Gene list
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COG category: Replication, recombination and repair
Gene type: CDS
Gene type: CDS
Genomic element: pHCM1
Number of genes found: 31
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | HCM1.59 | putative DNA modification methylase | SubName: Full=Putative DNA modification methylase; | pHCM1 | CDS | 37651 | 825 | + | 0.476364 |
NA | HCM1.134c | putative recombinase | SubName: Full=Putative recombinase; SubName: Full=Uncharacterized protein; | pHCM1 | CDS | 104515 | 1182 | - | 0.50423 |
NA | HCM1.211c.2N | putative transposase | pHCM1 | CDS | 159691 | 717 | + | 0.532775 | |
NA | HCM1.162c | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 119023 | 765 | - | 0.610458 |
NA | HCM1.209c | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 156075 | 1005 | - | 0.481592 |
NA | HCM1.103 | putative DNA helicase | SubName: Full=Putative DNA helicase; | pHCM1 | CDS | 78416 | 2040 | + | 0.504902 |
NA | HCM1.249c | transposase | SubName: Full=Putative transposase; SubName: Full=Transposase; | pHCM1 | CDS | 183230 | 1209 | - | 0.450786 |
NA | HCM1.57c | hypothetical protein | SubName: Full=Uncharacterized protein; | pHCM1 | CDS | 34194 | 1755 | - | 0.501994 |
NA | HCM1.187c | putative DNA modification methylase | RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; | pHCM1 | CDS | 137517 | 1428 | - | 0.489496 |
NA | HCM1.188 | putative nuclease | SubName: Full=Putative nuclease; | pHCM1 | CDS | 139168 | 516 | + | 0.484496 |
NA | HCM1.236 | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 175403 | 1005 | + | 0.490547 |
NA | HCM1.201 | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 151052 | 1398 | + | 0.528612 |
NA | HCM1.219 | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 163369 | 705 | + | 0.531915 |
NA | HCM1.213c | putative transposase | SubName: Full=Putative transposase; | pHCM1 | CDS | 160707 | 705 | - | 0.530496 |
NA | HCM1.194 | transposase | SubName: Full=Putative transposase; SubName: Full=Transposase; | pHCM1 | CDS | 143085 | 1209 | + | 0.450786 |
insA | HCM1.136 | putative IS1 transposase | SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 106430 | 276 | + | 0.528986 |
insA | HCM1.138 | putative IS1 transposase | SubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 108842 | 276 | + | 0.532609 |
insA | HCM1.05c | putative IS1 transposase | RecName: Full=Insertion element IS1 protein InsA; | pHCM1 | CDS | 2265 | 276 | - | 0.528986 |
insA | HCM1.239c | putative IS1 transposase | SubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 177180 | 276 | - | 0.536232 |
insA | HCM1.205c | putative IS1 transposase | SubName: Full=IS1 transposase; SubName: Full=Insertion element IS1 protein; SubName: Full=Insertion element IS1 protein InsA; SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 153973 | 276 | - | 0.536232 |
insB | HCM1.04c | putative IS1 transposase | SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 1876 | 471 | - | 0.545648 |
insB | HCM1.238c | putative IS1 transposase | SubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 176758 | 504 | - | 0.551587 |
insB | HCM1.204c | putative IS1 transposase | SubName: Full=Insertion element IS1 protein InsB; SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 153551 | 504 | - | 0.551587 |
insB | HCM1.139 | putative IS1 transposase | SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 109036 | 504 | + | 0.545635 |
insB | HCM1.136a | putative IS1 transposase | SubName: Full=Putative IS1 transposase; | pHCM1 | CDS | 106624 | 504 | + | 0.547619 |
int | HCM1.167 | putative integrase | RecName: Full=Integrase/recombinase; AltName: Full=E2 protein; | pHCM1 | CDS | 121046 | 1014 | + | 0.61144 |
mucB | HCM1.253 | putative DNA-repair modulator | SubName: Full=Putative DNA-repair modulator; | pHCM1 | CDS | 186216 | 1260 | + | 0.525397 |
rep | HCM1.137 | putative replication initiation protein | RecName: Full=Replication initiation protein; Short=Protein E; Short=Protein rep; | pHCM1 | CDS | 107709 | 756 | + | 0.480159 |
tnpA | HCM1.169 | transposase | SubName: Full=Transposase; | pHCM1 | CDS | 122925 | 2973 | + | 0.60444 |
tnpR | HCM1.168 | resolvase | SubName: Full=Resolvase; | pHCM1 | CDS | 122365 | 558 | + | 0.611111 |
trhI | HCM1.107 | putative DNA helicase | pHCM1 | CDS | 82288 | 1785 | + | 0.442017 |