERRKILNKEIVQQQAQRKHWWLKGEKYDRLKKRIKKQLLNQMLYQDELEQ EEKYNGRSQEN >Z2804 unknown protein encoded within IS629 MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1160 unknown in ISEc8 MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLDENPFSGHLFIFRGRR GDTIKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKL DWRQPKTSRLNALTML >Z2127 putative IS encoded protein encoded within prophage CP-933O MARGKAAITFFREPPATSCDSRCSCRTARIARRGPGNPQYQLLGNVPARA APLQWQCQRKAPDSADTGTEAMIPLPSGTKIWLVAGITDMRNGFNGLAAK VQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWP SARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML >Z2082 putative transposase within CP-933O; partial MDTTLSNSSDSDQTVQAVRLPDVSPALVSKVTDAVMEQVVEWQNRPLDAV YPIVYLDCIVLKVRQDSRVINKSVFLALGINIEGQKELLGMWLAENEGAK FWLNVLTELKNRGLNDILIACVDGLKGFPDAINTVYPEARIQLCIVHMVR NSLRFVSWKDYKAVTRDLKAIYQAPTEEAGQQALEAFASAWDSRYPQISR SWQANWTNLAMFFAYPADIRKVIYTTNAIESLNSVIRHAIKKRKVFPTDD SVKKVVWLAIQAASQKWTMPLRDWRMAMSRFIIEFGDRLDGHF >Z2389 putative DNA modification methyltransferase encoded within prophage CP-933R MNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQE DVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMH FYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAFNLVSGDYDILDPIKVK ASDYGAPTIRTRYFFIGVKKSLKLDISDEVFMPKMIDPVTVKDALYGLPD IIDANWQSDSESWRTIKKDRKGGFYEKLWGQIPRNVGDTESIAKLKNNII SGCTGTLHSKIVQERYASLSFGETDKISRSTRLDPNGFCPTLRAGTARDK GSFQAVRPIHPYHPRVITPREAARLQGFPDWFRFHVTKWHSFRQIGNSVS PIVAEYILKGLYNLLNKRVQPEYLNHNSLEVRV >Z3923 hypothetical protein MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDBWL KREIQRVYDENHQVXXCA >Z2079 putative IS encoded protein within CP-933O MHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSL ESWLREKMKTLSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENA LRAVSLGRKNFLFFGSDHGGERGALLYSLIGTCKLK >Z1642 hypothetical protein MLAVERAFSSQISVIEGPPGTGKTQTILNIVANILIQNKTVAILSNNNSA VSNVYEKMDKQQLGYVMARLGSTENRQQFFSTSISRSEEVLPDSPSANAI DDVLQQVKKHLNAINQVASLKAEINELNIEYKYLQQWQSQNLRPEELFSH KYRFSSQKTTDLMAYIHYLSDRRIGFRNRIDLLLNFMILKVKPLMIPERR LALFTSLQLSYYEKNIREKQISLNEYEEAFKKSDFKILLGRLTSWSMLYL KQHLRRNVSTRSSFSAETYRDEFDRFIKRFPIIGSSTHSIINSIGKGALL DYVIIDEASQQDIVPGILGLGCARNVIVVGDRKQLPHVPVLLPNSPSPPA EYYNCEKYSLLDSVCMLFRNMVPVTLLKEHYRCHPKIIQFCNKQFYDNAL IPLTVDSGEASLSLVITAKGNHTRNFSNLRELESLEGHYWDEESSRGYIA PYNAQVNLAEKVLPADFVKSTVHKFQGRECDEIVFSTVLDKKRSSQHSRN IAFVDNPELVNVAVSRARNKFTLVTGNDVFERHAGHIAALIRYIKYYADD GEIFESPVISAFDLLYSEYDKSLERLNSRLNSNDSHFKSEQIVACLLRDI LSQDSYRSMMFHSQIALNQLVLLERGDFTHREQLFMRNRASCDFVVYYKV GKTPLGVIEVDGGYHLTSVQAERDELKNSILKKCGLPLLRLRTIDSDIEG KLGAFLSGLTG >Z5089 putative transposase MLTQNGVPMSRYRAGRLMKYLNLSSCQPGKHQYKNARQEHTCLPNLLERQ FAVPEPDRVWCGDITYIWAGNRWCYLAVVMDLFARRVIGWSLSANADTAL ISSALRMAYEVRGQPRDVMFHSDQGSQYTGLKYQQLLWRYRIKQSVSRRG NCWDNSPMERFFRSLKTEWVPTDGYTGKDVARQQISSYILNYYNSVRPHH YNGGLTPEESENRYHFYCKTVASIT >Z2396 DNA replication protein DnaC MKNIATGGVLERIRRLAPPHVTAPFRTVAEWREWQLAEGQKRCEEINRQN RQLRVEKILNRSGIQPLHRKCSFANYQVQNDGQRYALSQAKSIADELVTG CTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDD GQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVG MLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVGQPGIEK >Z5878 putative integrase MSQRYKLYRRTSGIYVVRISVPQRFRRYAGQCEIHTSTGTHDLHEAKQKS ALLLAVWYQTLQEYEQLDYRTLSDCAPLLAGEGMISLSNFAQSIELPISQ LIREVVNRNLPVFWLATGQFGFYVDEFNAVEREPGAKREKQSDDEKDQPK EVIILNSAFELGIESFANGYLRPFNPRHTLDCLLSAGVSEGEAAFRTSGD NQSGGWFFDLPGVDITADSLLISKVHAEGLRLTWLVKTTPPAVSIHPAVP LVAPVIANEYVHRKHYNENLSWLREEYLKHRRKGKVSEAALRDIRYYFDL MIEVMGDIQLEDFDRDFLRAYESKLRTIPANRNLMKGKHGVKTLDELIAK AAECGDKLMTEESVKKYINGLYGAMEWAVDDGKFLKSPCDNFFPPDDKGE REQDHTDIFEPHEIKAIFSQPWFVAGTVERNAQGRFHQYCPFHYWAPLLG LMTGARVNEIAQLMLDDVLADDGVYYLNLESDSENGKKLKNANSRRKIPV HSTLIELGFIEYVDALKAAGYDRLFPELKPHKTKGYGRPVSAWFNESLLA GRLKLERDRSKSFHSFRHSVSTLLKEKGVSSELRGQLLGHVRGKTETEVR YSKDLKPVHMVEVVEKIDFSLPEIARFNIPDGLDAVRDALXXKRGKQTG >Z1162 unknown in ISEc8 MDISLLSTTSDPEQLRALAIAMVQKVMAENAELQNRIRILEEQMKLARQQ RFGKKCESLAGMQRSLFEEDVDADIAEISAHLDKLLPQTGDEEKTTTRPV RKPLPSPLPRAEKVIPPAEERCPDCDAPLHFIRDEVSEKLEYIPAQVVVN RYIRPQYSCPCCEKVFSGKMPAHILPKSAVEPSVIAQVVISKYTDHLPLY RQQHIFSRMGVELPVSTMADMVGVAGAALAPLAKLLRHELLTRDVIHADE TSLRLLDTRKGGKSCSGWLWAYVSGERVSVNGAPY >Z3943 hypothetical protein MEFSMENKCIESEQIFFAKMNRYSFKLSDKKWQLDKENCVYPHKVVDRMP TKMKLSYLKTLAYYASEYSSFYIQSINNLFYEWFGAMTIDTIDDKAIYQL NVYLGSERNYKLNLIKAFIIKWKNLNYPGVEATAIRMLEKIKIIPNQTGD AVKRRDPNKGPLTEAEFNNIINAVGKFYHEKKIQCFLYCYILLLAITGRR PLQLISLKAKDLIKNERGCFLNVPKVKQRKCFRKEFNMVMIEPFLYDSLS MLINQNQAFVEDKFSVGISNYRGELPIFMNLDKITETKRIEDFLYDLTTD FFHMKNSVMSKLLKHFPSKFDVRSERTNSYIELNARRFRYTLGSRLANEG ASIEVIAKALDHKSVNSSIIYIKNNPDNVYDIDKRLSAFFNPLSNILMGI EIEENKNFFIKFVSDAFFLLEDTKEDLKCLTCKKFNPWRAL >Z4338 unknown protein encoded by ISEc8 MISLPSGTRIWLVAGVTDMCKSFNGLGEQVQHVLNDNPFSGHLFIFRGRR GDTVKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKL DWRQPKTSRLNALTML >Z3161 unknown protein encoded by IS629 MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1863 putative phosphohydrolase MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAAR ELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSD IDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTK GVI >Z0946 putative integrase encoded by prophage CP-933K; partial MIILLRYIHGLIATKKSSPAEESSRRHFINYMSKIKAIRRGLPDAPLEDI TTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATR AAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEM KWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKEILGGE TIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYE KQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK >Z1198 putative transposase MPLLDKLHEQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLR GKKXRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYI SLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRA EVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA >Z5428 hypothetical protein MGWHHCQYHSFTALDVINNYVACLLLNRGKEAVMVANINLIKQESYSVVN LEKQLMSNESPKQSLLNDFSHRLKMEGEEQLFHCVNELKYGLSSNNEYDL FKNRETSLWKRKVPESAALAMTGTVYKLFGSRLLNARNQLDKNLLEMAMQ MVYGKDMVTKSGDILIDIQLNKDGSLQSKHYTFDVGEVINSYNIDLFVNA SSINQTYLHDKNPGDVISLYGTLDNIPLVVKECTGKNHQINVKAKLPQER SEKVEDMCERMRGGISMFNHTTKTAGNIEHNLQLSFLVDSRPSITNKYSA KDVAPDILVLPVNVYHADFKIKINNAVEKT >Z3093 unknown in IS629 encoded within prophage CP-933U MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1202 hypothetical protein MLAVERAFSSQISVIEGPPGTGKTQTILNIVANILIQNKTVAILSNNNSA VSNVYEKMDKQQLGYVMARLGSTENRQQFFSTSISRSEEVLPDSPSANAI DDVLQQVKKHLNAINQVASLKAEINELNIEYKYLQQWQSQNLRPEELFSH KYRFSSQKTTDLMAYIHYLSDRRIGFRNRIDLLLNFMILKVKPLMIPERR LALFTSLQLSYYEKNIREKQISLNEYEEAFKKSDFKILLGRLTSWSMLYL KQHLRRNVSTRSSFSAETYRDEFDRFIKRFPIIGSSTHSIINSIGKGALL DYVIIDEASQQDIVPGILGLGCARNVIVVGDRKQLPHVPVLLPNSPSPPA EYYNCEKYSLLDSVCMLFRNMVPVTLLKEHYRCHPKIIQFCNKQFYDNAL IPLTVDSGEASLSLVITAKGNHTRNFSNLRELESLEGHYWDEESSRGYIA PYNAQVNLAEKVLPADFVKSTVHKFQGRECDEIVFSTVLDKKRSSQHSRN IAFVDNPELVNVAVSRARNKFTLVTGNDVFERHAGHIAALIRYIKYYADD GEIFESPVISAFDLLYSEYDKSLERLNSRLNSNDSHFKSEQIVACLLRDI LSQDSYRSMMFHSQIALNQLVLLERGDFTHREQLFMRNRASCDFVVYYKV GKTPLGVIEVDGGYHLTSVQAERDELKNSILKKCGLPLLRLRTIDSDIEG KLGAFLSGLTG >Z1134 unknown in IS600 MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRL QTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLL NQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMT KELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMS RKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQR RHSRLGNISPAAFREKYHQMAA >Z6016 unknown protein encoded in ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1559 putative P4-family integrase MAVLTDTKARHIKPDDKPLPHGGITGLTLHPSSVKGRGKWVFRYVSPVTQ KRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPLEIKKAESEKVAIPT FADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSITAADV AETLRPVWLTLSETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQQ TRGRDEHQPAMPWRQLPLFVATSVYTDEPYNVTRALLLMVILTATRSGEA RGMRWAEIDFHKRVWTIPAERMKARIQHRVPLSRQAIYILENIRGLHDEL VFPSPRKQQILSDMVLTSFLRKKKAVSDIPGRVATAHGFRSTFRDWCSEQ GYSRDLAERALAHTLKNKVEAAYHRTDLLEQRVPMMQAWADYVMSQIVNK >Z0328 unknown protein encoded in prophage CP-933I MNDNFFTFRKIKVTGFNKLDAIIEFGSKLTILYGGSDSGKTYIYYLIRYL LGSEKLKNKDIDHAQGYDLAYLEFNFQGRVMTIERSLQDSAHYRLYDSSI ENVSEANLLMVFSKSASSKKSFSSYFYGRLNFKEAKVRTNLSNTLHKFNL NNVFEFFCIDELRVLTEKSLILSDIPSEETKRKSEFKFLLTQRDDTNSLA EKPNKKARYF >Z2771 putative excinuclease subunit MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLY IGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIK EQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRR AALQALQSIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS >Z2376 putative IS629 transposase within prophage CP-933R MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDXLAA >Z1500 unknown protein encoded by bacteriophage BP-933W MENEGDNIITLVQPKRDEEKLLNITVTGRKNYTQQSCKHRAIEVHEQDHV ILCLQCGCVVDPFQYVLRCANDGEAVVREIRQLHNRHDQLRESVASLERE EKNTKARLRAARTAILYAENDLKNIEQKVNQ >Z2101 putative endonuclease encoded within prophage CP-933O MRIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRDVALIVRQQRLKLNL SGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLIDDEQFDEINIVR G >Z1158 unknown in ISEc8 MALRKIAGLYRIEKFIRERPVEKIRQWRQRYSRPIVNDLFAWPEEQEPCC PPDGPLNKAINYILNRRDELSCFLSDGAVPLDNNICERAIRPVVMGRKAW LFAGSLMAGNRAAQIMSLLETAKRNGLEPHAWLTDVLTRLPEWPEDRLEE LLPLEGFTFSG >Z5200 hypothetical protein MVDNVTVSRVCIQSPSFVPDLDGEKNKSQLFVDDIVAYLKSPSVYSLEKE GPLNHFVNHCSEVELGFYSDGAYSILVSRSKQQPEGMILTVSDADAINIV HISVSPVLIKFLDDIFTCLHTYPDDESFTKEQIKANSKYDIVDYNCLLHF TGKPKSLIECRHFALQYCIDSMNEHTGKVPLKAYYSSPEDIQKHIPFELE QQFNNLQKNPPPGTCVVASDKFGEALSVFFHRMEKEKLTHMTAIVQSQTH AMAVRLRIKKTPAGETEYVVSFYDPNATNTAVRYKANNCDSFGSLQSFIN IQQAKQKWVITDICSECVGITPYLPREQAHLLSGIENELQPPLSPPALFL LMRMGIYKNIVLFFDKLKNSQEMTASKALDILAAKSPEGIYGLCVLLYHN TIDKFNDYITNLKELTRKYNFSQEDLETLLLAKDNLGVSWIPRALKNNQN KIVKAWLLAIDDFEKEFGVNKNEILLRIGKEIDSIDDLNSAIRTNDYNVV NILLANIKAKMFKNELNKEDILKLMAAREKVAGASDKWTKASGLYSAIVK GHTKIVAAWMETAEVIASHYENDKDVVRELLSLSRNNAVCSLYVASYKTM SKQVIDVYLNAAIRLALQHGFTFDEILEQFTRDFDGKSFSLAVEKADDIY GSLAENIQNCGW >Z2253 H repeat-associated protein of Rhs element MRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQI KTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLF AVKGNQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDV PDELIDFTFEWKGLKKLCVAVSFRSIIAEQQNSRTAEQKKEPKNDGQILY QFC >Z5899 putative ATP-dependent helicase MNKQNYAPGMRVVIRDAEWRIRRADDSGDGGYLLTCDGISELVRGKEGLF LTKLEQKVEILDPAKTHLVEDESANYQAAQLYIESQLRQRVPTDSKVHFG HLAAMDSMPFQLDPTRMALAQPRQRILIADAVGLGKTLEAGILVSELIRR GRGKRILVLAVKSMLTQFQKEFWSRFAIPLTRLDSAGLQKVRNRIPTNHN PFHYFDKTIISIDTLKQDIEYRHHLENAWWDIIVIDEAHNVAERGTSSLR SKLAKLLAGRSDTLIMLSATPHDGKAESFASLMNMLDPTAIANPKEYEYA DFADKNLVVRRFKKDVKDQMSGEFPERNIVKLTRLASGAEEEAYRRLVES QFRDDDDEQAQSNKGRLFKITLEKALFSSPMACASVVANRLKRLESRKDH NSQSQINELESLLLALNNIDASQFSKYQLLLDTIRKDLAWKANNTEDRLV IFTESIKTLEFLEQQLRADLKLKDDQIATLRGDQGDTVLMETVEAFGKTQ SPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRIDRYGQK HQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQKNIGDSSEFTGKFTQ EEEEEQVAEFMMQDDGASLFDQLLNSNVSESAEHDLFGEICSAVSSDASM VTETDTSLFASEQAYCERALGYLKASGQTIQYETLPDNTLSLVAPEELRR RFNQLPPEIAPENWQLYLSQDKTVITDAIARARGEQHAWPDVQYLWQINP VVQWLDDKISSAFGRHQAPVIRLPYLLEPDEDHFILSGLFPNRKSHPMVN PWIVVSFNRESLIGSQPFAEFLQRHPQLSNKLTNSGGKDRNHQRQQDLLE AAIAHAREVFIHDRNAFETHINQQLNEHLQKLDVLRGRQLSQLELDFADN KQQLSVKQSRKEQRQREIEHNFDSYIEWIEDTMTTEKEPYIQVIAVITGA EG >Z1866 putative integrase of prophage CP-933X MAASPRSHKISIPNLYCKLDKRTGKVYWQYKHPLSGRFHSLGTDENEAKQ VATEANTIIAEQRTRQILSVNERLERMKGRRSDITVTEWLDKYNSIQEDR LQHNELRPNSYRQKGKPIRLFREHCGMQHLKDITALDIAEIIDAVKAEGH NRMAQVVRMVLIDVFKEAQHAGHVPPGFNPAQATKQPRNRVNRQRLSLPE WQAIFDSVSRRQPYLKCGMLLALVTGQRLSDICNLKFSDIWDDMLHITQE KTGSKLAIPLNLKCDALNITLREVISQCRDAVVSKYLVHYRHTTSQANRG DQVSANTLTTAFKKAREKCGIKWEQGTAPTFHEQRSLSERLYREQGLDTQ KLLGHKSRKMTDRYNDDRGKDWIIVDIKTA >Z4315 unknown protein encoded by ISEc8 MNSQTKKDIPCFRSYLPDALRLRFEDKLTIRAIAQRLGLSHSTIHTLFQR FIASGIAWPLPDSVSLAQLDAILYANRKKELTEPQISEGTWRKERRTSYS REFKIRLVKQALQPGAVVARIAREHGINDNLLLKWKSQYEDGLLSDDDIQ ECMPVPVALTDTPEPTRPVTNPFWRNKPDECPESDPGNVPRCELHLKSGV VKLFDPLTPEMLRALIREMKGGTR >Z1217 putative DNA repair protein, RADC family MQQLSFLPGEMTPGERSLILRALQTLDRHLHEPGVAFTSTRAAREWLILN MAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNA AAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF SFAEHGLL >Z1853 unknown protein encoded by prophage CP-933C MARPPKAPAYLDDIAVKQWREKSRQLAERGDLTPADWSNLELYCVNYSIY RKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLGFDPIS RRKNPPETEEEDELDRLE >Z0365 unknown protein encoded in ISEc8 MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENG INANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETL SISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR >Z1661 unknown protein encoded by IS629 MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z4801 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) MGRAGRGIDSAVGILLCGSEDRAIHKFFRESAFPAEAQIHEILNVLSVND GLTLRGIEQRTNLRYGQIEKALKLLVAENPSPVVYTEKLWRRTIVSFSPD HERINHLMNQRKSELADVESYITTKECKMQFLRRALDEPGAEHCGKCSSC LQHPLLSPDIDSGLLHAANLFIKHADLSLNLNKQVAAGAFTQYGFKGNLP ASLQGSTGRILSRWGYSGWGKQVAQEKKTGRFSDELVEACAEMVRQRWNP HPEPTWVCCVPSLKHLDLVPDFESTSTWFLILPGDWRRNLAYLLLMPLKK SWTIHRRKCSKTVSTSVKISTGRL >Z1933 unknown in IS629 MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z3297 putative transposase for IS629 MMPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDW LKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVL RGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVA FIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQY VSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR AEVELATLTWVDWYNNRRLLGRLGHAPPAEAEKAYYASIGNDDLAA >Z5880 putative transposase MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z5028 hypothetical protein MKQQEEHNNKIDLLEKQQAQLKSQLETIQKQQTGIISSTKTLTHVIKSVK DQQNTFIFTEFNPAKTKYFILNNGSVALAGRVLSIDATENGSVIHISLVN LLSTPISNIGFNATWGGEKPVDAKEFARWQQLLFNTSMKSTLKLLPGQWQ DINLTLKGVSPNNLGYLKLAINMENIQFDNLPSAENRQKRSKK >Z1131 unknown protein encoded in ISEc8 MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPQYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z1835 putative integrase of prophage CP-933C MMTGIKIMSRALNKLSDTQLRKINGTPAQKTAFLNDGGNLSVRHSTSGLL TWYFTYRAGTGRGAPPERIKLGNYPDLSLKSAREKAAQCRAWLAEGKNPR HELNYTVQEALKPVTVGDALTYWLESYAKENRVDYAALKKRLNNHVIQHI GAMPLDKCELRHWLACFDQVAKRTPVTAGFLLQTCKQALKFCRRRRYAIS NVLDDMSVADVGKKPDISERVLSTKELGELLQALDKKIFSPYYIALIRLL IVFGCRTVELRLSEISEWDFTEMLWTVPKEHSKTKVAIFRPIPEAILPFV TQLVEQNRHTGLLLGEVKQETSVSQYGRLAHRRLNHPHWSLHDIRRTFTT MLNDLGVDPHVVEQLTGHQMPGMQRVYNHSRYLDAKRNALDMWTERLGIL AGTHENVTTLPVARRK >Z2987 putative tail fiber component of prophage CP-933T MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNLERQARS FERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRL ERLNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLE RERQALARVTQARERYSHAQETAGKLKTGGALAIGAAAAGGYAAGRFLQP AIGFGKEMSRVQALTRIDKNSPQFKALREQALKLAETQFTASDAASGQSF LAMAGFTPQAIQAALPGVLNMALAGGVELGETADIGSNILTQFNLTADQM DRVGDTLTAAFTRTNTDLRALGETMKYTGPVAAKLGISLEEAAAMAGMLA NNGLRGSDAGTAMRASLSRLASPPKAAADALKELGVSVADARGKMRPMED VLLDLYKATQKYGQVDQVSFFKDIAGEXAFVGLQTLVAAAGSGELQKLTR ELQGARGEADRVAKVMADNLDGDLKNLDSAWEGLRIRISDLVDGPLRSVT QWLTRVLEKITSLAQAHPVLTRQLLIAGGALLAMTATIGSLSLVIGVLYG KLATLRLGFDILTRSMNVVRVLPALWGMVTGSVSLLGGVIGALFSPVGLI VAALAGAAVLIWKYWDPIRAFFAGVFSGIMERLTPLRDTFERFGPVFDVI GSGSARCLTGLNRCCHRWSPARKRWINVPVLARYSVTFLVVRYSLF >Z3024 hypothetical protein MVVTTSDVVMCQMRHSDVQGVYRVYGSWMAENFQDQVSISNQIMSKFAPS MPHAVRSDVINNRLHNLYLHAHYFLICRHQLITHLNPHLHRN >Z1159 unknown in ISEc8 MEQKILSSEPRRSFSNEFKLQMVKLASQPGAXVARIAREHDINDNLLFKW LRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTP SQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR >Z3922 putative transposase MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z3299 unknown protein in IS629 MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z5117 hypothetical protein MASLWKRLFYSSGRRRRYFEEGEHSFSILCGRLRGIVLTIKCSNGIIYLS IKVSPNNRNHVFLYHKKDYVFDKLKEIFPDEAIEFTIEYEN >Z1826 putative IS encoded protein MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWR KQY >Z1323 putative integrase for cryptic prophage CP-933M MGRPRKNKKDNVLPPRVRSNGYSYVWKPEGSTRSIGLGRVRKTSVAKVWQ NYELEKAKLHNIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQKALLMVF GKVLADNVKTEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKN NPCKGVRKFSLKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGD VLELKWQDIMDKGIYIEQNKTGTKQIKEWSPRLRTAIQLARNVSSCTCEY VINTTKGGKVIAKTLNNWWNQAKRAAEQKVGVPFGCNFHDIKAKGISDYE GSSRDKQIFSGHKTENQVLIYDRKTKITPTLDLPLVVSK >Z1958 unknown in IS629 MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z2894 exodeoxyribonuclease X MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVHPDRPISPQAMAI HRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTM KLARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDI MNTSGWTAEQMADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFN NLDSMSPELRLTLKHYLENT >Z0700 putative receptor MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDL GETHLNFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSS DDKDVIAIDGKTLRHSYDKSRRRRAIHVISAFSTMHSLVIGQIKTDEKSN EITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQG RLNKAFEEKFPLKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDF TFEWKGLKKLCVAVSFRSIIAEQKKESEMTVRYYISSADLTAEKFATAIR NHWHVENKLHWRLDVVVNEDDCKIRRGNAAELFSGIRHIAINILTNDKVF KAGLRRKMRKAAMDRNYLASVFAGSGLS >Z4502 orf; hypothetical protein in IS629 MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z6069 DNA replication protein DnaC MKNIAAVGVLERIRRLAPQGAVPPYRTVEEWREWQLAEGRKRSEEINRLN HQVRVEKILNRAGIQPLHRKCSFGNYRVQNDGQRHALSQAKSIADELMTG CTNFVFSGKPGTGKNHLAAAIGNRLMAKGRSVIIVTVSDVMSVLHDGYDN GQSGEKFLQELCGVDLLVLDEIGMQRDTRNEQVTLNQIVDRRTASMRSVG MLTNLNHAAMSTLLGDRVMDRMTMNGGRWVNFNWESWRSNVGRQGM >Z3759 DNA replication initiation factor MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQ NVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWF VPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLIT GDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL PEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL >Z5096 unknown protein encoded by ISEc8 within prophage CP-933L MGTKVSDMQKNVTPGRRKGCPNYPPEFKQQLVAASCEPGISISKLALENG INANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETL SISCEVTFRHGTLRFNGNVSEKLLTLLIQELKR >Z1929 unknown protein encoded by ISEc8 in prophage CP-933X MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRM NFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRK PFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRT VREKHACTQCDAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYRQ SEIYGRQGVELRRSLLSGWVDACCRLLSPLEEALHGYVMTDGKLHADDTP VQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTH LACFSGVLQADAYAGFNELYRNGGITEAACWAHARRKIHDVHVRIPSALT EEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT LSRHSELAKAFAYALNQWPALTYYANDGWVEIDNNIAENALRAVSLGRKN FLFFGSDHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVS ELLPWRIALPAE >Z3561 putative regulator MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGK ILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPF AEHGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARC DEFTPDSLKALALWMKRNAKNEAVETETAE >Z5885 putative resolvase MTMAIFGYGRVSTSQQDTENQRMELEQAGWTFDFWFSDVVSGKVPAVQRK AFFEMLSKIRDGETLVVAKLDRLGRDAIDVLQTVRTLADRNIKVIVHQLG TTDLTSAAGKLLLSMLAAVAEMERDLLIERTNAGLLRAKAEGRKLGRPAK IAPEARGAILDKRAAGVSVSALAREYGVSRATLAALLNKGY >Z1785 putative endodeoxyribonuclease of prophage CP-933N MRIEFVLXYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVRQQRLKLSL SGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAEVLIDDEQFDEINIVR GQPVPGGRLGVKIYEIRGGNDGA >Z2073 putative transposase within CP-933O MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQ LWVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQA LWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAE SINGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEA EKAYYASIGNDDLAA >Z4336 unknown protein encoded by ISEc8 MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z1597 unknown in ISEc8 MALRKIAGLYRIEKFIRERPVEKIRQWRQRYSRPIVNDLFAWPEEQEPCC PPDGPLNKAINYILNRRDELSCFLSDGAVPLDNNICERAIRPVVMGRKAW LFAGSLMAGNRAAQIMSLLETAKRNGLEPHAWLTDVLTRLPEWPEDRLEE LLPLEGFTFSG >Z2981 IS629 transposase encoded within prophage CP-933T MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLR GKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFSGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYV SLAYTERLKEAKLLASTGSTGDSYDNVFY >Z1657 putative DNA repair protein, RADC family MQQLSFLPGEMTPGERSLILRALQTLDRHXHEPGVAFTSTRAAREWLILN MAGLEREEFRVLYLNNQNQLIAGETXFTGTINRTEVHPREVIKRALYHNA AAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVF SFAEHGLL >Z5816 putative virulence protein MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALALQNENHEAGNKYI PYGKMASWLVEWKNATETQWLKDAPSQPLQQSLKDLERAYKNFFRKRAAF PRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNV TASQSCGKWYISIQTENEVSTPVHPSALMVGLDAGVAKLATLSDGTVFGP VNSFQKNQKTLARLQRQLSRKVKFSNNWQKQKRKIQRLHSCIANICRDYL HKVTTTVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSIL DQGWYEMRRQLEYKQLWRGGQVLAVPPAYTSQRCACCGHTAKENRLSQSK FRCQACGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQA TA >Z1123 unknown in IS1N MALICELDEQWSFVENKARQQWHWYAYKTKADGVLAYTFGPRTDETCREL PEFLKPFSAGMITRDNRSSYTREMPQDKHLVGKIFTRRIERNNLTLRTHI KRPARKTICFLRSLEIHEKPLVHLSKTHVLLTGVITRASFAVFLP >Z1133 partial putative transposase MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPH ERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRK RTA >Z5815 putative transposase MKKETDIRRGRHCVFLMHVHLVFVTRYRRQIFDHDATEKLRTYFSKVCAD FEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGRLLRRDRPDIA VRYYYKGVLWSPGYFASSCGGAPISAIRQYIEQQQTPG >Z2074 putative IS encoded protein within CP-933O MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQAXAYFAKA EFDRLWKK >Z1599 unknown in ISEc8 MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLDENPFSGHLFIFRGRR GDTIKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKL DWRQPKTSRLNALTML >Z1161 unknown in ISEc8 MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEK IEEEEREIEHLRAQIEKLRRMLFGTRSEKLQREVEQAEAQLKQREQESDR YSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGSELDY LGEVSAEQLELVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAG SGLLARVLTGKYCEHLPLYRQSEIFARQGIELSRALLSNWVDACCQLMTL LNDTLYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGRIWTYVRDDRNAGSS EPPAVWFAYSPDRQGKHPVQHLRPFRGILQADAFSGYDRLFSAEREGGAL TEVACWAHARRKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESER LAVRQQRSKVLLTSLHEWMVEKNGTLSKKSRLGEACSYVLNQWDALCYYS DDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRL NGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK >Z1163 unknown in ISEc8 MFSGLFAMLTPDNVFLVVKPVDMRRGIDTLTQYVQNELNAAWHDGAAFVF TNKVRSRIKVLRWDKHGVWLCTRRLHRGSFRWPRKGDATWHLTQDEFHWL VFGVDWQQVKGHDLAKWVYQ >Z3348 unknown protein encoded within prophage CP-933V MAKTSCEEMTMLLIQPGFGLSIKKGHMFGEKESQRKMVSIRLPFISIYWL NREATNYWYTCARAAFNDPDWFVKNHHAVRQAKRKANMTYMKAYQKAWKE HRDRYQQDMEKLESENMELRRKLGEAKRDIDAYKRLFNGESHA >Z1843 unknown protein encoded by prophage CP-933C MILGVATSLAAPLIGLVGADGFGVHLFEQSSAGKTTTQNIASSLWGEPDA QRLTWYGTALGIANEAEAHNDGLLPLDEIGQAGNAREVSTSAYTLFNGSG KLQGAKDGGNREIKHWRTVAISTGEMDVETFLKSEGIKVKAGQLVRLLNV PMEKATKFHEYSNGKEHADALKDAWTANHGAAGREWVKWLAGHQQEAKDT VRECRERWRNLIPESYGEQVHRVGERFAILEAALVLSGHVTGWVVQECRD AIQHNFNAWVKEFGTGNREFKQMVEQAEAFLSSFGFSRYLPHPNTDERDL PIKELAGYRKGSIRNEDDEMRYYTFPHVFESEIAKGFNPAHFARALDAAG MLEKGSDRRYKKKALGKIGGKQHVFYVLMFQPDDED >Z2806 putative transposase MPLLDKLREQYGVGPVCSELHIAPSTDYHCQQQRHHPDKRSARAQRDDWL KREIQRVYDENHQVYGVRKVWRQLLREGIRVARXTXARLMAVMGLAGVLR GKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAF IIDVFSGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYV SLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRA EVELATLTWVDWYNNRRLLGRLGHIPPAEAEKAYYASIRNDDLAA >Z2563 putative transposase (partial) MGANSKSSALFIRLLKRLKATYCRTKTITLLEDNYIIHKGRETQRWLKDK PKCRVIYQPV >Z1845 putative single stranded DNA-binding protein of prophage CP-933C MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAVSLPCSQAQDGQATLWLS VIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGYQVIADSVI SARAARPGGNRRKTTGTQGNQPPAGGDDPYGDGIPF >Z1208 unknown in putative ISEc8 MELQDWRKEPRKNYSNEFKLRMVELASQPGASVARIAREHDINDNLLFKW LRLWQNEGRISRRLQVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTS TQTSVSAGSCKVEFRHGNMTLENPSPELLTLLIRELTGRGR >Z2375 orf; hypothetical protein in IS629 within prophage CP-933R MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z0275 hypothetical protein MSIQSLLDYISVIPDIRQQGKVKHKLSDILFLTVCAVIAGADEWQEIEDF GHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKIFIEWMQECHEI TDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSN EITAIPELLNLLDLKKNLITIDAMGCQKDIASKIKDKKADYLLAVKGNQG KLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVSNVTPEFCDF EFEWKGLKKLCVALSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRA HWLIEHSLHWVLDVKMNEDASRIRRGNAAEIISGIKKMALNLLRDCKDIK GGVKRKRKKVALNTCYIEEVLASCSELGFRTDKMKNLTQI >Z6015 unknown protein encoded in ISEc8 MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z1207 partial transposase MATYGGQFTLTDNAMAESINGLYKAEVIHRKSWKNRAEVELATLTWVDWY NNRRLLERLGHTPPAEAEKAYYASIGNDDLAA >Z1772 unknown protein encoded by prophage CP-933N MKIKHEHIRMAMNAWAYPDGEKVPAAEIARTYFELGMTFPELYDDSHPEA LARNTQKIFRWLDKDTPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYY REIVERRDRLVKDVDDFVAAAIAWGTLTNSGGQPGNAVVVH >Z2429 unknown protein in IS629 MTKNTRFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGGGDGGLTSAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1639 unknown in IS MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z0067 ATP-dependent helicase HepA MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPV TRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREV FLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQ RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD FPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSST ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN NLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESL DQAGWRLDALRLIVVTHQ >Z1573 unknown in IS600 MCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRL QTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLL NQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMT KELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMS RKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQR RHSRLGNISPAAFREKYHQMAA >Z0395 hypothetical protein MTRKYLTQDEVYRLMDAAQSMSFPERNRCLIMMAFIHGFRASELLDLRLS DIDASGKQLNIRRIKNGFSTTHPLLPDEYNLIKLWLKQRKLIENGVEGDW LFLSRKRRPISRQHFFLSFVRLEDVQD >Z1589 unknown in IS MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARK GLGTPGSRTVAELESEILQLRKALNEARLERDILKKAAVDSICQCNTPFN YLFHCPRRYRLSV >Z3155 unknown protein encoded by ISEc8 MIPLPSGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z4318 hypothetical protein MVLLEHEYVMAKLINISASTEERMTPGERRVASRLESFLNDDCFVWYDIP VGRKNRHPDFVIIDPDNGLVFLEVKDWTVSTLRKANQEQVTLETDGLLKS EINPLVQVRRYACDTVNALPADPCLRQNDGQYKGRLNLAWAYGVVFTRIT RQQLKALTGNNENAVEKIFPSAQTICQDEMTQSVLPEVFRQKIAGMFTTG FRTRVTPRMRDILRAHLFPEVTVKQNSQIKIMDIQQEILARNIGDGHRVI HGVAGSGKTMILLFRCLYLAETTSGSYAAPVQLPGGRFHTGYCRSPPSHC GSIRSERPIASADR >Z1572 partial putative transposase MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPH ERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRK RTA >Z0322 unknown protein encoded by IS2 MQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCT TAISSPQSNGIAERFVKTMKEDYIAFMPKPNVRTALHNLAVAIEHYNENH PHSALGYRSPREYRRQRVTLT >Z1928 unknown protein encoded by ISEc8 in prophage CP-933X MFLTQXQLTMLLEGIDWRQPKRLLTSLTML >Z2057 putative endonuclease of prophage CP-933O MLIDLVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVVLIVRQQRLKLSL SGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGVLMDDEQFDEINIVR GQPVSGGRLGVKIYKIESE >Z1222 unknown in IS MTKNTRFSPEVRQRAVRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVW VRQHERDTGSGDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKA EFDRLWKK >Z1571 unknown protein encoded in ISEc8 MIPLPFGTKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRS GSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGI DWRQPKRLLTSLTML >Z1827 putative IS encoded protein MVRRLRFSGPKTSIICSPMTSLKTSIKTITYLSDTGCLEIQGASLVIYTT NAIESLNSVIRHAIKKRKVFPTDDSVKKVVWLAIQAASQKWTMPLRDWRM AMSRFIIEFGDRLDGHF >Z1802 unknown protein encoded by prophage CP-933N MLTTQKRKFALALMSGKNKTASAIAAGYSAKTARVKGSQLAKDPEVLAFI ARKQCETVEVDEVPVYRQKKSEQEDKPRRREAAAIPQPDENNPEMPPSAV MSPGIEYMEDGLPDPVKAMGRLLVENINTDPRLALDAAYKLAQFTHHKKG DAGKKSAKGDAAKKAANRFAVPPPPRLVVNNDNEGNG >Z1120 putative P4-family integrase MAVLTDTKARHIKPDDKPLPHGGITGLTLHPSSVKGRGKWVFRYVSPVTQ KRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPLEIKKAESEKVAIPT FADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSITAADV AETLRPVWLTLSETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQQ TRGRDEHQPAMPWRQLPLFVATSVYTDEPYNVTRALLLMVILTATRSGEA RGMRWAEIDFHKRVWTIPAERMKARIQHRVPLSRQAIYILENIRGLHDEL VFPSPRKQQILSDMVLTSFLRKKKAVSDIPGRVATAHGFRSTFRDWCSEQ GYSRDLAERALAHTLKNKVEAAYHRTDLLEQRVPMMQAWADYVMSQIVNK >Z5890 partial putative integrase MSILMSIFADSILLVYSRDTNGRKTIMALTDTKVRSAKPEEKEYSLVDGD GMSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKL VAAGIDPREHKRAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKS LEDNIFPTIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMR YAVQSGLIDYDPAQEMSGAVASSNRQHRPALELKRIPELLDKIDSYTGRP LTHCTTELTLLIFIRSSKLHFARWSEIDFETSMWTIPLDWYCSKQRVGLV Q >Z3471 ada, O6-methylguanine-DNA methyltransferase; transcription activator/repressor MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRARHALRE NVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPV TLEALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESV TTSILNAGFPDSSSYYHKADETLGMTAKQFRHGGENLAVRYALADCELGR CLVAESERGICAILLGDDDATLISELQQMFPAADNAPADLTFQQHVREVI ASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKP KAVRAVASACAANKLAIVIPCHRVVRGDGTLSGYRWGVSRKAQLLRREAE NEER >Z3237 alkA, 3-methyl-adenine DNA glycosylase II, inducible MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEYRGVVTA IPDIARHTLHINLSADLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGA ARPGLRLPGSVDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFP EYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPG DVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTP AQIRRYAERWKPWRSYALLHIWYTEGWQPDEA >Z3470 alkB, DNA repair system specific for alkylated DNA MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMV TPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLC QRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGL PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLT TDCRYNLTFRQAGKKE >Z4740 dam, DNA adenine methylase MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRY ILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNK SQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYH FAEKAQNAFFYCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNS FTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRAKLHVVKVRRS ISSNGGTRKKVDELLALYKPGVVSPAKK >Z2417 dbpA, ATP-dependent RNA helicase MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTG SGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPN TKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTL VMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQR DPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNT KKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEA QRANIISDMLQIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDV LGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT CRVRLLK >Z3054 dcm, DNA cytosine methylase MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAIL KRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIR RGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKE GVSDEAAAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACD TQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGY DVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGM VYPNNPQSVTRTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPR RLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL EPKIKQAVALRQQEAQHGRRSR >Z4523 deaD, inducible ATP-independent RNA helicase MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQ AECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPT RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTP GRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKN EALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQAL REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRI GRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRR LEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQ GERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERRDV GDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFSGERR EGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA >Z0285 dinJ, damage-inducible protein J MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFD LREPNQLTIQSIKNSEAGVDVHKAKDADDLFDKLGV >Z0292 dinP, DNA polymerase IV MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARK FGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPL SLDEAYLDVTDSVHCHGSATLIAQEIRQTIFSELQLTASAGVTPVKFLAK IASDMNKPNGQFVITPAEVSAFLQTLPLAKIPGVGKVSAAKLEAMGLRTC GDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMA EDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQ EHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLG L >Z5193 dnaA, chromosomal replication initiation protein MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDW VRDKYLNNINGLLTSFCGADAPQLRFEVGTKSVTQTPQAAVTSNVAAPAQ VAQTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLA RAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVY MHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEF FHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELE TRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFT GRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRS RSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE SHDIKEDFSNLIRTLSS >Z5650 dnaB, replicative DNA helicase MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDD VAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSV GGFAYLAELSKNTPSAANISSYADIVRERAVVREMISVANEIAEAGFDPQ GRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQP HDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAM LQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGT MGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRV PALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNS DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR LTFNGQWSRFDNYAGPQYDDE >Z5961 dnaC, DNA replication protein DnaC MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRA MKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIA SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSG TSEEQLLNDLSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGM LTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRVTGKEY >Z0196 dnaE, DNA polymerase III subunit alpha MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGL VKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLL ISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSAL VDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATN DVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELF ADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL EERLAFLFPDEEERVKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQW SKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP DFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARK LEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAG LVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDN FIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGY TLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAELAMKIFDLVEK FAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGL VDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAII EARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVL DGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLV VAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQHLLEKDRILIV SGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNR LRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLI GSEQVELEFD >Z4419 dnaG, DNA primase MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSF TVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE AGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSH EVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRF RERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYE AQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLIS QVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNXCLSQPGLTT GQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSXNHMFDSLLELR QEELIARERTHGLSNEERLELWTLNQELAKK >Z5192 dnaN, DNA polymerase III subunit beta MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLE MEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVR SGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQD VRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGV IELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPK NPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIE DAASQSAAYVVMPMRL >Z0241 dnaQ, DNA polymerase III subunit epsilon MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHV YLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNA AFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCA RYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEA TIQRLVRQASKLRVVFATDEELAAHEARLDLVQKKGGSCLWRA >Z0587 dnaX, DNA polymerase III subunits gamma and tau MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVG KTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTK VEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHV KFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP RALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQAL SLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVE MTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQA PTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERL ASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKA LEHEKTPELAAKLAAEAIERDAWAAQVSQLSLPKLVEQVALNAWKEESDN AVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEDSIRPI >Z4290 endA, DNA-specific endonuclease I MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGC KINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQD GGRKNCXKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQ CAMKVDFKEKAAEPPARARGAIARTYFYMRDHYNLTLSRQQTQLFNAWDK MYPVTDWECERDERIAKVQGNHNPYVQRACQARKS >Z5910 fimB, recombinase involved in phase variation; regulator for fimA MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASE ICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYP HAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFA LANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL >Z5911 fimE, recombinase involved in phase variation; regulator for fimA MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHY QDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTLERANWKGADRTD AIFISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERG ADTRLIQDYLGHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV >Z4621 fis, DNA-binding protein Fis MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDL YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >Z3484 gyrA, DNA gyrase subunit A MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLY AMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY MLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYD GTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDD EDISIEGXMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEV DAKTGRETXIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDI IAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHA PTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLME VIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVK YQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY SMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMAT ANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAE GKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQN GYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITD AGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDT IDGSAAEGDDEIAPEVDVDDEPEEE >Z5190 gyrB, DNA gyrase subunit B MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDE ALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHA GGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVP QAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSG VSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGI GVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVE QQMNELLAEYLLENPTDAKIVVGKIXDAARAREAARRAREMTRRKGALDL AGLPGKLADCQERDPALSELYLVEGXSAGGSAKQGRNRKNQAILPLKGKI LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDAD VDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDE AMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFD VHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGL LEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQL WETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAA NIDI >Z1313 helD, DNA helicase IV MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKR GLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIAS GVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFD NCREAWRKCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPA QARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFG RKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVSKLENDT AARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQR RLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWK GALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDT TYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALL DKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQ QADYVLIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVAL TRARHRVWALFNKENPSPFVEILKNLDVPVARKP >Z2741 himA, integration host factor alpha subunit MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFG NFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE >Z1258 himD, integration host factor beta subunit MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGS FSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG >Z0787 holA, DNA polymerase III subunit delta MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEH HTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTL TGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRW VAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLP RVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTL QRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ AVQLLTRTELTLKQDYSQSVWAELEGLSLLLCHKPLADVFIDG >Z1738 holB, DNA polymerase III subunit delta MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLC QQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKL NEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPER LLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGA ALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLAT LLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL >Z5871 holC, DNA polymerase III subunit chi MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAY RLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLR TSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK >Z5973 holD, DNA polymerase III subunit psi MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALT DPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEG AQVASPALTELRANPTARAALWQQICTYEHDFFPRND >Z2313 hrpA, helicase, ATP-dependent MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARP EITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGR GIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPR RPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADD TERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTE ILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTA RISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLL EELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAM IITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQ KALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEY REIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVM VAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMAT EKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFREN LKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIGHDVISARHFDSWWKK VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFV PAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHL KITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHI WSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNG LRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQ LIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKR LKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR LEKLAVDPHRDRAQMLKVENVQQAWQQWFNKLPPARREDEDVKEIRWMIE ELRVSYFAQQLGTPYPISDKRILQAMEQISG >Z0159 hrpB, helicase, ATP-dependent MLQCGAKNVNPLERFVSSLPVAAVLPELLTALDYAPQVLLSAPTGAGKST WLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMR AQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLA LALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVER RYLPLPTHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASR IGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIR LVVDCAQERVARFDPRTGLTRLITQRISQASMTQRAGRAGRLEPGICLHL IAKEQAERATAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVN LLAAKRLLQMLGALDGERLSAQGQKMAALGNDPRLAAMLVSAKSDDEAAT AAKIAAILEEPPRMGNSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADS SLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDADDALSRHEWLIAP LLLQGSASPDARILLALPVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAW RRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRL RLLCAGKWLPEYDWPAVDDESLLATLETWLLPHMAGVHSLRGLKSLDIYQ ALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMF GEATNPTIAQGRVPLVLELLSPAQRPLQITRDLGAFWKGAYREVQKEMKG RYPKHVWPDDPANTAPTRRTKKYS >Z5576 hupA, DNA-binding protein HU-alpha (HU-2) MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTF KVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK >Z0547 hupB, DNA-binding protein HU-beta, NS1 (HU-1) MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTF AVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN >Z3613 intC, putative prophage integrase MDKIILPTGFLPMLTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQ LRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAKKASS NNNSFSAIYKEWYEHKRQVWSAAYATELAKMFDDDILPIIGGLEIQDIEP MQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLAEA MKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKEL RSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPV SEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHE WPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDGKVE >Z0307 intH, putative integrase for prophage CP-933H MHKHAAANVAQRNRLNGKQIGFWLQHFAGMQLRDITESKIYSAMQKMTNR RHEENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAERE WKMLDKAPIIKVPQPKNKRLRWLEPHEAQRLIDECPEPLKSVVEFALATG LRRSNIINLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQI GNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRF HDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQ IDSILNPSVPNLSQSKNKEGTNDV >Z5087 intL, putative integrase for prophage 933L and the LEE pathogenicity island MALTDVKVKTAKPKERPYKLADGGGMYLLINANGSKYWRMKYRFAGKEKM LSIGVYPDVTLADAREKRSEARKILAAGGDPGEAKKEEKIALQMSLKNTF EAVAREWHQTKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKPMELLE ALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPK KVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIMLTGVRTQELRFAHW EDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHPLVFI GRNDPRKPISKESINQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWI EMQLAHVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSELA >Z1764 intN, partial integrase for prophage CP-933N MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTDKGKAEK IASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRL KNGDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMV STARVNRGLWVDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDW QKIYNATPEKHFIRNAMLLAIVTGQRRDDICHMRFSDVWNEHLHITQGKT GMRLALPLTLRCDAIGITLKEVIDGCRDRILSPYLIHSRHQKQPKPMSKD NLSDYFAKARDLAGVIPPAGKTPPTFHEQRSLSERLYRAQGIDTKTLLGH KVQATTDRYNDTRGQEWVKLVI >Z2036 intO, putative integrase for prophage CP-933O MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSIDQKLAET IAAEANSRLARQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYE NGEIKLNTLKQKAAPLRVFDERFGTRPLDAITVKDVVSVLEEYKARGHNR MGQIFRKVLIDVFREAQQTGDVPPGFNPAESAKKPQVRISRQRLTFDEWM MIYNAAEKDGYFLQRGMLLALMTGQRLSDICKMQFSDIRDGYLHVEQQKT GTRIAIPLALRCDKLNLTLDDVVSSCRDCVLSPWLLHHHHAKGTAKRGGM VKPATLTVAFKKARDSVDYNWRANGTPPSFHEQRSLSERLFREQGVDTKI LLGHSNQKMTDIYNDARGKEWKKLVI >Z2566 intP_1, integrase fragment, cryptic prophage CP-933P MREVEMKYPTGVENHGGKLRIWFVYKGVRVRENLGFLTQQKTGALQVSYA PLFVTQ >Z2568 intP_2, integrase fragment, cryptic prophage CP-933P MEKFGEARQDLTIKELAEKFLALKETEVAKTSLNTYRAVIKNILSIIGEK NLASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNA VFQFGVDNGYLADNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAK NLWCNTVLSGDF >Z2415 intR, putative integrase for prophage CP-933R MSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEVTNSNIKKAGNLRALI VHEINSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTT NTMKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPR SNKKGRTVRTVDNYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPD PLSKTEFNALMESEKGQSQNLWKFAVYSGLRHGELAALAWEDVDFEKGVV NVRRNLTILDMFGPPKTNAGIRTVTLLQPALEALKEQYKLTGHHRKSEIT FYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNAAVKRAGIR RRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMND EQVAMLNARLS >Z2966 intT, integrase for prophage CP-933T MSVRKIPSGKWLCECYPYGASGKRIRKQFATKSEALSYERRLMNSRVGDE FQDGSGPRLSELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFD KNMFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWS GENPLTGIRKFREEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLA TGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQLQAMLPKKRGA LFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKI LGHSDIKMTMRYAHFAPGHLEAAVELNPFDNRG >Z3130 intU, putative integrase for prophage CP-933U MGRRRKNPEHEKLPPKVYPNKYSVWKPTSRESVTLTAIEDGLAALWKKYE ETVNHRDRAMTFGRLWEKFLASAYYSELSPRTQKDYLQHQKKLLAVFGKV LADSVKPEHIRRYMDKRGEQSKTQANHEKSSMSRVYSWGYERGYVKANPC AGVSKFKAKNRERYVTDKEYQAVLSVAPLPVFIAMEIAYLCAARVSDVLS LKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQAAIEKAKQLPTSAYVISNQ YGNRYMYKGFNEMWVEARNHAGKISGILTDFTFHDLKAKGISDYEGSSRD KQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPRKYSK >Z3375 intV, putative integrase for prophage CP-933V MSNASYPTGVENHGGSLRIWFHYNGKRVRENLGVPDTAKNRKIAGELRTS VCFAIRMGSFDYAAQFPNSPNLKHFGLGKREITVKALSEKWLDLKKIEIC ANALNRYQSVIKNMLPMLGEKKLVSSITKEDLLFVRRDLLTGYQKLSNGK TSSIKGRSVVTVNYYMTTIAGMFQFATDNGYTSGNPFNGLAPLKKSKVKP DPLTRDEFIRFIEACRHQQTKNLWILAVYTGIRHGELVSLAWEDIDLKAR TITIRRNYTKLGEFTPPKTDAGTGRTIHLVQPAIDALKSQAEMTMLGKQH SVEVKQREYGRTAVHKCTFVFSPQVTKQQQLSGPHYKVDSIRESWTSILK RAGLRHRKSYQSRHTYACWSLAAGANPSFIASQMGHTNAQMVFNVYGAWM KDNNHEQIELLNKRLSESVPCMPHKKAG >Z1424 intW, integrase for bacteriophage BP-933W MLLDAGGTMANSAYPAGVENHGGKLRITFKYRGKRVRENLRVPDTPKNRK IAGELRASVCFAIRTGTFDYADRFPDSPNLKLFGLVKKDITVGELAQKWL TLKAMEIGSNALNRYQSVMKNMLPRLGPGRLASSITKEDLLFIRKDLLTG EKGSRKTSTSRKGRTVPTVNYYMTTTAGMFSFAAENGYLEKNPFNSITPL RKSKPVPDPLTRDEFSRLIDACHHQQTKNLWTVAVFTGMRHGEIAALAWE DIDLKAGTITVRRNFTKIGDFTLPKTDAGTNRVIHLLAPAIEALKNQAML TRLSRQHQITVQLREYGRTILHECTFVFCPQIVRKNHKAGINYAVSSIGA TWDSAIKRAGIRSRKAYQSRHTYACWALSSGANPTFIASQMGHSSASMVY NVYGAWMPECSVTQVAMLNNVLNARAPDVPQSDQEDEIKLYFSK >Z3677 lig, DNA ligase MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHP ELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQD RLKSNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVR TIRAIPLKLHGENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPR NAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHLGRLLQFKKWG LPVSDRVTLCESAEEVLAFYXXXEEDRPTLGFDIDGVVIKVNSLEQQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAG VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTR EVVFPTYCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNAL EKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVP DVGIVVASHVHNFFAEESNRNVISELLAEGVHWXAPIVINAEEIDSPFAG KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLA KAQELGIEVIDEAEMLRLLGS >Z1754 mfd, transcription-repair coupling factor; mutation frequency decline MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQ NALRLHDEISQFTDQMVMNLADWETLPXDSFSPHQDIISSRLSTLYQLPT MQRGVLIVPVNTLMQRVCPHSFLHGHALVMEKGQRLSRDALRTQLDSAGY RHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQ RTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSK GTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLENSAERFQADTL ARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAAN ANLGFQKLPDLAVQAQQKAPLDALRKFLESFDGPVVFSVESEGRREALGE LLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLE AGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAW SRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE TTPDQAQAINAVLSDMXQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHK QVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEVA EGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVD ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVRE AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMREREL ERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDL EIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQ QTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRF GLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWL IGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA >Z4149 mutH, DNA mismatch repair protein MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENLKRDKGW IGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPL TGNSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEE DRQLREDWEELMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGAR GERILTLPRGFYLKKNFTSALLARHFLIQ >Z5777 mutL, DNA mismatch repair protein MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGG AKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALA SISSVSRLTLTSRTAEQQEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDL FYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYR AVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWVADPNHTTPAL AEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRP IPENRVAAGRNHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQ QGEVYRQLLQTPAPMQKPKAPEPQEPALAANSQSFGRVLTIVHSDCALLE RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSAL EKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQS VFEPGNIAQWIARNLMSENAQWSMAQAITLLADVERLCPQLVKTPPGGLL QSVDLHPAIKALKDE >Z5059 mutM, formamidopyrimidine-DNA glycosylase MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVL SVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNG KVLRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKK KTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLAR VIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTP IVATKHAQRATFYCRQCQK >Z4043 mutS, DNA mismatch repair protein MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQL LDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPA TSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDI SSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRP LWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRT TLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVT PMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLER ILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEF AELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAER YIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALA ELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANP LNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVXIGPI DRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTS TYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDAL EHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESIS PNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLK SLV >Z0109 mutT, 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAV VRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVESWEGEPWGKEGQ PGKWMSLVGLNADDFPPANEPVIAKLKRVYVG >Z4306 mutY, adenine glycosylase; G.C --> T.A transversions MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIP YFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLH GGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYA VSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCS LCPLQNGCIAATNNSWSLYPGKKPKQTLPERTGYFLLLQHEDEVLLAQRP PSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLTQLTAFRHTFSHFHLD IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV >Z0865 nei, endonuclease VIII and DNA N-glycosylase with an AP lyase activity MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVET RGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEESQTTRVLRVKLQTADKT ILLYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFR NRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAH ALLDIPRFSYATRGQVDENKHHGALFRFKVFHRDGELCERCGGIIEKTTL SSRPFYWCPGCQH >Z5574 nfi, endonuclease V (deoxyinosine 3'endoduclease) MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMV LLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLV FVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALA PLMDKGEQLAWVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPE PTRWADAVASERPAFVRYTANQP >Z3416 nfo, endonuclease IV MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTID EFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQ LGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQ GSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTF ADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGBIGHDAFRWIMQD DRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA >Z2644 nth, endonuclease III; specific for apurinic and/or apyrimidinic sites MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKA TAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKXCRILLEQH NSEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQF APGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIE DLCEYKEKVDI >Z2917 ntpA, dATP pyrophosphohydrolase MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAP QAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTE SWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA >Z5571 nudC, NADH pyrophosphatase MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQ GEPVWLIQQQRRYDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGY CGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHR NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKHLRYVTSQPWPFPQSL MTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA MCRAEYE >Z2432 ogt, O-6-alkylguanine-DNA/cysteine-protein methyltransferase MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEG YERISATNPGGLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTI PCGQVMHYGELAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMT GYAGGVQRKEWLLRHEGYLLL >Z4373 parC, DNA topoisomerase IV subunit A MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMS ELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLV DGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGT LQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPK TTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDG AVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEW LVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPK PALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI LASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPV TIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTG RSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDA GYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAG RMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTI HVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEIDSPRRASSGDS EE >Z4387 parE, DNA topoisomerase IV subunit B MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAG HAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKF SNKNYQFSGGLHGVGISVVNALSKRVEXNVRRDGQVYNIAFENGEKVQDL QVVGNCGKRNTGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEI TFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVD WALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNI LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVV KDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGK LADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIAT LLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQ LKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTD AMMDMLLAKKRSEDRRNWLQEKGDMAEIEV >Z0859 phrB, deoxyribodipyrimidine photolyase (photoreactivation) MTTHLVWFRQDLRLHDNLALAAACRNSSARLLALYIATPRQWAAHNMSPR QAELINAQLNGLQIALAEKGIPLLFREVDDFAASVEIVKQVCAENSVTHL FYNYQYEVNERARDVQVERTLRNVVCEGFDDSVILPPGAVMTGNHEMYKV FTPFKNAWLKRLREGMPECVAAPKVRSSGSIKPAPSITLNYPRQSFDTAH FPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPR QCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLMTYYPSLCKHCPFIA WTDRVQWQXNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITAS FLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIF NPTTQGEKFDREGEFIRQWLPELRNVPGKSVHEPWKWAEKAGVKLDYPQP IVEHKEARVQTLAAYEAARKGK >Z0318 pinH, DNA invertase from prophage CP-933H MASFLLLSGRSTMLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGT KSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVILVEELRERGVNFR SLTDAIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLEAARAQGRIGG RRPKLTPEQWAQAGRLIAAGIPRQKVAIIYDVGVSTLYKKFPAGDK >Z5398 polA, DNA polymerase I MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLI MQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVK AMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNIT LINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKT AQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLA TIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAP VFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRER ALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAE DADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPK VLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYV IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVT SEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLE YMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQG TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHRDDVDAVAKQI HQLMENCTRLDVPLLVEVGSGENWDQAH >Z0068 polB, DNA polymerase II MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQV PRAQHILRGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGG VTVYEADVRPPERYLMERFITSPVWVEGDMHNGAIVNARLKPHPDYRPPL KWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASALDFELEYVAS RPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDN SELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMP FLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASP GGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFY GVLGTTACRFFDPRLVSSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTF VWLKGAHSEEEATKIGRALVQHVNVWWAETLQKQQLTSALELEYETHFCR FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQ ELYLRIFRNEPYQEYFRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVP PHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYE HYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF >Z5482 priA, primosome assembly protein PriA MPVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQQERIGVVVSVS DVSELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL PILLRQGRPAANAPMWYWFATEQGHAVDLNSLKRSPKQQQALAALRQGKI WRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLN TEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP LFLQQLRNLILSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR LQHIINGTLALINTIPDSRKVKWVLDVDPIEG >Z5810 priB, primosomal replication protein N MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQM PVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI DSGD >Z0584 priC, primosomal replication protein N'' MKTALLLEKLEXQLATLRQRCAPVSQFATLSARFNRHLFQTRATTLQACL DKAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREATAWSLREWDS APPQIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVE AYEARLARCRHALEKIENRLARLTR >Z5062 radC, DNA repair protein RadC MKVKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEM LENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREE SPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHV EVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFM DLRVLDHIVIGRGEYVSFAERGWI >Z0492 rdgC, recombination associated protein MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMG SHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLK KTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDT LALLRKSLGSLPVVPLSMANPIELTLTEWVRSGSAAQGFQLLDEAELKSL LEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSL KRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE AQR >Z4002 recA, recombinase A MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDI ALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHAL DPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVNVIVVDSVAAL TPKAEIEXEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKI GVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKN KIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIG QGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETN EDF >Z4137 recB, DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease MSDVAETLDPLRLPFQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAF PRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERL LEEIDDKAQAAKWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQ QLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRY LQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESS GIDRRKFNRSNQAKWIDKISAWAEEERNSYQLPESLEKFSQRFLEDRTKA GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELG FDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRI WHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMK MWLMEGESCGVGDYQSTMAQVSAAQIRDWLQAGQRGEALLMNGDDARPVR ASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQ IWRKRGVMPMMRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQ LESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYP LVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPESVDLAEVERLAEDLR LLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDA AGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDN WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGAS PGTFLHSLFEDLNFTQPVDPNWVQEKLELGGFESQWEPVLTEWITAVLQA PLNETGVSLSQLSDRDKQVEMEFYLPISEPLIASQLDALIRQFDPLSAGC PPLEFMQARGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAA AMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIYLFLRGVDKEH PQQGIYTTRPNAGLIDLMDEMFAGMTLEEA >Z4139 recC, DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL SQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP QLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWE TGHLVEGLGEAQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESA TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD IKDPAYLAKLLTRQRRHSFEDHELPLFRDSENAGQLFNSDGEQDVGNPLL ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNALFL PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCY DAQNDAMLDDDSTLQKARTKFLQAYEGNMMVSGEGDDIWYQRLWRQLTPE TMEAIVEQSQRFLLPLFRFNQS >Z4136 recD, DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGH VCLPLSRLENNEESHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPM ILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPTGDE INWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR LAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGS QRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGTHVPAGTGTEAASLRD SLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQS GEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG VAGLNERIEQFMQQKRKIHRNPHSRWYEGRPVMIARNDSALGLFNGDIGI ALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAA LILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL AALFXSRE >Z5191 recF, recombination protein F MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGR AFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGT DGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTA WSNLKRLLKQRNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIA ADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFERDRQLTYTAHG PHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTV EKGKITD >Z5078 recG, DNA helicase, resolution of Holliday junctions, branch migration MGYYAGCRVSAMTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLH LPLRYEDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGS GILTMRFFNFSAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDL STPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIEELLPPELSQ GMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLAL RAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARVVAEIERDMALDVP MMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRN WFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFN GLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTA YADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWV CTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASF KQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGA VASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTR QTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIERWMPETER YSNA >Z4230 recJ, ssDNA exonuclease, 5' --> 3' specific MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLP WQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGC SNIDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHAR SLGIPVIVTDHHLPGDTLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLML ALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPLDANNRILTWQ GMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERS RDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSG RSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLF DGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREV QLAYKLDINEFRGNRSLQIIIDNIWPI >Z3909 recN, protein used in recombination and DNA repair MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRA EADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSD GRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYA NETSLLQEMTARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEF NPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDANLQSQLYTAK QLVSELIGMDSKLSGVLDMLEEATIQIVEASDELRHYCDRLDLDPNRLFE LEQRISKQISLARKHHVSPETLPQYYQSLLEEQQQLDDQADSQETLALAV TKHHQQALETARALHQQRQHYAEELAQLITDSMHALSMPHGQFTIDVKFD EHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALAIQVITARK METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGH QHYFVSKETDGAMTETHMQSLNKKTRLQELARLLGGSEVTRNTLANAKEL LAA >Z3846 recO, DNA repair protein RecO MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGAL QPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVL EYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTH CAGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDAD TLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTHYE >Z5343 recQ, ATP-dependent DNA helicase MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMP TGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNST QTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEA HCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGL NDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAK VEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWL RRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCG NCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIR DYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAA RPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIAD ESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL IRAHVDGDDEE >Z0589 recR, recombination protein RecR MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRA MSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQ FSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEG EATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIR F >Z2410 recT, recombinase, DNA renaturation protein encoded by prophage CP-933R MTKQPPIAKADLQKTQGNRAPAAIKNNDVISFINQPSMKEQLAAALPRHM TAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYL LPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFNF EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSQ SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID PADSSVLTGEYSVIDNSEE >Z5288 rep, rep helicase, a single-stranded DNA dependent ATPase MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHI AAVTFTNKAAREMKERVXQTLGRKEARGLMISTFHTLGLDIIKREYAALG MKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPA QAAAEAKGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEV RERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDDQSIYSW RGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYR GNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDS AFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEM RMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELD QVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAE ERMQKGQSHLANLKAMMAAKRGK >Z5290 rhlB, ATP-dependent RNA helicase MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVA GQAQTGTGKTMAFLTSTFHCLLSHPAIADRKVNQPRALIMAPTRELAVQI HADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK QNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSAT LSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA GANGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT RPRTGNGPRRTGAPRNRRRSG >Z1017 rhlE, putative ATP-dependent RNA helicase MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTG KTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK YLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQV EILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEK LLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLV FTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC VDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG QGGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRK PAAAQ >Z0239 rnhA, ribonuclease H MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELM AAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKN VDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTG YQVEV >Z0195 rnhB, ribonuclease HII MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLS EKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHI APEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAAL DIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS >Z2671 rnt, ribonuclease T MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQG WLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIF KVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFD TAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNR WKRLGGWPLPAAEEV >Z1873 rus, endodeoxyribonuclease RUS (Holliday junction resolvase) of prophage CP-933X MNTYSITLPWPPSNNRYYRHNRGRTHISAEGQAYRDNVARIIKGSMLDIG LAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVV KMPVTKGGKLELTITELGNE >Z2913 ruvA, Holliday junction DNA helicase motor protein MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTH FVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVN AVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTS PASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALR AAL >Z2912 ruvB, Holliday junction DNA helicase RuvB MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKL RGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAM LTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKI DLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFM GLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQA LDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP >Z2915 ruvC, Holliday junction resolvase MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYA GVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVF EYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITH CHVSQNAMQMSESRLNLARGRLR >Z3173 sbcB, exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGEPEVFY CKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCIL GYNNVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPE GINWPENDDGLPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTR QPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLA WHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKTDLGDNAAVPVKL VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAI FAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVD KRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYAEEIQML AQQYAXDKEKVALLKALWQYAEXXV >Z0495 sbcC, ATP-dependent dsDNA exonuclease MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAI CLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNR ARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRS MLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTEL EKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQQEQQSLNWLT RLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA EHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNT WLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALA AITLMLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ NVTLEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQL QAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALR GQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTAL AGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILET LPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKA QAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLV TQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQ QLKQDADNRQQQQTLLQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTL SGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDAL DALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK >Z0496 sbcD, ATP-dependent dsDNA exonuclease MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVF DTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFL NTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQ QHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIY IGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECG KSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLA SQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA >Z3170 sbmC, SbmC protein MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAV YYDNPDETPAEKLRCDTVVTVPNNFTLPENSEGVILTEISGGQYAVAVAR VVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYV AVQPKHH >Z0836 seqA, negative modulator of initiation of replication MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAPVTKEVR VASPAIVEAKPIKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYS LDAQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITN TNTGRKCSMIEHIMQSMQFPAELIEKVCGTI >Z4656 smf, hypothetical protein MVDTEIWLRLMSISSLYGDDMVRIAHWLARQSHIDAVVLQQTGLTLRQAQ RFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEG ELHALHSFQLAVVGSRAHSWYGERWGRLFCETLAKHGVTITSGLARGIDG VAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEQGGALVSEFPLD VPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFAL PGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPBAPENSFYS PDQEDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGW IAAVPGGYVRLRRACHVRRTNVFV >Z3859 srmB, ATP-dependent RNA helicase MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPT GTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELA KHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRA VETLIXDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFA ERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATR SIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAIS LVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLA KRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE >Z5658 ssb, single-strand DNA-binding protein MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMK EQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTT EVVVNVGGTMXMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSG GAQSRPQQSAPAAPSNEPPMDFDDDIPF >Z4974 tag, 3-methyladenine DNA glycosylase I MERCGWVSQDPLYIAYHDNEWGVPETDRKKLFEMICLEGQQAGLSWITVL KKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNAR AYLQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALK KRGFKFVGTTICYSFMQACGLVNDHVVGCCCYPGNKP >Z5361 tatD, hypothetical protein MEYRMFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQ KLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF NRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKL PGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAE KLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAA TTDANVKTLFGIAF >Z2536 topA, DNA topoisomerase I MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADS TSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLA EKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQA FNKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVA VRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVN KEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPE SPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVA CQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL PAVDKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASI ISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSL DQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGED AETNALRAKRRCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFR IKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTRKILRNGEVAP PKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVEEL YRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATG WSAFYVDGKWVEGKK >Z2796 topB, DNA topoisomerase III MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQ PDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRYLHEASEIVH AGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLR SNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQT PVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQ DEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIE AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNA ISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEA KVYNLISRQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAM TGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLIKKGRYIHS TDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY QLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEAGSG AIA >Z2993 tra8_2, IS30 transposase encoded within prophage CP-933T MSDFINNVSVDSIGQRNSYVKTWGCGGLELWKNGTGFSEIANILGSKPGT IFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNR SPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVL EKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNI QHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEG DLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSEL RKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQY FPKKTCLAQYTQHEDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD >Z3936 tra8_3, IS30 transposase MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPH ERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRG RRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISG WLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRR HTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIDSF F >Z1947 umuC, DNA polymerase IV MFALCDVNAFYASCETVFRPELWGKPVVVLSNNDGCVIARNAEAKALGVK MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN HAAKKWQRQTGGVVDLSNLXXQRKLMSALPVDDVWGIGRRISKKLDAMGI KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS RSFGERITDYTSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF FSQGVAQLNLFDDNAPRPGSEQLMAVMDTLNAKEGRGTLYFAGQGIQQQW QMKRAMLSPRYTTRSSDLLRVK >Z3864 ung, uracil-DNA glycosylase MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRF TELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIATPPSLLNMYKELENTI PGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVIS LINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGC NHFVLANQWLEQHGETPIDWMPVLPAESE >Z5657 uvrA, excinuclease ABC subunit A MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQ RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT ITEIHDYLRLLYARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLML LAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTI EVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSAN FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG SGKENIEFKYMNDRGDTSIRRHPFEXVLHNMERRYKETESSAVREELAKF ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML >Z0998 uvrB, excinuclease ABC subunit B MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIA NVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEA YVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGD PDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVI DIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYV TPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGM YRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYE LEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVL VGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKA ILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNL EFEEAAQIRDQLHQLRELFIAAS >Z3001 uvrC, excinuclease ABC subunit C MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTH TETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAK HAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIG RCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLE FEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIR QGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFN LSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQ QSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLR AEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQL AQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPP DSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQML LKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH >Z5330 uvrD, DNA-dependent ATPase I and helicase II MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVE NCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA HHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQK DEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELW LNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDD QSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAEC AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGE KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTW QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQV AFQGQGIKWLVAAYARLETV >Z3053 vsr, DNA mismatch endonuclease, patch repair protein MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP DFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRD ISRLQELGWRVLIVWECALRGREKLKDEALTERLEEWICGEGASAQIDTQ GIHLLA >Z5054 waaP, putative LPS biosynthesis enzyme MVWMVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSY FLKWHRGTTLKEIIKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAF GEKGMNPLTRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVA TMVHDMHAAGINHRDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRV PRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFAAPLKDILKQEQGLLS QAEAKATKIRERTIRKSL >Z5052 waaY, putative LPS biosynthesis protein MIYNKTINGVKVFIKDNDPFYEQVLNDFLTCRVKTLKVFRSIDDTKVILI DTARGPLVLKVYAPKHKMTERFLKSCIKKDYYENLIYQTDRVRGEGIQSI NDYFLLAERKTLNFAHYYIMLIEYIEGVGLNEYLEISEDLKDQLSESIKE LHQHGMVSGDPHKGNFIVSEKGLRLIDLSGKKTTAVLKAKDRIDLERHYN IKNELKDFGYTYLIFKKKIKKVIRDVKVKLGLKSK >Z3196 wbdQ, GDP-mannose mannosylhydrolase MFLHSQDFATIVRSTPLISIDLIVENEFGEILLGKRINRPAQGYWFVPGG RVLKDEKLQTAFERLTEIELGIRLPLSVGKFYGIWQHFYEDNSMGGDFST HYIVIAFLLKLQPNILKLPKSQHNAYCWLSRAKLINDDDVHYNCRAYFNN KTNDAIGLDNKDIICLMRQ >Z3215 wcaH, GDP-mannose mannosyl hydrolase MMFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPG GRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFT THYVVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASNDVHANSRAYFL AEKRAGVPGL >Z5328 xerC, tyrosine recombinase MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQNWQQ CDAAMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKG VSAPKTPRHLPKNIDVDDINRLLDIDINDPLAVRDRAMLEVMYGAGLRLS ELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNALSWIEHWLDLRDLFG SEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHM LESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >Z4232 xerD, tyrosine recombinase MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATA QSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHL ASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVS ELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWL LNGVSIDVLFPSQRAQQMTRQTLWHRIKHYAVLAGIDSEKLSPHVLRHAF ATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >Z4115 xni, exonuclease IX MRGLFPISHPAIACSSIECYPYRLIFKGVIVAVHLLIVDALNLIRRIHAV QGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGR PPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWG LAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLET HKEMAFLCRDIARLQTDLHIDGNLQQLRLVR >Z3773 xseA, exodeoxyribonuclease VII large subunit MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFT LKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYXPRGDYXIIVE SMQPAGEGLLQXKYEQLKAKLQAEGLFDLQYKKPLPSPAHCVGVITSKTG AALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQCNECDV LIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVAD LRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIH HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQ QNPQPKIHRAQTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLS TLARGYSVTTATDGKVLKKVKQVKAGEMLTTRLEDGWVESEVKNIQPVKK SRKKVH >Z0525 xseB, exodeoxyribonuclease VII small subunit MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQ AKLQQAEQRVQILLSDNEDASLTPFTPDNE >Z2781 xthA, exonuclease III MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKL GYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDEEEAQRRIIMAEIPSPL GNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRENPVLIMG DMNISPGDLDIGIGEENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFR HANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEI RSMEKPSDHAPVWATFRR >Z0127 yacH, hypothetical protein MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVETQSTQLAVSDA AAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMAS TYPTNVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALM GENPQWVQNLGDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKVITTT KKTVPVTQTVTAPVIPSNTVSTANPVITEPATTVISIEPGNPDVVYIPNY NPTVVYGNWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS IDWDDDDHDHHHHDDDNYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITG EHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTR DSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS RRQPLTQQQKDAARQRYQSASPEQRQAVHEKMQTNPQNQQRREAARERIQ PASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRP LNQQQRDNARQRVQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQR SAVRERLSERGARRLER >Z0288 yafM, hypothetical protein MSEYRRYYIKGGTWFFTVNLRNRRSHLLTAQFQMLRNAIINVKRDRPFEI NAWVVLPEHMHCIWTLPESDDDFSSRWREIKKQFTHACGLKNIWQPRF >Z0549 ybaV, hypothetical protein MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQNKAAV PAKASDEEGSRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTV EDLKQVPGMGNSLVERNLAVLTL >Z0566 ybaZ, hypothetical protein MRLHSGVFPDYAEKLSQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVA KLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQA LLAEGVMVSGSGQIDLQRYRWNY >Z1110 ybjD, hypothetical protein MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPES DLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACW TPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQAHHL VRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNL SDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDII NRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWR LGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQC GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNL RKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGR AD >Z1238 ycaJ, putative polynucleotide enzyme MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL HSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQ NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELN SALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAI AELVNGDARRALNTLEMMADMAEVDDSGKRVLXPELLTEIAGERSARFDN KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYA AGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR >Z1739 ycfH, hypothetical protein MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHM RDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYY YTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDC GGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRL LVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNF ARLFHIDASRLQSIR >Z2856 yeaB, hypothetical protein MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQ RSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGV LPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYH PLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP >Z3443 yejH, putative ATP-dependent helicase MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARG RVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSV ARNLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLT ATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPE RLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAA TRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTD CLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTAD GTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDED GADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALL RHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG >Z3509 yfaO, hypothetical protein MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEPGERIEEAL RREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVS ANREVKINEEFQDYAWVKPEDLAHYDLNVATRKTLRLKGLL >Z3723 yffH, hypothetical protein MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATI LLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKE AIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVED EDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQMSHLID >Z3895 yfiL, hypothetical protein MKTIRYALKKEKEMMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVG MEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSG KSFPASCNNVENASQLHEVWQKGADENASAIRLN >Z4147 ygdP, dinucleoside polyphosphate hydrolase MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAM YRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWF LLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKE FASVVMSLQENTPKPQNASAYRRKRG >Z4421 ygjF, hypothetical protein MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDHQ LKPQEAQHLLDYRCGVTKLVDRPTVQANEISKQELHAGGRKLIEKIEDYQ PQALAILGKQAYEQGFSQRGAQWGKQTLSIGSTQIWVLPNPSGLSRVSLE KLVEAYRELDQALVVRGR >Z4516 yhbQ, hypothetical protein MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAF SAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAKLLSSLQTPEIKSD >Z4622 yhdJ, putative methyltransferase MTMRTGCEPTRFGNEAKTIIHGDALAELKKLPTESVDLIFADPPYNIGKN FDGLIEAWKEDLFIDWLLEVIAECHRVLKKQGSMYIMNSTENMPFIDLQC RKLFTIKSRIVWSYDSSGVQAKKHYGSMYEPILMMVKDAKNYTFNGDAIL VEAKTGSQRALIDYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQ KPEALLKRIILASSNPGDIVLDPFAGSFTTGAVAIASGRKFIGIEINSEY IKMGLRRLDVASHYSAEELAKVKKRKTGNLSKRSRLSEVDPDLITK >Z4839 yhhF, hypothetical protein MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA GNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLAD ETLIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD >Z5073 yicF, DNA ligase MKMKVWMAILISILCWQSSVWAVCPAWSPARAQEEIFRLQQQIKQWDDDY WKEGKSEVEDGVYDQLSARLTQWQRCFVSEPRDVMMPPLNGAVMHPVAHT GVRKMADKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNG LKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA RAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMTDRLKELATAGFTLTQ RYTRAVKNADEVARVRNEWWKAKLPFVTDGVVVRXAKEPESRHWLPGQAE WLVAWKYQPVAQVAKVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFN SLTCYFASDVCQEQFISRLVWLGSKQVLGLDGIGEAGWRALHQTHRFEHI FSWLLLTPEQLQNTPGIAKSKSAQLWHRFNLARKQPFTRWVMAMGIPLTR AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS WLAAQQITGFEP >Z5980 yjjV, hypothetical protein MQALAENYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGES GLDLFGDDPQFERQQWFLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRH DLSRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRVVIAKLP LASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCELRPEPEDEIAEVL LNNTYRCLTFVGSLPXVGSIRQSAHNA >Z4294 yqgF, Holliday junction resolvase-like protein MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLK EWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST VEARSGLFEQGGYRALNKGKIDSASAVIILESYFEQGY >Z4391 yqiE, hypothetical protein MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVR REIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIE EGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDA TTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLH HQALKNEWA >Z4507 yraN, hypothetical protein MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVNERGGEI DLIMREGRTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHN GSFDTVDCRFDVVAFTGNEVEWIKDTFNDHS >Z4654 yrdD, putative DNA topoisomerase MRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKV LEGQVCPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDETAITCPQ CRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEK KTAQGVKHFCASKQCGKPVSAE >Z4751 yrfE, hypothetical protein MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAV MIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVFEAANRELKEEV GFGANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRW PLAHMMDLLEDPDFNEARNVSALFLVREWLKGQGRV