Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Gene type: CDS
Genomic element: pHCM1
Number of genes found: 12
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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 >HCM1.248 putative transcriptional regulator ATGAAATTAAGACATCTCGATATCTTTTATGCTGTAATGACTTGTGGTTC CTTAACGCGTGCGGCTGAAGTTTTACATATTTCTCAACCCGCGGCGAGTA AAGCACTCAAACATGCTGAGCACTGA >HCM1.87 putative plasmid partition protein ATGAGTGATGAGCAGCATATCGGGAACGACAAATCCCGTTATATTAATGC GCCTAAGCGTACTGAAGTAATCCATCGCTCCGGGCTTCAAGGCCTGAAAG GTCAGCCACGCCTGAAGAAACTTTTTACATTACACAATGGGCGGAAGCTT GAGGCGGAACACATCATTGTTCCGGCGGAAAAGGTGGAACTGGAAACCAC AGTACACCCTCTGAACCCACGAAATCAGGAGGCTCTTTCTGTAAATGCAG TAAGAGATATTCTGAAGGACATTGAAGCAAGAGGTGTTGATACTGAGGGC GTTGCAGTTAAGCGGAACGGAGTGTATCTGCTAATAGAAGGTAGCCGCAG GCGTTTCTGTTGCATTCAATCAGCAAAAGAATTGCCATTATGGGTTTTGC CTGATGATGTTAACGCAGATGATATTAATTCCATCATATCAGCAACACAA ACTTCTCGACGCTTTTCATATCGTGAAGTAGGTTTAAAGTATTTAAGGGA AATGGAAGAGCATGGATTTGTTACCAATGAAGAGCTTGCAAACTATCATG GTATCAGTCACGTGTCCGTCTCTAAGCGAGTTCAGGCTGCAAAGATTAAC AGCACTCTTATTGCACTGTTTCCTGACTATGAAGCTATTCCGAATTCTTA TTACAATCGCCTATTCCGACTTCAAAAATATATAGAGAAGAATTTATTTT CTCTTGAAGAAGTTGTTGAGAATACACGTGAGGAAATTCGAGATCTGGAT ATTTCTGATATTGCTGAAGCACAGAAAACCGTAATGGAGAAGATTACAAC GGTAGTTGAAAAACTTGATATTAAACCACCTAGCAAAGGTTGGGATACAC GTGAATTGGCAACTTTTACTAATAAAGATAAATATGCAAGAATTAGCAAA AGTTCCTCGGGGCGTAAAATCCGTTTTGAGTTTAATAGAATGAACCGAGA ATTAATTGACGAAATTGAGAAGTTTATAAAATCAAAACTGAGCGAAATGA ATAATTAA >HCM1.207c hypothetical protein ATGAAGGATTATCTCTGTAAAAAGTTATTCAACCGGCTTTCCGGTACCCT GGTGATCAGAGCGCGCTGCGGCAATAACATTACTGGCCTGGCATGTTGCA ATATTCTTTATCCCTCGCCCCGATACAGCGGTCAGCTGCATATTAAAGAG CTGTATGTTTCTCAGTGCGATCGAAATAAGGGCACGGGTAAAGCGATAAT GCGCTTTATAGCCCGGCTTGCGCTTGAACAGGAATGCCTTAGCCTTAGCT GGAACGCTGAAAAATCCAACCCCGGCGCTAACCGTTTTTATCAGGCTCTG GGAGGCAGAATAAATGATCATATCGTCAATTATTACCTCCACGGGGAGAG CCTGAGCAAACTGGCCTCAGGCATTTGA >HCM1.244c putative transcriptional regulator ATGGCTAATTTAATACGAAAAGAGGTTACCTTTGAGTCCTCAATAGCCGC GATAGGGGCGGCTATGTCTGACATTTCACGAGTTAAAATACTCAGTGCTT TGATGGATGGGCGAGCTTGGACGGCCACTGAGCTAAGTTCTGTGGCGAAT ATATCAGCTTCAACGGCGAGCAGTCATTTATCTAAATTATTAGATTGCCA GCTAATCACAGTAGTAGCTCAAGGCAAGCATCGTTATTTTCGGCTAGCAG GAAAAGATATTGCTGAATTGATGGAAAGTATGATGGGGATCTCCTTAAAC CATGGCGTACATGCCAGAGTTTCCACGCCAGTGCATTTACGAAAAGCACG TACTTGCTATGATCATTTAGCTGGCGAAGTTGCCGTTAAGATCTATGATT CCCTTTGTCAACAGCAATGGATCACTGAAAATGGTTCAATGATCACATTA AGTGGTATTCAATATTTTCATGAAATGGGAATTGACGTTCCTTCCAAACA TTCACGTAAAATCTGTTGTGCGTGTTTAGATTGGAGTGAACGCCGTTTCC ATTTAGGTGGGTACGTTGGAGCCGCATTATTTTCGCTTTATGAATCTAAA GGGTGGTTAACTCGACATCTTGGTTACCGTGAAGTTACCATCACGGAAAA AGGTTATGCTGCTTTTAAGACCCACTTTCACATTTAA >HCM1.63c hypothetical protein ATGAATCACTGCGACTATCAGATTATTGAGATCAGTCCTAAAGCACTTTT TATCGAATCTGGATTCAATCCACGTGAAGCGGTAATTGGTGAACTTTGTT ATGAACAGGAACCAGTAAAATCGACCATTGTTTCTATTAAACAAGCCTAT AAAGAGGGCAGACGAGTCGATTTAATTAAGGTTGTTAAGAAAGACTCCAA TTACGTTGTAAGGCAGGGGCATTGCCGTTACAGAGCACTATCTCTTGCTC TTGCGGAAGGAGCTGATATTCAGCTCATTTCAGTAGTTGTTATGAACTAT AAGAATAAAAGTGAAGAATACCTGGAGAACCTTGATGGGAATAGGAATAA CGGTCTTAATCCCGTAGCCTTAGCTTATGCACTGGCAGAGGCGCTGAAGC TTGGCTCTACCGTTGAATCCCTTGCTATGCGCTATCAACGGTCTAGCACT GCTATTCGTAACCAGCTTAAAATCCTTGATATGCCTTTAGAACTACAACG TTTAATCAGTCTAAACCTGATTAAAAAAACACTCGCGATTGAGATCATGT TGAAGTATTCCAATGACCATGCAAAAGTCCTTGCACATTTGGAATCGTGT TCTCTTTTAGTACCATCAACTGAACCAGAACCTGTTTTATCTAAGACATC AAGCGTTCAAACATCATCAAACGATGAGAAACTAGATAACCCGGAAACAC TCCCTGTTCATGTTATTCCTAAGGAAGTTAAAACAAAATCCATCACTCGC AGTTCATTGGGTATTAAACGGCTTTCTCATAAAAAAACTGAACGCTTAAA AACTGAATTTATCGGGCTGATTGATACTGTACGGCCAGCACTAAACGACA GTAATAAACTCACCGAATTAATTTTCGACGGACAACATTCCAATTTATTT ACGAACATCAGCAGCACTTCCATCACAAAGACAACGGAAAGTGTAAAGAT CACTCTAGATGAAGCAAAACTCCAGCTTTTATTAAGCCTTCTGAATGATG AAAATACTGCTATCATCATTCCAAAATCTAAGGTTACAGAACTGCATGAA ATTCGTGACCTGTTAACAAGTGAGTAG >HCM1.58c putative DNA-binding protein ATGAGTGATCTGATGACTGATTCCCAACAGCAAACTAACTCACGGGTCTT TAAATCCCCACTCGTGTCTTTTTCAACAGTGACCGGTTCCGGCCGATTCG TCAGTGGTATGAAGCAGTTCCGCGACGCGAACCCTGACCTTTGTAATGAA GTCACTGAACAGAAAGCATGGGCTATCAGCCCAACCGTGGTTCAAATCAC GGAAGGATTCAACTCCCGTGAGATGGGAATGGGGGAAGCTTATTACCAGT TGCCAGAAGTCGCCGATCATCTCAATAACATCAAGAATGCGTACATCCGG GGTGATTACGTAGACCCTATCCGCGTTCTGATCAAAGACGGCATTCCGTA CGTTCGCCAGGGACATTGCCGTTTAAAGGCTGCTTTGATGGCTGTGGCAG AAGGGCATTCTAACCTCACCATTCTTTGCATCGAGATGAAAGCCGATGAG ATCAGCTGCGAATTGACAACGATTGACGGAAACCGTGGCCTGGCTCTTTC TCCTGTGGCTTTGGGTGAATCCTACCGACGTCTTCAGGCGCTGGGTGGAT GGTCGCTTGACCGTATTGCCGAACGTGAGGGAAAAAGTAATACCACAATT GCTGCTCTTATTCGTTTAACCGGCTGCTGTGTCTATCTCAAAAAACTGAT CCATGCCGATGCCATTTCCTATGTAGCAGTCCTGTCCCTTATCGATGAGT TCGGTGAAACGGAAGCTGTTGCGCGGATCGAAAAGATGATCGCAGACCTT GAAAAGGCTGATTCAAGCGGTATCCAGATTAAGAAAACGCCACGCGGGCA GATCCGTGTTGTCCCTTCCGATTTTAAACCCGCACGTGTTCCACCAGTTC TCGCTACAAAAGCCGTCGAAGGGGTCAAACTCATTACGACGAGTCTATTG CAGAAACTCGGTGATATCGAGTTGCCGGAGGTGACCGACTCCAGCGAAGA TGAAGAAATTACCTTTACGCTGAACCGGAGCATGCTGGAGATGCTCAAGA ACCTGCAAAGTGAGATTACGGAATCAGAAAACAAGCAGCTTCGCCGGGCC GAAAATCGGCAAGCCCGATTGAAAGGGGAAAAAGTGACTTACAAAACCAA GAAAAACGATAAAAATGGCGGAGAACCGCAATCCGAAACACCCCCAGCAC AGGCTTAA >HCM1.159 merD, putative mercuric resistance operon coregulator ATGAGCGCCTACACAGTGTCCCGGCTGGCCCTTGATGCCGGGGTGAGCGT GCATATCGTGCGCGACTACCTGCTGCGCGGATTGCTACGGCCGGTCGCGT ACACCACGGGCGGCTACGGCTTGTTCGATGACACCGCGTTGCAACGGCTG CGCTTTGTACGGGCTGCCTTCGAAGCGGGTATCGGCCTGGACGCACTGGC GCGGCTGTGCCGGGCGCTGGATGCTGCGGACGGTGACGGTGCGTCTGCGC AGCTTGCCGTGTTGCGGCAACTCGTCGAGCGTCGGCGCGAGGCCCTGGCC AGCCTCGAAATGCAACTGGCCGCCATGCCAACCGAACCGGCACAGCACGC GGAGAGTCTGCCATGA >HCM1.230c merD, putative mercuric resistance operon coregulator ATGAGCGCCTACACGGTATCGCAACTGGCCCATAACGCTGGGGTGAGCGT ACATATCGTGCGCGACTACCTGGTGCGCGGCTTGTTACGGCCGGTGGCCT GCACCACGGGCGGCTACGGCGTGTTCGACGATGCGGCCTTGCAACGGCTG TGCTTCGTGCGCGCGGCCTTCGAGGCGGGTATCGGCCTGGATGCCCTGGC GCGGCTGTGCCGTGCGCTCGACGCAGCGGACGGCGCACAAGCCGCAGCGC AGCTTGCCGTGCTGCGCCAGTTGGTCGAGCGGCGGCGCGCGGCGTTGGCC CATCTGGACGCGCAACTGGCCTCCATGCCAGCCGAGCGGGCGCACGAGGA GGCATTGCCGTGA >HCM1.235 merR, putative mercuric resistance operon regulatory protein ATGGAAAATAATTTGGAAAACCTGACCATTGGCGTTTTTGCCAAGGCGGC CGGGGTCAACGTGGAGACAATCCGCTTCTATCAGCGCAAGGGCCTGTTGC GGGAACCGGACAAGCCTTACGGCAGCATCCGCCGCTATGGGGAGGCGGAC GTGGTTCGGGTGAAATTCGTGAAATCGGCACAGCGGCTGGGGTTCAGTCT GGACGAGATTGCCGAGCTGTTGCGGCTCGACGATGGCACCCACTGCGAGG AGGCCAGCAGCCTGGCCGAACACAAGCTCAAGGACGTGCGCGAGAAGATG GCCGACTTGGCGCGCATGGAAACCGTGCTGTCTGAACTCGTGTGCGCCTG CCATGCACGAAAGGGGAATGTTTCCTGCCCGTTGATCGCGTCACTACAGG GCGAAGCAGGCCTGGCAAGGTCAGCTATGCCTTAG >HCM1.151c merR, putative mercuric resistance operon regulatory protein ATGCAAATTAATTTTGAGAATCTGACCATTGGCGTTTTTGCCAAGGCGGC CGGGGTCAATGTGGAGACCATCCGGTTCTACCAGCGCAAGGGCCTGCTGC CGGAGCCAGACAAGCCCTATGGCAGCATTCGCCGCTATGGCGAGGCGGAT GTAACACGAGTGCGGTTCGTGAAATCGGCCCAGCGGCTGGGCTTTAGCCT GGACGAAATCGCCGAGCTACTGCGGCTGGAGGATGGCACCCATTGCGAGG AAGCCAGCGGCCTGGCCGAGCACAAGCTCAAGGATGTGCGCGAGAAGATG GCCGACTTGGCACGCATGGAGGCCGTGCTGTCTGAACTGGTGTGCGCCTG CCATGCGCGGAAAGGGAACGTTTTCTGCCCGCTGATTGCGTCACTGCAAG ACGGAACGAAGCTCGCTGCATCGGCGCGGGGGAGTCACGGGGTGACTACG CCTTAG >HCM1.252 mucA, putative DNA-repair modulator ATGTCTGTATTCCCTGAACGTTTTGCATCCCCTCCTCGTGATACAACCCC TTTTTTCAGTGACCTACTGAGTTGCGGGGTGATGAGTCCGTGCGCCGGAC ACGAAGACAATGAGCTGAATTTACATGATTTTGTGGTTCGTAATCGCCCC GCGACTTTCTTTGTCAGGGCCTCAGGTCTCAGCATGGTAGACGCCGGAAT AAACGACGGCGCCATACTGGTTGTGGATCGGTCACTGACTGCGGAGCACG GCTCAATCGTCGTTGCGCTGGTTGACGGCGAGTTTACCGTGAAGATTTTG CAGACCTTCCCGAAACTGATGTTGATGCCCTCCAACCCCGCCTTCAAGCC GATACCTGTTAACCCGGACACTCTTGAAATCTGGGGCGTTGTCACCTTTG CGTTGAATCAGTTTCCTCATGTACATGCACGTTGA >HCM1.243 tetR, tetracycline repressor protein ATGATGTCTAGATTAGATAAAAGTAAAGTGATTAACAGCGCATTAGAGCT GCTTAATGAGGTCGGAATCGAAGGTTTAACAACCCGTAAACTCGCCCAGA AGCTAGGTGTAGAGCAGCCTACATTGTATTGGCATGTAAAAAATAAGCGG GCTTTGCTCGACGCCTTAGCCATTGAGATGTTAGATAGGCACCATACTCA CTTTTGCCCTTTAGAAGGGGAAAGCTGGCAAGATTTTTTACGTAATAACG CTAAAAGTTTTAGATGTGCTTTACTAAGTCATCGCGATGGAGCAAAAGTA CATTTAGGTACACGGCCTACAGAAAAACAGTATGAAACTCTCGAAAATCA ATTAGCCTTTTTATGCCAACAAGGTTTTTCACTAGAGAATGCATTATATG CACTCAGCGCTGTGGGGCATTTTACTTTAGGTTGCGTATTGGAAGATCAA GAGCATCAAGTCGCTAAAGAAGAAAGGGAAACACCTACTACTGATAGTAT GCCGCCATTATTACGACAAGCTATCGAATTATTTGATCACCAAGGTGCAG AGCCAGCCTTCTTATTCGGCCTTGAATTGATCATATGCGGATTAGAAAAA CAACTTAAATGTGAAAGTGGGTCTTAA