Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Gene type: CDS
Gene type: CDS
Genomic element: chromosome
Number of genes found: 246
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Yersinia pestis CO92, CO92 >YPO2845 putative GntR-family regulatory protein MRSLLSDLLLQRLTPATLSTVPVAKNKRLYRALRLSILDGSIRAGSRLPA SRDLAQELEISRNTVLAAYDQLQAEGYIQTRTGGGTFVTTDLPEDGLNKM DTLPQHSGPEPDVALSTRATHLLNHCGVASYQWGTFMPGVPDVRLFPHEV WRKLQTRLSRHLNPENLTYSVHGGCPQLQQALADYLRIARSVSCTPDQIL ITAGTHQALDLLAKMLCDPGDHAWIEEPSYWGIRNVLTINGIEVIPVSVD ENGMDPLDLPFESRSPRLICVTPSHQYPLGSVMSLTRRQRILALAQQHNC WVVEDDYDSEFRFSGSPIPALQGLIPDAPVIYLGTFSKTLYPGMRISYMV LPRPLAQQFKVAHSELYRGGNGMMQLTLAEFIREGHYASHIRRMRLIYGK RRAALVGMIKQQLGGSFLAEYGNAGLHLILALPESIDDVALSAELEQKGV LVRALSGYYLKSPPRRGLLLGYGCVPEEAMEAVFAPIVSYLRRRINPDDA I >YPO0831 DeoR-family regulatory protein MKAAIERRMEIFNIVTQQGKARVEDLAERFNVSSVTIRSDLSFLEKNGYI VRSHGSAIPNTGVIAELTVHEKRRRNSGVKSLIGQAAAKLINSGDTVILD SGTTTREIAANLRSVENVVVMTNGLDVAMELASAPGVEVLISGGVLRKSA MSFSGSQAEASLKNFRFDKVFLGVDGFDLRVGITTYNEQEASLNRLMCDI SEQIIAVADSTKFGKRSCHMIREFGDIDILVTDSDIPEEYVQRLRDMRIE VIIAEKEK >YPO2150 LysR-family transcriptional regulatory protein MHDLNDLYYYAEVVEHGGFSAAARVLGLPKSKLSRRLALLEERLGVRLIQ RSTRRFAVTDVGRTYYEHCKAMIEEARAAQESIDLTRAEPRGVVRITCPV ALLQATVSTMLADFMASCPLVTIHLEATNRQVDPVAEAIDIAIRVRPPPL QNSDLVLRVLGNRCQCLVASPELIGRQGEVNTPVDLTGWPSLGLGQPQQT FIWNLEGPEKAHAAVYHQPRLVTADMNTLRSAALAGVGVVQLPLMMVTEQ LAEGTLVRLLPDWSVRHEIIHAVYPSRRGLLPSVRSVLDYLVQRFSQLDE R >YPO2498 putative LacI-family transcriptional regulatory protein MSKAYSNATIVDIARRANVTNITVSRTFNQPGLVKQETREKIHAIAKELN YVPNAFAQGLKRSSSQIIGIVTSSMYNPFYSELIQTVSRIARTQCYQIML FDTDGSEEAEMEAIQALFGYKACGILLSPVRDDKNYQPAYLDLAETYRVP LILIDRDIYNRQLSGVFLNNKEIGLLAGKYLSEQPERKMLIIGGPAESEI TRVRIEGIINALENKKNDVHIINGDYDFISQEAAVRDYLSVPQNQPDYII GLNGILTLGAIAICHELKIYNNIKFFSIDEPPKAADYGLHIAGVYHDTQM LGEIAAELLFNAIKKPHNDQAVRREFFTGSLLTH >YPO0758 LacI-family regulatory protein MSHIAAKAGVSQSTVSLVLNGSYSIKLADDTREKVLRIAQEMGYVHKAVE RPIARDKIALIINGLINHDPFIEAISAVQQAAWQHNKLLAIFDQENEPEH CAALEEEICRGGYQGVIYASCMTSQLAPMFRNLSIPMVMLNGYCPELPDV PCILPADKIGAYKATSHLLQQGYKRIAILAGELWMDAANDRISGYRQALI NHDICPDEGYIQVTNWSLKEAYKKTLELLALTARPEAIFCSSDYIALGCY QAILSQGLRIPDDIAVVGYDNQSISSELSPELSSVNLPYGEMGEMALHTL LNITQQQPLLSLKMKVEGELVIRQSSIRPEK >YPO2568 LacI-family transcriptional regulatory protein MEKIRKRRNTGRVTLQEVADYAGVGSMTVSRALRTPEQVSDKLREKIEQA VEKLGYIPNRAAGALASGHSDTVAVLIPSLTDKASSRFMQALQQILNKNE FQLLLGCHEYNQRKEAEILMTLLQSHPAAVVIFGSQLADKTYQILERTNI PIVNVVGSYFKGAKITLEAAFFESAYELTRHLLERGYQHIGYLGAHRDNQ LQRQQLNGWHKSMLEHYKNADQTVTTPDAASLQFGRYALTEILLRQPELD AVICSHEDIALGVLFECQRRLLKIPSGIAVACLDGSESCDQTHPTLTSMR IDYKKMGKEAGKMLIDMLNEDDAGVKSVPLSQSFNYKFEPRQST >YPO3978 putative regulatory protein MPTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEG AVLALTENRMVMIDEAVAGRLKGVKPGINLPIIFRQRMVGVIGISGEPDK VQAYAELVRMAAELILEQAEMLEQNQWEKRYREQLTSQLIAQQGSAASVA SMAAYLGLDLTLPRIALIVSLREQEHTQQRDLVEILSNHSRETLVTLHGF ERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNIYVGGIFDGLD GLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELS SAWQTLRQADTKDVLCHTLRCYFVQNCDLSQTSKQLHIHVNTLRYRLQKI EAITALKINELSSIIQLYIGMKIER >YPO0679 AraC-family regulatory protein MVDVIDIQAQMADKIARLAQGDGLTPSTVSGVKILYSTVHQPRTPVMYTP SVVIIFQGHKVGYLGSKVFQYDPKNYLILSVPLPFECETFASPEIPLAGI SIQVDSQMLQDLMMTMGDDELEKPPGNTSGVNSAPLTEEMLCATERLLDV MSIARDARVLGPQIVREILYYVLCGSCGGALQALVNRHGHFNQITKTLRR IENHFADNLSVEQLAAEVNMSVSAFHHNFKAVTNTSPLQYLKSYRLHRAR MMMLHDGLKASTAAIKVGYESASQFSREFKRYFGHTPSEGVAKQRIN >YPO2093 hypothetical protein MNTQLSFRNTQFDIANHSGQIWLRGTEIAKALGMEKSDAVSQIYNRNSDE FTEAMTLTLKLSVKGFGNGKSAKDVRVFSLRGAHLIAMFARTEIAKEFRK WVLDILDKEVGNTPPVITPVTKVPAELKSRYRVRVIIYDEMFGNCLELIG KADTFRTIASGIATDLGFKPTGFVAVQMDSSKFKRIY >YPO2926 putative RpiR-family transcriptional regulatory protein MSSLLRIRQIYSTLAQNDRKLADFLLINPEQARHLSSQKLAQQTGVSQSA VVKFAQKLGYKGFPALKLALSEVVAMPKAVTLHNQILSTDSLKTIGEKLL NEKTAALRATLDINSEQRLIQGLGMLRAAQKVLLIGIGASGLVAKDLAYK LLKIGIVAISETDMHVQLAAAQALGEQGLLLAISFSGERREINLAAEEAQ YCGTKVLALTRFSPNSLQQRADHCLYTISEEPVIRSAAISSSTAQYALTD LLFMAMIQQDIENAQDHIKHSAALIKKLI >YPO1891 hypothetical protein MAMAMAHSTKPAGAVTQAIADIRMVLDIEEVVVNESVGLTDGMLDRVRKS LQAFPARFNLPVTPMLGGGTYRMTECCQRSSASVRRVHDRPGVMSR >YPO2955 putative luxR-family regulatory protein MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRDSNNANVI FKDLMVIVNIYQENSFIQKNNSNNNKPMMTVNIPFNSSQLGLYDVISKIK KILNIARLNYNMMMKSDLQRRIGLKNYIQLSMTESKVVQLTGKGHSTTDI SKILDRSEKTILTHRRNAIRKLGMFNRLEFYKYASLMRNYSNKDAVFICL >YPO0401 putative transcriptional regulator MTIKLISQLTALVSEPNSIHHVYFAKSLRAAPLLAQQVNFPRMELIIEGS QAMIWDRLYDDFHHKDEYIMHRGDILFIPSGGWNIPQWEQPVITLSILFG KQSLGFSLLSWDGESVVHKEMESVLRRGPRVGAYILQALNEMSLMQREQT TVQLIVRSLISHCIDLLRNQVKTPSRSQTLFESIREYIERNYSEPLTRES VAHVFHISPNYLSHLFRNAGNIGFNESVNSARLENAKILLKFYEMKIKEV ANVCGFIDSNYFCRLFRKETELTPSEYRQQYRSNMMERDVI >YPO3612 putative transcriptional regulatory protein MTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKY ESGMHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALS QCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK >YPO0804 putative regulatory membrane protein MNTIVINDVFFTPQKRTIDRNGKVTKIRNKESELLSLLCEYYPEPISRED IEKRLWEGSYVTDNTLTQTISNLRHALDDKKHELVVTIPKKGYRIGIKPE IFIEGEVQCQPYEKLGIIGSSVDKMAMSFLKGKMSFYRVCLFVLGVIFFF IFFNVALYRYQVKLVDVNSLPILINLDKEQDKTFLSVYQQHPYVLLKKKK MAAMLFVNARETSWYAKKIIYSILFSILLGGGGGQLLV >YPO0288 hypothetical protein MLLSTKQFRHYTLALLLASGKPVDADDIYDKLSCSGPTLTRALKELRETY NAEIRYSKSTHSYQLTEKGTLTPKVLRHIKDAIASHMIIKSHEELVASHV ILDKEKKRSISLSLRMSVIRKIDRVVNQLEITRSEAVEILVNTYISELML SVSQPPKGKKSV >YPO1810 putative transcriptional regulatory protein MKNRVTESSKGTALHLNPMVSAAWLYYEDQLKQSDIAEILGVSRATVINY LNEARLRGIVEIKISDEHLASMRLAQAIMREFGLERCIVIPDDQGQRPTA LRVGEAGAQLLSSLIAPNDVLGVSWGQTVLALSHAITRHPVADLTVIQIT GSMHSTYEFSPELCTSNIADRYRARCINLHAPFLLSRPEIKEMLCNEPAL MPQLALLNTCTKIVFGVGNTAADSTIFSSNTVTYAAVEPYRQQGAVAIIA GRYIDATGAPIYDHLDDRMIGLTIDEIDQIPVRICVAGGLNKVEAIRATL KGQHATVLVTDEVTACALMTRAKTP >YPO3619 putative araC-family transcriptional regulatory protein MACHDEPGYSLNFCHQHRVGRMEKNMQRTQVVANWYRESDEFSTLVNYRI LRAGHIRAADNFHVRRQSVAGHELIFCLNGSGFIRLENNLHEVKKGNLAW LPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQQPVFEFTSPE TITDIYHRLFDLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVIS HRGLGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQETFNQSPLRW LKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDF RRQERQLDNDRHD >YPO4034 putative AraC-family transcriptional regulatory protein MFEKRYRITLLFNANKVYDRQVVEGVGEYLQASQCNWDIFIEEDFRCRID NIKDWLGDGVIADFDDRQIEQLLANVNVPIVGVGGSYHQSEDYPSVDYIA TDNKALVNAAFMHLKEKGLNRFAFYGLPASCGMRWAQEREYAFRQLVSAE QYQGVVYQGMATAPDNWQYAQNRLADWVQTLPHQTGIIAVTDARARHLLQ VCEHLDIAVPEKLSVIGIDNEELTRYLSRVALSSVVQGTRQMGYRAAKLL HQRLKLRQKQQTDPPLQRILVPPVKVMARRSTDFRSLRDPAVIQAMHYIR HHACKGIKVEQVLDAVGMSRSNLEKRFKDEVGQTIHGVIHEEKLDRARNL LAATSLPINEISQMCGYPSLQYFYSVFKKGYSITPKEHRDKYGEVSY >YPO3184 hypothetical protein MHCPFCAAVDTKVIDSRLVSDGSQVRRRRQCLDCNERFTTFEVAELVLPR VIKSDEVREPFNEEKLRRGMLKALEKRPVSSDDVETAISHIKSQLRATGE REVPTKMVGNLVMEALKRLDKVAYIRFASVYRSFEDVREFGEEIARLQD >YPO0466 hypothetical protein MKKTNKLLISIVSAISFSAYSNDINDAKVCFYELENFSGESFCAYEGESQ STINNDFDKKIKSISIPPGMVITLYDGIDFTGKKKKLKNDVNLDGMKSFG LYNKISSYHIDPAVCFYTEDNFQGDSTCLAASQHIDLYSDAEGFANSNRT VLPIHNDSIQSIKVPLGMMTTIYKNDQFNAPFFELTENINLETLKTLAMD NQLTSLKASEKKGLYCDQKCIILEKHEINLPEVFGEYWHDSRLVNKQVIL SFNSQENGINDDYKINLTNGPSVRILKNEIIFSDYNMITKFSFDRIDKFD KLSFILQIEKDIVQVQYIQTLDDQLIDLSPIISFKWTHMIDDTPTLTIKN KNTDKPLILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNYIVQ GTCRQLDGIIFKADQYFNSNTKGKTLHIAGKSFPLKPDLLTELNNDGLHE NKMLLTYIDNVNNNQSLSLPAVAKTCMVSIHSILSTRQTRQIRPACIDWT LEIMTDFTLLFGSSLRTWNTEYFGRIIQSIITTGNTGVAVENTEIEKRLS HAVKKAIMSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVEQLP LGIYELLLPSFIYRPIPPIIIENSERVEQHELAFEIEILPSLFPEDARPS DTEIEHARELRQKISETIAQWGQQYQGAHAIDDVDQEVNADENAALSQLL HAGHIVTGIIHRRLILNRPGEIYVVVKLRGEIIAIVLADRFNNRDEVELV ASATLPDYVLSPDSEGTVRGAGTAAVYELARYLQQQGAKTLFSETISQPS ARVKQKVGFTFKSEF >YPO2449 putative LuxR-family regulatory protein MKILIIDECFYTRSGVNTYLNSVSSIKLMDVPTVEEATLAIQEFQPDIII VNLTQYCRYGGHCPLLAQFIHYCTRAKVYIYLDASYPFSETPIPLTESVS MPIPLTESVSILAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKV MCYWMTEMPNYRIARKLNISGSTVYSHKRHITEKIKVRNRLELCFIYNVF KYLY >YPO2478 LacI-family transcriptional regulatory protein MTTGKKRETLKTIAETLNVTHTTVSNVFNRPEKVSPELREKILAYAESIN YHGPAGAGRFLRTGKCGTLGVIFNDNLSYVFSDRHDIALMRGIAEECEKN GINIALMPLKTNNALKKRMMGALVDGYILNATYNNDEVVQAALTSGLPVI TTDIKLQNFTCVSIDDGAAMQAICHHLLAAGHKKFGIVSFPVKRLPGELT SLAEFSTDYDNGVAFGRISACITALSDAGIDLHTSYVAEQPHSETGGEKA AKALLAKEPGISAIICLSDRFAFGVYQFCQDHNIPVPGQIAITGFDDIDI QDPPVGLTTIRQPTVLKGREAARALISGQLDNDISLDFELVVRDSA >YPO0032 hypothetical protein MYHLRVPITEQELKDYYQFRWEMLRKPLHQPIGSEKDAYDAMAHHQMVVD EQGKAVAIGRLYINADNEAAIRFLAVAPSVRNKGLGTLVAMTLESVARQE GVKRVVCSAREDAVDFFAKLGFVCQGEITAPQTTPVRHFLMIKPVATMDD ILHRPDWCGQLQQAWYDHIPLSEKMGVRISQYTGQRFVTTMPEAGNQNPH HTLFAGSLFSLATLTGWGLIWLLLRERHLGGTIILADAHIRYSAPVTGRP RAVAELSSLSGDLDRLARGRRARVQLNVNLFGDENQGAVFEGTYMVLPVA AGDDMAN >YPO1437 hypothetical protein MKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYL RANDNIEDLFRASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVR QAYEGAKIDVLSKKGPVVRLKDLPNLSASLERLLWKVGIKNATELRLEGA KCCYLKLRALRRSLGINILLALAGAISGYHYAALPLMMRSELIEWFEKHI HPAKAPLYETA >YPO3444 putative acetyltransferase MTTTTPIRLLVRPITAGDNLAIANVIREVSAEFGLTADKGYTVSDPNLDH LYELYSQPRSAYWVIEVDGHIAGGGGVAPLLGGEADLCELQKMYFLPILR GKGLAKQLALQALAFARQQGFGRCYLETTASLTSAVGLYERLGFEHIGGA MGNTGHVDCEVTMLKTL >YPO3809 putative acetyltransferase MKLTIERLITLTHQDVIDLAKIWPNQQPAAWQQWITEGRPLFAARFNERL LGAVKVAVYDQQAELQDLCVREVTRRRGVGLYLIEETLRQLPEIKHWYLN GGDLTAAERPQMNSFMLACGFSHEAQGWRR >YPO1233 putative prophage repressor protein MKKKPLTPEQLDDAKRLKELFNAKKKALGISQESVAHELGVGQSAVNQFL NGVNPLNITNAAAFAKVLNEPISSFSPSLAKELAKMAESLSITTRSGAKD KPAVSVANSYPLISWISAGNWYEAIEPYTLRDIEIWPESTKHAHESAFWL SVKGDSMTSPSGISFPEGMIILVDPEKEPMPGNFVIAKLTDDNEATFKKL VVDAGIKYLKPLNPAYRLIELNGNCKILGVVVDARWLQID >YPO2576 hypothetical protein MTTASNLSELQQQIRDRYDNLSKRLQQVSRYVLDNTNSVAFDTVAVIAER ADVPPSTLIRFANAFDFSGFNEMKQLFRMNLVEETASYTDRARLFRAMES EAVPETPLGILQEFARSNAQALQQLAARTEPEMLQRAVELLAQADTIYVV GLRRSFSVAAYLTYALSHLECRPVQLHGLGGMLREQVNSIKARDIVVSIS FSPYAEETVMVSEIAASAGARQIVITDSQISPLATFSDLCFVVKEAQVDA FRSQSATLCLVQSLVVALAYQQEAQAGAALAHRQ >YPO1925 putative two-component response regulator MTKSVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEKLKNNPVD LVIIDIELPNFDGFSLLKKLQQRGFTGKSLFLSAKNEQVFAVRALQAGAN GFISKNKDISEILFAAQNVLRGYSFFPSETLTQLAGQPSSHDPVNRARLL SEREINVLRYLVNGLSNKQIADEMFISNKTVSTYKTRILTKLGLSSVIEL ADYAHTHNLV >YPO2036 putative transcriptional regulatory protein MNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQCREL IFAGLVVEGERNTGQRGQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLS GRQLLSVAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIGYAVP GFLKADGHKRHCVPWLHTWREADLQQVFADNLPWPTRVENNANASAIGEL YSGEWNNYSDLTFIDLGYGIGAGVISGHKLLRGGFFNAGEVGMAFPSGTP RPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWFERCCDQVQQTVFGC VQWVDPQLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAASSMG AESASRGAAMIPLYQVINED >YPO3259 putative rpiR-family transcriptional regulatory protein MGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELARLSG VSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLAR HYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVALHLR QQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILL HMQGQGVPTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNL LSNALLHKILAEGRQRIHQIANLYDSLGELE >YPO3485 putative transcriptional regulatory protein MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLT QVDIAKRIGVSRQAISKFEKGESAPTLDTLIGYTAAMDIDFAANMKKIFT QTF >YPO0165 LacI-family transcriptional regulator MVTLEDVAVLAGVSRATVSRVVNGDTNVKALTREKVEQAVAVLGYTPHPA ARALASSQSNTLGLVTTSYRGGFFGALMDFVQTETESQGKQLLVTQGRDN ADKEWLAIQRLYNLRCDGLILHVRFLSDERLRQLAAANRPFVLLDRLVPD LEARCVTFDHHHASQMATQVLIDAGHRDIACISGSSQRQSSVLRIQGFLD AMQLAGLEPVACLEGVYDLESGYLRADEILKQPRLPTAIYCCNEEMAIGA LLAINKHGLQVPQDISLICYDSGERAPFVCPALTSVHFPIVEMAQYATQL LIDPLIPAVNFPPAIIMRDSVMPPKTAC >YPO3211 hypothetical protein MRIGIDLGGTKIEVIALANDGQVLFRKRVGTPRHDYQKTIQAIADLIADA EHATGEQGSIGVGIPGTLSPFTGKVKNSNSVWLNGRELDKDLSVFLNRPV RLANDANCLAVSEATDGAGAGKKWVFAAVIGTGCGSGIAIDGGSHAGGNG IAGEWGHNPLPWQDEEEREYAQEVTCYCGKKGCIETFVSGTGFATDYFRL SGKPLKGHEIIELVEQGDVIAEQAMNNYERRFAKSLAHVINLFDPDVVVL GGGMSNVDRLYDTLPALISPWVFGGECETPILKALHGDSSGVRGAAWLWN TLRP >YPO2508 hypothetical protein MEIRTATPADFAEIWPLFQAVIRSGDTYVFTPETPEQDAYDYWFGRGVRC WVAVHEQRIVGMYKLIDNQRGLGAHVANASFMVDQKVRGLGIGKALGLHC IDQATTLGYRAIQFNFVVSTNTLAVALWQKLGFKIIATLPEAFNHRQLGY VDAYVMHRVLVPTQS >YPO3682 putative lysR-family transcriptional regulatory protein MFISKNLLVFFTTVQEGSLTNAAVKLFTTPPPMSRSLKILEEELGFKLFT RTTSGLKLTLEGAAFYQEIYPTYVRLTEITKNYKKNKNGIINIATYQLNS DHAGVICDYFIKKGNFNIELRENIGDISQMDIVISTKEIKGYDFDTELTA SCEIKLLYASHLNDLPDRVEYLKKLPFIQSSIFCSSCCFKRFSHNLIQQG YSGNVLRIDDARVRHEIIKKGAGISLSTNYFFDKKKISHSTEISFISDIN FDITYYIYFKSSVINKEFFIQYITNNSLLQWQKAEKKH >YPO0669 LysR-family regulatory protein MKVTLEELQAFTSVVDCGSITAAAEQRSQTTSGISRALSRLEQKLATTLL RRTTRRLELTEEGALFLSHARQIIGAVDDAEEQIALRRLKPAGRLRVNAA APFMQHVIVPMITGFRALYPQITLELNTDDLNIDLLEQRTDIAIRIGALR DSTIHARLLGASRVRLLASPNYLQRHGTPHIIEALADHSLLGFTQPEFLN QWSLPHLPGGRSSIIPNLAASSGETLRLLALQGEGIAELSDFMTREDQLA GRLVEVLADQILETWQPINAVYYRNTQLAARITCFLDYVSEQIKLQGSHW LRI >YPO1308 putative LysR-family transcriptional regulatory protein MHITLRQLEVFTEVLKSGSTTQASVVLALSQSAVSAALADLEGQLGVQLF DRVGKRLVTNEHGRLLYPKALALLDQAIEIEQLFLHDLGALRIAASSTIG NYMLPGMIAKYRRDFPGTPLELNIGNSQDVIEAVADFRGDLGLIEGPCHM PELVTQNWLRDELVVFAAPDSPLCHKALTLVDLADADWILRERGSGTREV LDHLLLAQLPHFKLVMELGNSEAIKRAVRYGMGVSCLSRRVIADQLASGE LVELNIPLPPLIRTLYLIHHRQKHISNALLRFLSYCQEEE >YPO0631 LysR-family regulatory protein MDKFSAMTTFAKVVETGSFTRAADVLALPKARVSQRVSDLERHLGVRLLN RTTRSLNLTEDGQAYFAKCQVILQEIDELEGALKGGSVEPRGKLRVEALV SVARWVIAPSLHEFQARYPNISVRLGGSDRISHLLDNGIDCAIRGGHLED SSQIARHVCDVHLGLYAAPAYLEAAGAVTHPQELSVHRRISWFTGQRNPF IWSLQSASDAFELPAEEGLLFDDPDVALASCMAGSGICPGAPFAVESWVR AGALVPVLPHWRFKARPIHIIYPSNRHLSARVRCFVDWSLEMMQANTSMR ITPWELAERI >YPO1576 putative GerR-family transcriptional regulatory protein MINVALIDDHIVVRSGFAQLLSLEEDIRIIGEYGCAAEAWENLPKTDVHV AVIDISMPDESGLSLLKRLRQQIPHFRAIILSIYDTTAFVQSAMDAGASG YLTKRCDPAALVQALRTVNGGGLYLCTDALRALRQMPQQPSKLTILTPRE KEIFQLLVKGISVKALAEQLSLSHKTVHVHRANILSKLNCETTIELVHFA LQHQLLAGN >YPO2593 putative LuxR-family regulatory proteins MGIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSAD VIFIGVDEFSFFEALKRLDKTPAEADVFLICDARLNSFLQGIPRFSDVTM IFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTP NENIVLKLFNEGFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVELIK MFMFK >YPO0260 putative AraC-family regulatory protein MIADEQASASAFANSAITSILCYPIDLFPIYQDLARRTLPLNKGHLPHAV NDKYKVLPANVEIIQAAEELINIERVASLRFLYLYCLGIDNVYFSKLLDS IVGTNNELLEFFEKNRLNPWSVSRYANELGISTRKLNFLFYEKFGMSAKQ WLLDQRLKKGCELLLSTRLRVADIAMECGFSNHAHFSDSFRRRFQQCPSH MRSLIE >YPO1655 cold shock protein MSNMMKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQDQGFKTLAEGQN VQFSIENGAKGPSAANVTAI >YPO1904 putative transcriptional regulator MHPLFRAHQLSLRLPLCFFILRPPFISVTGGYMTSYQLLRLRQVEQKTGL KRSQIYLYMKEGAFPRSIKIGPASVAWLESEIDEWINKKLSDR >YPO3348 transcriptional regulatory protein MIPQDNELLTEIAVSYYQDEMTQEEIAHKFGISRIKVGRLLKRAKTEGIV EINVRYHPVFSTRLEQQLIEHFGLKRALIALDYQDEDEQRRQVAALVSAY LATNLKDNTVLAVGQGRNVAAIADHVSVVPERHCKFICGIGGTHRPGDAI NADHISRRLAKKFGGTSETLYAPAYVENRALKEAFMQNGTIKETLDRARK ADMALVGIGDMNENSYMVELGWFTPQEIVDASLHQGVTGEIAGYDFFDAQ GQPANTVMNDRVIGISTQELRQIPCVIAIAAENTKALALLGALRTGAIDI LATSASNARTILKMIQHQS >YPO0881 hypothetical protein MMKCPVCGGVELIHEARDVPFTYKGRKFIVEGVIGQHCPACGETVMTEAE SDVYAAKTMLLRKMVNTESIAPAYIVQIRKKLGLNQREASEIFGGGVNAF SRYEKGKALPHPSTIKLLQVLDKHPELLNEIR >YPO2378 TetR-family transcriptional regulatory protein MNKIQHTHVDTREHLLATGERLSLRLGFNGMGLSLLLTTAGIPKGSFYHY FRSKEVFGEAMLQRYFDRYDAEMESLLAGSQGDKRHHLLHYFAQSIANYC GSECHNACLAVKLSAEVSDLSEPMRHALDIGTARVIGRLQDAIEAGIDEG SLRTVLSPAATAETLYALWLGASLRAKVKHSVAPLTCALGSIELILQPA >YPO0517 ATP-dependent helicase HepA MPFTLGQRWISDTESELGLGTVVAIDVRMITLLFPATGENRLYARNDSPI TRVMFNPSDTITHHEGWQLKVEEVTQENGLITYIGTRLDTEETGVAMREV LLDSKLTFSKPQDRLFAGQIDRMDRFALRFRARKYQSEQFRLPWSGLRGI RASLIPHQLHIAYEVGQRHAPRVLLADEVGLGKTIEAGMIIHQQLLAGRA ERVLIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALLDSSNPFDTEQ MVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHMAWSEEAPSREYQVIE QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYR PIADAVTLLLGGERLTDDKLNLLGELIDEQDIEPLLKAANSQSEDSEAAR QELVTMLMDRHGTSRVLFRNTRNGVKGFPHRVLHQIKLPLPTQYQTAIKV SGIMGAKKTLDARAKDMLYPEQIYQEFEGENATWWNFDPRVEWLLNYLVA NRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSLIERDRAAAYF ASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI GQNREIQIMVPYLEDTAQAILVRWYHEGLDAFEHTCPTGRTIYDSSYQEL ISYLATPSEQEGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQ ELAQSIAEQDNDINLVSFALNLFDIVGINQEDRSDNLIVLTPSDHMLVPD FPGLPPDGCTVTFDREQALSREDAQFVSWEHPIIRNGLDLILSGDTGSCA VSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPVRMLMDRNGT NLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEAQAQ ALIETAKREADDKLSTELARLEALKAVNPNIRDDEIEALEHNRKMVLENL NQAGWRLDAIRLVVVTHQ >YPO3310 putative transcriptional regulatory protein MSRQDEQRLLVKIATLYYTEGMKQSEIADSLHLSQSFVSRAITRCVKEGV VKISVIQPANMFIGIESRIQKHYGIDQAIVVDITDDASPAQIKQAIGSAA AHYMQTSIRPNDMVGISSWSSTIRAMVDNLHPLNIKTSGVIQLLGGVGPN GNVQATLLTQSLANILNCPAYLLPAQSIERSTEDRARLISSGEVADVVNK FAEVDLALVGIGVLEPSQLLKNSGNYYHEEMLKLLAERGAVGDLCLHYFD AAGNAVLSDEEDPVIGMSLPQLRACPRVVALAGGIEKSAAIRGALTGNYI DVLITDRLTAETLL >YPO3020 N-acetylmannosamine kinase MGKGLALDIGGTKIAAAVVTESGMLIGRQQIATPRGGAGQLAAALETLIA PYRHQVDFIAVASTGIISGGRLTALNPANLGGLADFPLYDCIRSISDLPC VLLNDGQAAAWAEYQALGDKNDNMMFVTVSTGVGGGIILNKKLLVGQRGL AGHIGHTLSDPHGVLCGCGRRGCVESVASGTAIGAETLGWKQPVSAATVF DMAQQGDAQAGKVINRSAAAIAQMLADMKMALDLEVVILGGSVGLAVGYL ERVVAAQKTLPGIYRVPVQEAHHRQDSGLLGAALWARTSL >YPO2388 LysR-family transcriptional regulatory protein MWSEYSLDVVDAVARTGSFSAAAQELHRVPSAVSYTVRQLEDWLAVPLFE RRHRDVELTEAGVVFLKEARDVIKKMNDTRRQCQQVANGWRGQLNIVVDK IVKPQRSRRLVLDFYRHFPDVELRVRYEVFNGVWDALSDGRADIAIGATR AIPVGGRFVFRDMGFLSWLCVVSVDHPLALLSGPLSDEQLRPYPSLCLED TALNLPKRDTWTLDNQQRLVAPDWSTGIDCLCAGLCMGMVPAHMVSPLIA QGKLAAITLAEPLPDSPCCLTWEQNNHSPALAWLLDYLGDSVTLNTEWLR DDSQQLIANN >YPO1746 cold shock protein MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNV EFEIQDGQKGPSAVNVTAI >YPO1651 AsnC-family transcriptional regulatory protein MDKIDEQLIAILVENARTSLKDLSQKVNLSSPSTSERLRRLEEQNIILNY TLGLDQKAFGYNLQAIVRVKPVANMLDAVEKMIKDTPECIECDKITGDDC FLSRLSIRSMGQLDTIVDRWSEQAETYTSIVKTTPITRRFPPLVRPIKI >YPO1849 hypothetical protein MIFFTRGQQLATLADAGKSLPEEHTITFEDPLEMVRVLSAARIVLLRTVK MYPGSITSLSTRLKRDRSTVTRDVAILKKAGLVTVEQKILPGHGRMKEVR TIAHRLKLEAFL >YPO0255 putative two-component response regulator MNTKLLIVDDHELIIHGIKNMLAAYPRYLIVGQADNGLEVYNLCRQTEPD MVILDLGLPGMDGLDVIIQLLRRWPALKILTLTARNEEHYASRTFNSGAL GYVLKKSPQQILMAAIQTVAIGKRYIDPALDASMVIKLTQGSDNTPPVLT PRERQILKLITEGSCNRVIAAQLSISQKTVETHRLNMMKKLDVHKVAELI HWSYRLGLNV >YPO3570 BolA-like protein MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQ AVYAPLMEYIADNRIHALSIKAYTPQEWQRDRKLNGF >YPO2283 putative LacI-family transcriptional regulatory protein MATMKDVALRAGVSVATVSRVLNNTAYVEPGTRERVEKAMREYNYQRNAA ALALAKRSGNMLGLLTGNLADPFFSRLARGVEEVARKKGAKLMVCSGGHQ EELEKAGLDFLINQGCEAIVAHITRMSEAEILRYAAHTPGLVLINRYLPA IANRCVWLDNTRAAEASTHYLLQNGHTRIACVTAKLSIDDKKQRLEGYRA AMASAGITVPADWIISVPFDEEGGELAAEKLLASDQNFTAVVTFNDVMAA GMMRSLHQRNISLPEQLSIVGFDDVVLARYLYPSLTTVHYPIERMARRAA NIALLLHAQGEVSPQINMFSADLVIRDSVAQVGKNRGK >YPO3840 putative TetR-family regulatory protein MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQL SRATAYRYFPTQSALVSAMVDESLGPILAWQPTQPDARQRIAELLSFAYP RMLQHEGVLRAALHLSLQQWADARNSDSNNNSNDSNNSSNEEKLIRGNRK RLLKLAVEPLEETLAPEALQRVIHAFSLIYGSEVFMVLKDIWHLDEAGIQ DVTQWMGKAILLQAETDSQLAAQDKTHS >YPO3958 putative response regulator protein MKPAILVVDDDTAICEVLRDVLNEHVFDVLLCHSGNEALQITATQPSIAL ILLDMMLPDINGLLVLQQVQKLRPSLPVVMLTGMGSESDMVVGLEMGADD YIAKPFNARVVVARVKAVLRRSEVLAIESSSVIESSSVKACGLQFNGWRL NTDRCQLMNPQQQQIDLTQGEYGLLLSLMQNARKVLSREKLLELTHRESL DVFDRTIDVLIMRLRRKIEVNPHQPTLIRTIRGVGYVFAADIIHA >YPO2243 putative AraC-family transcriptional regulatory protein MMSEDILFIEELIEWIEINLEKRPTLDDVAKISGYSKWHLQRKFKSIVGL QLASYIRGRVLTRAAVALRISRKPIITISDELGFDSQQTFTRTFKKRFGV TPNSFRQMNHWDVQGMIPRFGFYENYTPEIKQVTLPGKELVGFTRRLDFE EYNGCAVQRSSCMAMKDEILLDFFKEVNFACQRIYSLFSVKDVDGQQGQK SVYYSTAIDKERKHEIQGSREIDHIAIPEGEFLSISHQGSAKECVKFATY LFNNVLPKLRDEVGRGIEMEVIEIDHCHAESKLRDISVVYRYLMAVN >YPO1169 putative LysR-family regulatory protein MQKLLFSGRINLKMIRYFLAVSDELHFGKAAERLHISQPPLSLQIKELED ALGFPLFIRDSRNVVLTLAGEMMKAEMKDVFDNIENSLSRVSYIARHEQT HLNIGIIGSALWHQLLEKFKHYKTVNPKTTWSLHELPPSKQYEALLNKKL DIGFWRCADLEQNPALIYRRVEKQRVAVAVSNESLLVNKKILTLKDLSGQ TLIFLTFNHSGYSKNLYNSCLNAGCTPQAIYQFDEPQTQLAFVNSNLGIA LVPESMQEIPWPNIKFIPLKEDLSADLFAVYHPDSVTPALNKLLALF >YPO0799 LysR-family transcriptional regulatory protein MDRITAAEVFVAIVDRGSMIAAAESLEMSRAMATRYLAQMEQWAGARLLH RTTRKLSLTHAGEATLERCRRMLEFAQDMDLAEGQESEELRGLLRISCSQ SLGQSALAIAVADYLRRYPQVAVDLQMNNRAINLVEERIDLALRITNELD PNLIARPLSTCYSVVCASPAYLSVSGIPESPQDLTVHNCLTYSYFGESLW HFDQSGVKSSVAVSGNLSANESVVLLSGALEGAGITLQPIYSVAPYIARG ELIKLLPDYQPQAMGIYGVYASRRQMPTTLRTMLDFLVEWFATHPQWLST MK >YPO3757 putative acetyltransferase MKIVLLNAATFPIYRSGLASLLIDAVTYGASVGYNTHTLSQEEAEGYFHS LRPAIEREALLLWIARDEIGIIGTIQLVLCQKPNGLNRAEIQKLLVHSRS RRTGIGHKLIIAAENTAVQLRRGLIYLDTQSGSSAESFYRAQGYRYVGEI PDYACTPNGNYHPTAIYFKRLFTVVQPHTAIQN >YPO1890 GntR-family putative transcriptional regulatory protein MPGGMGGKGVDRKFIETLKTYCDDANRGGGPLYQRLEKGFRDLITRGELK AGYAIPSERELSERLNLSRVTVRRALSELANAQVIVQRRGARSTVAGRVE KPLSSLTSFSEDMISRGYEPGARWLQKELTHASPSEIIALNLSPGALVWR LKRLRTVDEHPMAVEIAVVPQMFIPEMDELRDSLYSVLQLHGFMPARALQ RIRAEPLSRDHSQLLDMPAHSPALHVERHCYLEDGRPIEYTHTWYRGDSY DFLVELQRDITPGLS >YPO2337 putative regulatory protein MYKIKKFSQITGISEFNLRYFDQIGLLPAERDNSRYRLYHPRQIAMAHLI LSLQKAHVSNEKIKSILMDYSSQNSQSALCYAQHAIDETLHQLTCARHFL TTQIERQMLINDAKRRLNNPFIEERNIEPLGIFSINTPNIIDFFKYVSEV SGNPDWYLRHRYGFIVERESIQKNNYKLMNFFCNEPNIINKHGGDFPAGS YFSGFYKGSLENNPAVSKHLSQADDNGMNHSSKVIIEHISGPATVKCKSE FLIKVMYPCHHQLDGSHETPTVLTPSSTN >YPO2823 putative regulatory protein MATRYIKWPEMLLLVGKSRPTIWRMYSKRNEFPKPERTKSGMFLGWPEAS YEEWVQSKKC >YPO2324 putative transcriptional regulatory protein MHKSDKKLDQAARAAWMYYVAGQTQHEIAEALGVSRQVAQRLVACAIDNG LVSVNITHPVARCMALAEQLQQRYGLHRCQVVPSQGMDNAGVQRAIAVAG AEVMAQFLRQEQPLVIGVGSGRSLKAAIDELPDVERPQHSCVSLIGAIAA DGSCTRYDVPLWMAEKTQGRYFILPAPLFADSAADRDLWCNHRIYRTVTE KAAQADVTFIGIGSIGYHCPLHKDGFISAQDVDALLASHVVAEMLGNFID ADGQPVPYALDQCLTSVKLRIQPEKPVIAIAGGKEKHQAIKAALKGQWLN GLVTDEESAMVLLAEEKA >YPO0846 LacI-family regulatory protein MNGKLKIQEIANQTGLSISTVSRVLAGKGNTSAKAKQQVMAYAKSQGILQ NLSSGRLMLNNIMVFAPHRAFDVRTDIFYYKVIQGITQAVSQHEVMIRYC GLSETHSDISLFLDKMTHPQSEAAIIIGIDDPRIHALAASLHKPAVLINC RDKEMSLDSVSPDHQSIGEFSAHYLIQQGHRRILTLQCLRRNTMELRLLG IKDAFASNNMRFDDHQHLITTHGFGAEEAEQAITTFFTACEDESRLPTAI LVGGDYMAVGAVNALNKLNVNVPNRVSVMSMDGFNLAEIHDVPLTAVHVP RDELGAEAIQLLQRRVLRPDAPFSNLLLQGKLVVRSSVKQVNQNRAMPAA NKPTDQIYDL >YPO4077 hypothetical protein MNIDHGARQPQSVGERLLLLLKTHGPLQAGEAGNILGTTGEAARQQFVKL AKKGLVVAEAQTRGVGRPIQLWQLTESGNTHFPDAHGELAVQLLRLIRTQ LGDNALELLIDSREQETRDQYCQAMVGVSNVAERVERLVAIRTGEGYMAQ SQVEADGTILLIENHCPIWAAAASCQRFCRTELAVFQQALGVPVERVEHI LSGARRCTYRIHPE >YPO2762 putative AraC-family regulatory protein MTGPDFPVVTSRIPQTLSFRCEAFNANTEFLPHTHPFGQLICVKSGVLAM SIGGQRFLAPPEFIVWIPAGMEHSSYNRKPMHFRAIDIALDFCTELPASP GLMNVSPIFNAIVEDCFTRDLLMPETQQDRRLAHVLIDQLKVSPVQRTYL PTSQDKLLSPILAALERCPADSTSLALWAKRVYTTERTLSRRCQQELGMA FSEWRQRLRFLHAISLLEQGKTVNSVALDVGYSSASAFIAMFQQISGTTP ERFRRGNSGLY >YPO1934 putative LysR-family transcriptional regulatory protein MTLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDR SGYRAVLTETGQNLLPRAFALLESAAEIRNTLGASEGLSGICNFGVGELS ALTWLPSFIASARLLYPKLLLAPHVDVGAALEGRVNKGEMDFAIIAGRSS RQNILSLPIAQAQFVWMASPTLANTVGTADSALRQALPLITLPPGAGSSR IIDAWLMAYGIASVARINCNSWGAIVGMLIASVGIGILPTSWAEKLSLHN QLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPL NNSLPLHHSLPLHHSLPQRD >YPO0084 possible transcriptional regulator MLLTDLGNVILPRARSAMEELTRIPALLRRLQQRDDEGIEDLEPTWLFNE RRLQIFLSLYRQQHALHVAQALDITQSAVSAALKVLEKGAGMYLFHRTPK GMLPTPAGHEIAPCISRALNALHHIPEEITAHRGDLTGSVRVGALPLSRA RLLPQAMIKLISRHPGIKIVTNESGFTALIAELRAGDIDFIIGALRNEKM LLDIHSEILFEEELILLARPNHPLSDRRVKNQELKDIQWVLPRNHAPSRH LLEVAFCKMGLASPQPVVESGDPAVVRALLLGSDMVAAVSSHQLDFEVSE GILIPLQVNLTGTRREIGLMTRQKALNSPATDALINCVREVIQSSNDK >YPO2497 putativeLlysR-family transcriptional regulatory protein MNNLPILSDLRVFLLVARRAGFAAAAEEMGVSPAYVSKRVAILEKTLNVA LLHRTTRRVTISEDGERTYEWAQRILHDVDQMMDELSAIRQEPQGTLRVI SSFGFGRRFVAPALSALAREYPRLELRFDVEDRLIDLVTEGVDLDIRVGD NIGDNLIACQLAPNRRILCASPDFLQRYGTPKALSELPGFACLVIKERDH PFGIWRLHNGTEEQSIKVTGPMASNHGEIVHQWCLDGQGIALRSYWDVKD NIHSGKLVHILPEYFQSANIWAVYVTRLAMSAKVRVSVEFLRRYFNEHYG AENTSANGGTLKR >YPO3690 putative ribonuclease inhibitor MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPV EIEFVHFSRRHQRRFAAIVLLLEEAEEELAGRLHFNVVDEHIV >YPO1088 putative DNA-binding prophage protein MIMAKARLHDDAMVQLLMEDPEFAQVYLHQALLDIDEEGGQEAFLMALRH VVEARGGMASVAKKAGVSRETLYRTLSPSGNPTLKTLLSVVSATGFQFSH LASITA >YPO1936 putative aminotransferase MNKIITDQRHQFSSRVNDLHPSPIREILSVIDRPGMISFAGGLPAVESFP HMSLEGMPQPMLQYGASEGELELRQQIAQNLCERGLSCTEEQVLIISGSQ QGIDLVAKLFIDEGTPVAVESPTYLAALQVFRFFGAQFVAYDSTQPDIDK LRTEKPAFAYTIPTFQNPSGHCLDTEQRELLAKTCDDIMLPLFEDDPYHD LVYDPCERKPVCASLQRASWIYQGSFSKSLSPALRLGYLVASSELIPYLT RLKQAADLHSSRISQWLVLQQLRSPRHTEHMHELAAYYRTRRDAFEISLQ RHFGSLATWKKPAGGLFFWLTLNRCIDTRQLLPKALASNIAFMPGESFLP HSSEGCGQLRLNFSHATEEQADVGLKILAGLVQEHA >YPO2320 putative DNA-binding phage-related protein MKKTDDFDIIPFAVVKAAALSHPQVNDAYTDLQIRQAMMTELKAARQQCN LTQEEVALRAGLKKQNISRMEKGIISPNLTTLSRYAAALGGTFVFQFNPN SSYATKE >YPO2903 putative RNA-binding protein MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDL ATTRQDIAEVASEIQRFYHLELNASADDYYQINGSRLDKRLCLIHWLRRG LRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSI LRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSM TQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLILMLTMIKAHHY HSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIER CYFNIGIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIA ISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLS HDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRIL ELP >YPO2998 putative two-component system response regulator MKILLVDDDLELGTMLKEYLGGEGFTAKHVLTGKAGIDGALSGDYTALIL DIMLPDMSGIDVLRQVRKKSRLPIIMLTAKGDNIDRVIGLEMGADDYMPK PCYPRELVARLRAVLRRFEEQPTLSSIDSGIITQGGLTLNPSTRSSEWQG KPFDLTASEFNLLELLLRSPERVVTKDELSDKGLGRPREAYDRSVDVHIS NIRQKLAALPGNHLNIETVRSIGYRIR >YPO2126 hypothetical protein MMKPNNGEAPKCANTNEASSLSVSTKELTMNSLAKSNANNTQTSAISQFH FDTHAVRVLSIHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQG LSRGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRK TGSYDSPRKATKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMITM WSALKTHFGCSYKEISEDQFTEALSLAARVTIEGEFLGKQEALPVPKLEV SLPIQWWFDNNPAVKYGNRENITKMKQNHFCFTPSLNVTIDMLCGDSDTS AAIQLINIMEMAGYDVSAPKAEIVAMRKHIANVEYGMKAISDACIRAKNK KVIFRGKKADITIN >YPO3913 TetR-family transcriptional regulatory protein MGTIMGVRAQQKERTRRSLIEAAFSQLSAERSFASLSLREVSREAGIAPT SFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFM EFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMP RSFTEAQAEAMVTIVFSAGAEVLDVDIEQRRQLEERLVLQLRMISKGAYY WYRREQEKLAASRVE >YPO2071 putative DEAD box family helicase MIDDFATDGALAQAIKGFNPRESQRQMAAAISEAIDAKQQLVVEAGTGTG KTFAYLAPALRADCKVIISTGSKALQDQLYSRDLPMMVTALKYKGKLALL KGRSNYLCLERLEQQSLAGGDLASETLVDLVRLRGWSAETVDGDISTCGQ VAEDSFVWPLVTSTNDNCLGSDCPLYKDCFVVKARRRAMDADVVVVNHHL FLADMVVKESGFAELIPTADVMIFDEAHQIPDIASQYFGQQLTSRQLMDL AKDIIIAYRTEVRDSAQLQKSADRLTQSTQDFRLVLGDPGYRGNLRDVME QPTVQRALLLLDDALELCYDVMKLSLGRSAMLDAALERATVYRNRLKRLK DVRTPGYSYWYECNSRHFVLALTPLSVSDRFRELIEEKPGTWIFTSATLS VNDQLSHFTLRLGLTHAKTLLLPSPFDYANQALLCVPRNLPSANEPGAAR KLAVLLKPLIDANQGRCFFLCTSHQMMRGLAEEFRASMTLPVLVQGETSK GQLLAQFVAAGNALLVATSSFWEGVDVRGDALSCVIIDKLPFTSPDDPLL KARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR LVMRPYGAMFLNSLPPAPRTRDLAKAIAFLKQRD >YPO0936 hypothetical protein MNLQHHFLIAMPSLQDPQFKRSVIYICEHGEKGAMGLVINKPLEQLTVET ILEKLKIKSPSRDPAIRLDNVVLAGGPLAEDRGFILHSPQEGFASSIHIS PETMITTSKDVLETLGTSGQPKNLLVALGYASWRQGQLEQELLDNVWLTT EADTHILFNTPIAERWQAAANKLGINIFNIAPQAGHA >YPO3017 putative rpiR-family transcriptional regulatory protein MKTGAPRFKPGKILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADL SALTQAGEATIIRFCRTLGYKGFQDFKMDLAIEVATRHNSENSLLDADVQ EGDDTLAIGSKLQSAINNVLSETLNLLSIESVEQVVKVLRPADRICIFGV GSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSG TSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGD SIGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQNG >YPO3146 probable AsnC-family regulatory protein MLDKTDRKLLRMLQEDCTQSLHVLADAVNLTSTPCWKRLKRLEDEGFIRG RVALLDSEKLGLGLTAFVLIKTQQHNSDWYQEFVAFTKQMPEVLAFYRMA GEYDYLMQVEVADMKSYDRFYKRMVNGVPGLIDVTSSFAMEKIKYTTVLP VPE >YPO1503 putative LysR-family transcriptional regulatory protein MDLTQLRMFCCVAETGSVARAAEQMHRVPSNLTTRLRQLELELGADLFIR EKQRLRLSPMGHNFLCYANRILALSEEAMSITHAGEPAGNFPLGSMESTA ATRLPNLLAAYHQRYPKVSLSLITGTSGEIIEQVRAGTLATALVDGPVQH DELHGCRSFDEQLVIISCLERPPILQARDAVDETLFAFRPSCSYRLRLES WFRQVGVLPGHIMEIQSYHAMLACVASGAGLALIPLSVLTLLPGHERVQV HPLPPDIAHTATWLIWRKDAFSPNVRALKELIIENVEIP >YPO4028 putative regulator MAKLQYIHDEAGKPQFVVLPIAEYQQLISNAKYEDIPYVADHDDDQTIPN EVVQIMINDGVSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQ KKTREKLAAIYKCRAAQMIL >YPO1837 putative AraC-family transcriptional regulatory protein MKHKISFCPGVGSAAHIIQHSELLLTSVYIEHPLLIMVNRGYKIIRWENQ ECVILPGEIAVINSGQTIDIINGLSNDDLFFSQQLHCDPSLIAAFAHHPT SADLGVIPGVMAIRNLAPEFINTFGNIFNSISENSDIPTVIIKHRMLELL LWLAQRDVKFILNDGNGLSEKVRRCLASDPHKIWSASEVAEHMTMSEVVL RRKLAAENILLRDLMIDVRMTSALRLLQGTDWPISLIANQIGYESSSRFA ERFRKRFGFAPTAIRGHHRLQPVESESPIHSVNRYLKPSYS >YPO1737 AraC-family transcriptional regulatory protein MSQENHLALVCALSKWVETHLGRVIYLEELAAYSGYSLWHMQKIFKDVTG VSLGKYIRERLLAGAVYQLRSSDSTIFDIALDFGFGSQSHFTYMFRKHYG ITPYDFRQNTDIDLNIALPLHAIHQKQA >YPO0010 putative GntR-famly transcriptional regulator MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVS RTAVREAVKMLAAKGMLLPRPRIGTRVMPQTNWNYLDQELLTWWMTKENF DQVMQHFLILRTSLEPQACYLAATHANEKQRELLASLVAEMRALHSNFNR EQWIQVDTQFHKLIYEASGNPFLISFANLFSSVYYSYFRAITGDEVIKLQ HHQNIVDTILAGDNQGALFACQVLLKTVD >YPO2169 putative LysR-family transcriptional regulatory protein MFLSRKLEAFMAVVENGSLSKAARVMNRTTPPVAKSIKDFESIIGKKLFK REKFGMSLTRDGEVLYNDLKDLYQQEKEITKKHLTGHVSNVINIYYDWGK SENLTQLYKIAEKNNIQANIIKFYYENIDEIGDYDGNSLILSSEKIASER FMLLNEVQDIGFGIYGRKDIINESEDIINILHSNVWLCNPTLYKSKFVKS LEESVKKQYDKVSVRQVDNLACCLNFIYSGRYICITDSIMDDFNGDSKLD FVNLTNFKDENKLYFYKSRSHSSVLNRLIDYIHTLE >YPO3651 putative GntR-family transcriptional regulatory protein MLAGMGVIKPETLRYQVENVLRQAIMSGRFTPGERLIERELCETLGVSRT SIREALRRLEAEKLVSIVPHKGPIVAIISRQEAAELFALRGLLEGFAARE FAQRATDVAIVHFAQAIQALRMAGMTKDRAKVLKAKTDLYDVLLDNCGNG LVKETLTSLHSRINLLRATSLMDPQRLPVSINEIDDLYQALKARDPDAAE RHVANAKEVALRILEETNAT >YPO1629 hypothetical protein MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEA DTYCGVQGSVGIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREV RIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNH ITGEFGHFRLPVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSH FYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNLLTMLGSPFGR GGWGVV >YPO4075 putative acetyltransferase MIRVYQPDDLNALMQLWLTSTIDAHPFVAEQYWYESAPLIRETYLPAART WVYQQPGAAAEENTIIGFISILEEQLVGALFVAQAFHGHGVAKALMDHVQ QRYPALSLEVYQQNRRAYRFYRKQGFTVIGRAYHAETQGTILTMHWQHPA H >YPO1279 putative transcriptional regulatory protein MVRSIWYFLRQCLMQEIKVMRLYQEVGSQLREAIVSGRYSVGDRLPPERD IAENFSVSRSVVREALIMLELEKLVEVRKGSGVYVVNVPTMSLNGESATS IDSGYGPFELLQARQLLESEVAAFAAMQATKADIIKMRNAIEQGKAALTA GAIDESADELFHCLLAQSTQNSVLANMVAQTWQVRKSSAMWQGAHSHTAD FSYRWQWLDDHQKILQAVLRRDSKAAKQAMWQHLENVKLKLLEISDADHP DFDGYLFESAPYQIEE >YPO2273 phage hypothetical protein MADKQRAERIKKVILEHSTYEELAEKTGISVSTLVRIASGKTEPKFSDII QIAKITGADLNTLAYGYALDVKEEATERKLITSADGYTDEETTNAHNFIV WNIRTLEKQDILALARQVSALSSYTYSTKMFMKKAVSGEE >YPO3545 lysR-family transcriptional regulatory protein MARDRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELD VVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHIT IVSEALSPAWKLFPLIDKLALKANTQVSILTEVLAGAWERLEQGRADIVI APDMHFRASSEINSRKLYKVTSVYVASPDHPIHQEPEPLSELTRVKYRGI AVADTARERPVITVQLLDKQQRLTVSTIEDKRRALLAGLGVATMPYEMVE KDIAAGRLRVIGPEYSREADIIMAWRRDSMGEAKSWCLREIPKLLGK >YPO3009 putative two-component response regulator MKILIAEDNAHIRNGLMEVLAHEGYRPIAAENGVQALALYRQQQPDFIIL DIMMPELDSYKVCREIRKHDWQTPIIFLSAKDEEIDRVIGLELGADDYIS KPFGIHEMRARIKTIVRRCLRKVPESAEDAGFPFGDLMVFPNELCAIRGE TRLELSLREVNILRYLYQHKGRVVTRDMLFDAVWGYDHLPQSRTLDQHIS KLRKTIELDPVHPVLIRTVHGAGYRYQGTAQSLEK >YPO0883 putative DNA binding protein MAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPN EVVQIMVNDGVSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQ KKTREKLAAIYKCRAAQMIL >YPO3683 probable lysR-family transcriptional regulatory protein MERLKQMSVFAKVVECGSFTAAARRLENSVSSISQTVSKLENELNVKLLN RSTRRIGLTEAGRIYYQGCRRMLQEVQQVHEQLYAFNNTPTGTLRIGCSS TMAQNVLATMTADMLKAYPGLSVNLVAGIPAPDLIADGLDVVIRVGALQN SGLFSRRLGAMPMVVCAAKSYLSQYGTPAKPSDMANFSWLEYNVRPDSNF ELIAPEGITTQISPQGRFVTNDSQTMIRWLKAGAGIAYTPLMWVIEEIKR GEVEILFKHYHSDPRPVYALYTEKDKMPLKVQVCIDYLTEYFKRVADVYQ DYR >YPO2897 hypothetical protein MRLTSKGRYAVTAMLDVALHSQDGPVPLADISERQGISLSYLEQLFSRLR KNGLVASVRGPGGGYLLGKDASAIAVGAVITAVDESVDATRCQGKEGCQG GNRCLTHTLWRDLSERISSFLNNITLAELVNNQDILEVADRQNNDTRRTA NGRPQETINVNLRA >YPO0878 putative regulatory protein MTYSSLIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEV NDWIEQQIAHSRGNKQ >YPO0611 LacI-family regulatory protein MSVTIKDVAKRAKVSISTVSYAINGSPKITEETRLRVLKIAQEMNYTANN NAKMLKAKKSGAIGLFFNSWFGPVYSELVRGIEERVHREHYDLVACSLYG GEQSTAHKYLRDRSVDGAIILTSSFDDRFLQSVASDVLPIVVLDRELKSP HIYNVLIDNFGGAFKAVNALLAKGCRDIYFFSGPEQSYDNQKRLDGFIAA LGYHNIQLNRDFIIHSNFTEADAYLKMQALIAAGRVPSAIFSANDEMAIG ILRAAKEHNIRVPDDLKVVGFDNIYASSVLTPSLTTINHHKYEMGVISAN TLLRAIKEETNIDAVTLLPTELIERETL >YPO1642 sucrose operon repressor LacI-family MVSLKEVANLASVSLMTASRAINSPEQLRPETYQRVMQAIESLNYVPDFA ARKMRGHATKTSTLAVLAWDTATTPFSVEILLSIELTAREFGWNSFLVNL TSREDSQRALNQLLAQRPDGIIFTAMGLRQVTIPERFRDKNIVLANCVSE SHSIPSYIPDDFDGQYQAMKLLLQRGYQRPLCLYLPECTLAGKARRAGVE KAWQESALPTEQLNQCHIAWGDEHYQDVIPLLERHCPKGKPNFDVLICGD DRIAFLAYQVLLAKGVVIPQQVAVIGYGDMVGMGELYLPPLTTVQLPYYD IGRQAALHLIRGRESRAIHRLPCPLLERGSIRDSMPNNCVPLFSKQR >YPO1938 probable deoR-family transcriptional regulatory protein MIPIERHQKILALVAERGVVSIAELTERLGVSHMTIRRDVQKLEEQGAVL SVSGGVRSTQRLAIEPSHQDKTMMFSRQKQAIGTSAALHIPRNSCIYLDA GTTTLALARQLEDRDDLLVVTNDFVIANFLIESSQCRMIHSGGTLCRKNR SCIGEAAAHSLRNLSIDIAFISASCWGLRGISTPDEDKVPVKRAISEASS KRVLLADASKYGKVATYLALPLTAFDVVITDNSLSSTVYEELAEKALELI IASPPR >YPO0592 putative kinase protein MANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQ AKERIDMITGRYRQNIFEQSGGEYWKDLFCWPTHVVEHNGKIGIVVPSYQ NHFFFKYGSKNNDFLGIKGREKEGKWFASANNQNKFLDPRERGNILNYLK VCLLLTRAVRRMHAAGLCHSDLSYKNVLIDPEQGHACIIDVDGLVVPGKF PPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHALSVLIYMYLFY RHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSL PWADPQKVPYTIMGPYLTQLFEKAFIDGLHDPSKRPTADEWETALVKTVD LIQPCQNTACEQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSY RPDDHRLMVWNGQSLYAWHVNRLIAPNERTSEAQKKRVGYFVFHNDQWWL VNEGITGLMSLPDKKTIGIGEKLALTDGAQLVLSTEEGGRLVVVQLVAN >YPO1630 NAD-dependent deacetylase MRIRHRLCRFRKSKHVRHQRFRSRIFHRDSAVAKEMKKPFVVVLTGAGIS AESGIRTFRADDGLWEDHRVEDVATPEGYRRDPELVQRFYNERRRQLQQP DIAPNAAHFALADLEAVLGDNLVLITQNIDNLHERAGSKRVIHMHGELLK VRCTQSGQVLDWQGDLSADERCHCCQFPSPLRPHIVWFGEMPMGMDDIYQ ALAEADFFISIGTSGHVYPAAGFVHESHLHGAHTVELNLEPSQVESQFDE KHYGLASKVVPEYIREFLTTCGENRQGD >YPO1237 putative transcriptional regulatory protein MMMIPEQRRDFIYRYVHEQNVASFMDLAELMNVSHMTVRRDIQILEAEGK VVAINGGVKLNNLLKLELAYSEKASLNHELKQNIGVLAAMLIEPGQTLYL DAGTTLFEVAKAVAASNCFNLTVVTNDFTISGYLMDMPHISLYHTGGLVD RRNRSCLGNSAANFLNTINIDVAFLSSSSWDIARGMSTPSEGKAMVKAAV MRASRRNILVSDSSKFGKYGMFPICNLQALTDIISDGNLPLVAQKQIKES GVKLHLVNKEVRAPCSNSQPI >YPO0379 hypothetical protein MQLTSFTDYGLRALIYMASLPDGQMTSISQVTEVYGVSRNHMVKIINQLS RVGLVTAVRGKNGGIRLGKPADQILIGDVVRQMEPLTLVNCSSDFCHITP ACRLKQVLNQAVQSFLKELDNYTLADMVKDNSPLYKLLLVE >YPO3327 putative deoR-family regulatory protein MLQAERHKIICTHVQQQGSALVTELSVLCQVSQETIRRDLTVLQKKQKLI RSFGGAVALDSPEIPVIDIKEIHDGLNVIDRAESFRKRTEEHPDTKMKIA KAALQFIRPGDCILLDNSSSCWFLARQIPDIEITVVTNSVKIIQALACRD KLRIIGIGGEYSARHDDFHGPVAENAIRNFQINTFFFSCQGINQDSGVRD GNDINAKLKQVMLQVSGQKILLADSSKFDQYAFCKICTLDEVDILITNRL SSQNYRSDNPKLNIIESDK >YPO1646 hypothetical protein MNGNISFPEQLRRGELLNVDCPSREILKRVTSRWGVLVLIALSNETLRFS ALRRKIGGVSEKMLAQTLQHLEEDGFIDRTAYPVVPPHVEYSLTPLGKEI QEQVEGLTVWLETNLHRIMEQRQQRSV >YPO3228 putative LysR-family transcriptional regulatory protein MLLLSKSLRYFIITAQKESITLAADKLCITASPLSRNIKELEMKLGCELF TRTSKGILLTSSGHFLYDKIIPVYNEIIELEKELISNHKLNVISEEKRLE LNIGTDIFHYAHLLPIAKARFFNEENVNFSLEVSTSQDISQMLRENIYQV FFSQRVLPKEHGIIHRKLSDEFMMIALQDDMYRDDMSQEDIISSYPLVQY PRQNISSVVDELTNYLISRKLNPIRITLPNVNDHLSIINQGGAIGILPSS VKKLINMHNYNIKLIPFVHKGEKLKVKSNAYYLCDNKDVFEENILPLLGD SHL >YPO1265 putative DEAD box helicase family protein MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARG RVLVLAHVKELVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSV ARNLPLFDSAFSLLIIDECHRISDEDDSQYQQIIQHLRTGNPQLRLLGLT ATPYRLGKGWIYQFHYHGITRGDEKALFRDCIYELPLRYMIKHGFLVPPE RLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPHIVSQIIEYAA QRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQ LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKED CLILDYAGNPHDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTES GEIIEHYGRRCQGWFEDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQ CQAVLVDPDDMLKAALKLKDALVLRCGGMQLETGQDAKGEWLKATYYDED GTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTAADIIAQQALL RYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA >YPO0864 hypothetical protein MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRG RGGKMHRLFEHGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGV IYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARL AQVNRHKEGNLAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAA VDTIEEELQPVGVQPAAVDTTVQEKN >YPO3904 transcriptional regulator HdfR MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGANLFTR HRNNIRLTPAGERLVPYAEMLLNTWRLAKKEVIHSLQHTELSIGATASLW EAYLTPWLQQLYEQQEELRLEARIALRNSLVKQLHERQLDLLITTEPPKM DELACLLLGHFSLRLYSSFSLDLPKEDDTPNEHKNASEVPYIKLEWGADF HQQENRLLDSEQAPILTTTSAHLTRQLLETTGGCAFLPEHWQKEYPQLVI HPDIPPIVRPLYAVWLQNSDQQALIRQLLKTPMNNATQSVTRE >YPO1064 hypothetical protein MSMSEEYQPINCDDYDNLELACQHHLILTLKLRGGEIVEGKASDLLLRKK VEYLIVEQEGTMRELRLDHIASFSHPEIGTVVVSAS >YPO1253 putative LacI-family regulatory protein MFTYKEISTLNELELIVYNYIIKNTDKVMYMTIRELADASGVSTTTVLRF CKKMNCDGYSEFRIRFKLYLEHDEKPPVTFGISEIISYFKSINNSEFDEL LDNVAKQIAATRRVIFVGIGTSGALGKYSARFFSNVGKYSTYIDDPYYPI NSDMYQDAVAIILSVSGETEEIIRIANQFSLQNCKIISLTNSESSTLAKM ADLNISYHMPPVILEGQYNITTQIPVLYIIETIGKKLPQLMNKNTK >YPO0341 putative TetR-family regulatory protein MQREQVLSNALNLLEQQGLANTTLEMLAKALSVEVSDLTRFWPDREALLY DCLRYHSQQIDTWRRQLQLDETLSPQQKLLARYQTLSEQVQNQRYPGCLF IAACSFYPDTEHPIHQLAEQQKQASLHYTKALLQEMDADDADMVAQQMEL ILEGCLSKLLIKRQLADVEVAKCLAEDILTVAQCRKNGALS >YPO0276 putative LysR-family transcriptional regulator MMSIDENTFAFSAKINNHAIYKHLENFIKIVECNSLSIAAHKLNITPSST SRSLAQLEEKLGVVLLKRTTRSIVLTDAGDYLFHQARQLLLDLDETLVNT HSFYNHPQGQLKITCSIAFGVCHLMHLFSQYKETNSDVCLSVDLNDQLVN LNEEHFDIALRITSIPPPNFAIRRICTINWVYCGSKEYLMKRGVPATIED LEQHDCLVNPNVSDAWLYKSTEGESVPLKIKNTVQANSSLGLLHAALHHQ GIVCLPTYMLGDYITSGKLVPILLDYNAKDKEYGLYALYYPSKYNDPKIR SFIDFMLDELSMDVPWDKWRADYQISLS >YPO0736 putative regulatory protein MHTIIEKNMNKQSHIVNGWLIDLTSGFITHQETREKKRLGEYQLKLINVL LEHAGEILSRDELTNLVWKRRVIGNNSLPNAIHTLRVALGDENKQQRIIQ TIPKIGYLLDASFCEIIDATKETETAEQTALAQTDDEEIVAPLNGVTLHE AVAASASDIAHSRIAETNEEPADTAINAPLPPTQTGPVVMTRQHVTASQR PPWNIFSYWSRVAIALLVLITAVAFYRLFPQNKGVSYTAIEQDQEAYSNI RLFQLVDSALSLQQEEKLNQRLKDTLYAINKQSKAKSMSINIYYYVSLRR LDFTFSVESQCENKQLGMTIYHWRQNSQLLNNLIYREMERKINEMVNC >YPO2458 putative LysR-family transcriptional regulator MWFLRQAIFHRWYGDGIPMRKLPSLRMLRVFEEACHTLSFSKAAEALFMT QSAASRQIKQLENFLGKSLFIRGHRGLELTQDEMTMLPIVRQSLDLLEEG VKHVQLSNPLQHLRLQVAPTFATRWLAPRLVTLLQRNSQLQIALISEIRQ KYCDFDSAIRFGDIRRDLSNGHLLCYEQLCLVASPLVMQQGRFPPLTALP QLHILNGDSRLTNWQQWLDAAQITVAAGHNALEFSTQDQVISACTTGAGY AVLDILMISHELDNGLLRQVLPLTVTSTHGYWLEIPQDKGHSPRVIIFQE WLQRELKRDIAKRYSKGEAKPLPAVL >YPO1929 probable LysR-family transcriptional regulator MELRHIRYFLAVAEERHFTRAAARLGIGQPPLSQQIKDLERELGALLFRR VSYGAELTEAGIAFLDVVKEIPVMAERAAQAAQRAVRGELGVLRVGFTAS SAFNSVVPTAIRAFRRAYPDVRLQLEEDNTTRLADGLNEGSLDVAFLRPG FAGSERFHLRMLSEEPMMIVMAENHPAASYEEISLSAFRDETFLLFPREI GLTLYDSVIESCRTAGFEPTIGQLAPQIASVINLVAAEMGVSIVPASMSQ VKVIGVVYRHIADQTPTAKLALAYRRGDTSPVLRNFVLTVFP >YPO0456 putative right origin-binding protein MDQASIIRDLLSWLESHLDQPLALDNVAAKAGYSKWHLQRMFKDVTGNAI GAYIRARRLSKAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFAQTP ALYRRAEDWHSSGICPPIRLGTYTLPQPEFITLPEQHLVGITQSYSCTLE QISTHRAELRLHFWQQYLGDADQLPPVLYGLHHSRPNPEKDDEQEIFYTT AIEPQHIPCNVPEGQPVILQGGEYVQFSYDGPLDGLQNFILTLYGTILPQ LALIRRRGYDIERFYPQGRPKDGPPATLKCDYFIPIRR >YPO0134 hypothetical protein MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDI QLRQLESRLGYLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELE DLYLPYKPKRRTRGQIAIEAGLEPLAERLWQDPQQDPEHTALAYVDADKG VADTKAALDGARYILMERFAEDATLLAKVRQYLWKNAHLVSKVVEGKEQE GAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALDPDPQFDEPPRE SQGEQIIINHLDLRLNNAPADGWRKAVVNWTWRIKVLLHLETELMSTLRE RAEDEAINVFARNMQDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKL VAFDTIYPHTGQAAKAAAVVAALCIKHQVELVAIGNGTASRETERFFVEL QQQYPAVTAQKVIVSEAGASVYSASELASQEFPDLDVSIRGAVSIARRLQ DPLAELVKIDPKSIGVGQYQHDVSQSQLAKKLDAVVEDCVNAVGVDLNTA SVPLLTRVAGLTRMMAQNIVNWRDENGRFRNREQLLKVSRLGPKAFEQCA GFLRINHGDNPLDASTVHPEAYPVVERILAATEQALQDLMGNANALRNLN ARDFTTERFGVPTVTDILRELEKPGRDPRSEFKTATFAEGVETLNDLTPG MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIV KVKVMEVDLQRKRIALTMRLDEQPGETHSRRSNNGTGSERTNNDNRGVNR PHNDAKGHNAPNRAPAKGRSDSSSAGNSAMSDALAAAFKKR >YPO3287 two-component system response regulator MLRVIIVDDEQPAREDLRERLNEEHGIEIVAECSNALEAIPAIQRLQPDV VFLDIQMPRINGLELASMLNPESMPHIVFVTAYDEYAIRAFEEHAFDYLL KPLDHQRLAKTLTRLSRDLIVKNNLHKVIKPILRHIPCSGHNRIFLLKIE EVEYLSSELSGVHVVGTVQSGYTQLSLKTLEEKTPFIRCHRQYMVNTEQL GEIQLMDNGAAEVITRSGKHIPVSRRYLKSLKEKLGIA >YPO1960 putative GntR-family regulatory protein MTRYEQLAQQIRAQIQSKVWQAGDKLPSLRESCKQSGLSLMTVVQSYQLL ESQGWIVARPQSGYYVASRPTQLPQPQRGNKLHLDEQVDINTFIFNVLQA GKDPAIMPFGSAFPDPSLLLQPRLSRALASVARKISPQSSVTNLPPGNES LRRNIAQRYAACGMNVSPEEIVITAGAMESLSLSLQAVTQPGDWVVIESP AFYGALQAIERLRLKAIAITTDPQQGVDLEALEQVISQYPIKACWLMPHF QNPMGATMPWSQKQRLVTLLQQKAISLIEDDVYGELYFGAERLLPAKALD QHRQILHCSSFSKCLAPGFRVGWVAAGEHAQRIQHLQLMSTVSASVPTQL AIADYLSQGGYDTHLRRLRRVMEQRMSTLHQAVVEHFPKNIKISHPAGGY FLWLELEPPFNASELYRRALEQGVSIAPGRMFTTGSQFDHCFRLNASFAW SEQSAKAIRILAKLIGQLTNERR >YPO2537 putative LacI-family transcriptional regulatory protein MKNQRVTLQDIALLAGVTKMTVSRYLRMPEKVAPETGERIAQVMAEVNYS ADPESETSLNQKSPRIGILVPSFNNQIFSDLLAGIESITVANGYQTLVVN YNYNKAREEEQIINLLSCQISGLILTDSEHTLRADKYLNAAEIPIAQVME LEPQENRITVGFNNYQAAYDMTTTLLASGKQHIVYFGSMSDARDRKRYQG YSQAVTDAGFTPLHITPNKVSSVSIGAGMLALARQMYPDVDAIFCTNDDM AVGVLQECLKLGVAIPAEMAISGFHGLDIGQATTPILASVTTPRFEMGKV AAEILIKKIKKIPTIEQVDLHYRISLGGTI >YPO2979 putative lysR-family transcriptional regulatory protein MHYSPEALIAFVEAAALGSFSAAARKLRKSQSTISTAIANLEADLGLTLF DRQARQPVLTDHGRRVLAHVQEILAASERLTDLSIRLAGQVETRLTFVLS DTYYQPAHHENLLRRFEQRYPDVEFECLVAEDEDVIDLLQLKRAHIGVVE MQERYPPDIAATRLAAQTEMAVFVLRGHPLTRLPHLQNEQLATTRQLCLN TYNRTDHNQSQGLTWSAPSYLMLLEMAEQGFGWAILPRWLVEQFGREKLV TLPVQGWPKMISIDAVWSKKSPPGPAGYWLLDQLTEGTNSPH >YPO3131 acrR, putative tetR-family transcriptional regulatory protein MARKTKQKAEETRQQILDAAVREFSAHGVSRTSLTDIAIAAGVTRGAIYW HFKNKVDLFNEVWELSESKIDQLEIEYQAKYPDNPLRILRELLIYILVST REDRRRRALMEIVFHKCEFVGEMTSVHDARKVLDLASYERIESVLQGCID ANQLPVNLNTHRAAIIMRAYITGLMENWLFMPESFDIKQEAPVLIDAYLE MLGQSFSLRNEMNSRVSD >YPO2258 araC, arabinose operon regulatory protein MYQRMVQEPQPNPLLPGYTFNAYLVAGLTPILADGPLDFFIDRPGGMKGY ILNLTIKGQGKIFDGENTIYSNPGDLLLFSPKSPHHYGRSPNSDCWYHRW VYFRPRAYWADWLEWHSKTHEVGRLSLPNNNLMLEFDRLFANIEQTQKSG RRFGEELGMNLLERLLLRAMEEDPLSPQRIMDPRIIEACQFITGNLAGEL RIDEVARHVCLSPSRLAHLFREQVGINILRWREDQRVIRAKLLLQTTQEP IATIGRVVGYDDQLYFSRVFRKRVGVSPSDFRRRSIETNYPQRTFRPADW QDNQGALVRV >YPO0458 arcA, aerobic respiration control protein MQTPHILIVEDEIVTRNTLKSIFEAEGYVVYEANDGAEMHHILSENDINL VIMDINLPGKNGLLLARELREQASVALMFLTGRDNEVDKILGLEIGADDY ITKPFNPRELTIRARNLLSRTMNLSSVGEERRLVESYKFNGWELDINSRS LVSPTGEHYKLPRSEFRAMLHFCENPGKIQSRGELLKKMTGRELKPHDRT VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLEE >YPO3517 argR, arginine repressor MRNPAKQEDLIKAFKALLKEEKFSSQGEIVLALQEEGFENINQSKVSRML TKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDVDYNDSVVVINT SPGAAQLIARLLDSLGKAEGILGSIAGDDTIFTTPARGFTVKQLHEAILR LFEQEL >YPO3346 arsR, arsenical resistance operon repressor MTTLTPLQLFKNLSDETRLNIILLLKASGELCVCELCHRLNEAQPKISRH LAMLRESGLLLDRRAGKWVHYRLSPHIPAWAAAIIEQTYLSQRDEITLLA QGNVTPDSKMLCN >YPO0002 asnC, regulatory protein MSEIYQIDNLDRSILKALMENARTPYAELAKNLAVSPGTIHVRVEKMRQA GIITAACVHVNPKQLGYDVCCFIGIILKSAKDYPSALKKLESLEEVVEAY YTTGHYSIFIKVMCKSIDALQQVLINKIQTIDEIQSTETLISLQNPIMRT IVP >YPO2853 baeR, two-component system response regulator MHESPLSASQSGSVLIVEDEPKLGQLLVDYLQAAGYRTQWLTNGAEVVAT VRQTPPAIILLDLMLPGSDGITLCREIRRFSDIPIVMVTAKTEEIDRLLG LEIGADDYICKPYSPREVVARVKTILRRCSQQRHQPTDDAPLLINESRFQ ASYQGHMLELTPAEFRLLKILASQPGHVFSREQLLNNLYDDYRVVTDRTI DSHIKNLQRKLELLDGEKPFIRAVYGMGYRWEAEMCRLL >YPO3507 basR, two-component system response regulator MKLLIVEDDELLQRGIAMALTSEGYVCDCAATAAEAHSLLQTSQYSMIIL DLGLPDQDGTLLLRQWRRQHVTLPVLILTARDALEDRVDGLDAGADDYLV KPFALAELLARVRALIRRYQGQSDNLVQQDDLSLNLSTQQVCLQGQPLEI TPKEFAILSRLIMRAGQTVNRELLQQDLYTWNDDLSSNTLEVHIHNLRRK LGKDRIRTVRGIGYRLEALS >YPO1167 betI, transcriptional regulator BetI MPKVGMQPIRRQQLIEATMAAVNEVGMHEASIAQIAKRAGVSNGIISHYF RDKNGLLEATMRYLIRHLGEAVKQHLAALSVNDPRARLRAIAEGNFDDSQ INSAAMKTWLAFWASSMHSPQLYRLQQVNNRRLYSNLCAEFKRCLPREQA QLAAKGMAGLIDGLWLRSALSGEHFNRQEALLIIHNYIEQQLNIKYKC >YPO2681 celD, cel operon repressor MVTKMDVRLVRERDFFNGKEFHLFIYNKTESATGLHQHDYYEYTLILTGM CYQEINGKRVFLERGDFIFIPLGSHHQSFYEFGATRILNVGISKAFFEEH YFHLLSRPIVASQAYRLRGDFLSYIESAISAPHYRENEQTELLELLTFYV TNRISHYKESEVNDDIPSWLKATIDKMHDNAMFSEKALVNMVELSGKTQE YLTRATRRYYQKTPMQIINEIRINFAKTQLEVTNYLVSDIAFEAGYSDTT LFIKNFKKLTSFTPGNYRKNFYSARESLSH >YPO2001 copR, transcriptional activator MRLLLVEDEEKTSSYINRALSELGFTVDVAATGIDGLYLALEYDYDTIVL DVMLPGMDGYSVLEGLRASKQTPVLMLSARGSVDERVKGLRHGADDYLPK PFSLIELVARIQALLRRRPSDGVDVSQLHINDLHLDLLARRVTRAGERLE LTAKEFALLSLLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRA KIDTPYPVKLLHTVRGMGYVLETRPDRQTK >YPO0074 cpxR, two component system response regulatory protein MHKILLVDDDRELTSLLKELLEMEGFNVVVAYDGEQALSQLDSSIDLLLL DIMMPRKNGIETLKELRQHHQTPVIMLTARGSELDRVLGLELGADDYLAK PFNDRELVARIRAILRRSNWSEQQQNAEQGAPTLEVDCLQLNPGRQEASF EGQPLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMH ISNLRRKLPDRKDGLPWFKTLRGRGYLMVSET >YPO0896 creB, putative response regulator MMKPLIWLVEDEPSIADTLIYTLESEGFTLRWFDRGEPALAALSSGSPAL AIVDVGLPDINGFDLCRRMLAAAPDLPVIFLTARSEELDRIVGLEIGADD YIAKPFSPREVSARVRTILRRLQKSHLLAVTSTSYQFGHFSLDEAGARVT YHQQILGLTRYEYLLLKTLLLAPERIFSRQQLMDIVWAQAEESQDRTVDT HIKTLRSKLRTVYAEDSPIRTHRGLGYSLGYQP >YPO2659 cspB, cold shock protein MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQN VEFSIEQGQKGPSAVNVVAL >YPO1398 cspB, cold shock-like protein MTLKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDV EFSTYRSIHGPSAADVIAF >YPO1366 cspD, cold shock-like protein METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQIVNF DVHEGPKGNHASLIVPLELNSVPPLDGVSPPELAILA >YPO2595 cspE, cold shock protein E MSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNGFKTLAEGQRV EFEITNGAKGPSAANVIAI >YPO3644 cspa1, major cold shock protein Cspa1 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQN VEFSIENGAKGPSAVNVIAL >YPO3643 cspa2, major cold shock protein Cspa2 MSNKMTGLVKWFDAGKGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQN VEFSIENGAKGPAAVNVIAL >YPO3085 cueR, putative regulatory protein MNISDVAKKTGLTSKAIRFYEEKKLVTPPVRTDNGYRSYTAKHIEELTLL RQARQVGFTLDECRELLALFHNPARHSADVKAATLLKVAEIEQHINDLNQ MRMRLLALAEECPGDEGADCPIINSLAGCCHSSSSLPLK >YPO2219 cysB, transcriptional regulator for cysteine regulon MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFA RSGKHLTQVTPAGLEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATT HTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATE ALHLYDDLIMLPCYHWNRAVVVKPDHPLAGKTHVSIEELAAYPIVTYTFG FTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDP VQDPDLVTVDARDIFTYSTTKIGFRRSTFLRSYMYDFILRFAPHLTRDVV DKAVALRSNEDIEAMFNDIKLPVK >YPO0108 cytR, transcriptional repressor MENKKEFTMTTMKDVAEMAGVSTATVSRALMNPEKVSTVTRQKVEQAVLA VGYSPHALSRNIKRNESRTILVIVPDISDPFFADVIQGIEHAAAQQGYLI LIGDCAQQTQQERTFVNLIITKQIDGMLLLGSNLPFDASKEEQRNLPPMV MANEFAPELELPTVHIDNLTAAYEAVNYLHELGHKRIACIAGPESLPLSH YRLQGYIQALRRNGITVDNDYIIRGDFSYEAGAQSFAALMELPHPPTAIF SHNDVMAVGAIWQAKQLGLRIPQDVSLVGFDDLKLSQFCDPPLTTVAQPR YQIGQQAMLLLLEQLQGHSVQSGSRLLDTELIIRESTAAPKH >YPO1776 dbpA, ATP-dependent RNA helicase MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKT GSGKTAAFGIGLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQ NIKILTLCGGQPMGHQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKT LVLDEADRMLDMGFSDAIDDVIAYTPPQRQTLLFSATYPSGIEQISARVQ RQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHYQPASCVVFCN TKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD VAARGLDIKDLELVINFELAFDPEIHIHRIGRTGRAGMSGLAVSLCTPQE MVRAHTIEDYLQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRP GDILGALTGDAGLTAADVGKIDMFPVHAYVAIRKASAKRALQQLQQGKIK GKNCKARLLK >YPO3488 deaD, cold-shock dead-box protein A MTTELETSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGM AQTGSGKTAAFGLPLLHNIKADLKSPQVLVLAPTRELAVQVAEALSSFSK HINGVNVVALYGGQRYDVQLRALRQGPQVVVGTPGRLLDHLKRGTLNLSN LSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQTALFSATMPEAIRRITR RFMKEPQEVRIQSSVTTRPDISQSYWRVGGGYRKNEALVRFLEAEDFDAA IIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDI LIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLF VENRERRLLQNIERTMKLTIPEVELPNADLLSERRLAKFAAKVSQQLESS DLDMYRALLAKLQPEEEFDIETLAAALLKMAQGERPLILPPEAPRRPQRE FNSRDDRGNDRGSRDRGDSRRDNRSDSRSADSRDGGERPARRERRDVGEM ELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKG MPGEMLSHFTRTRILNKPLNMQLLGDAQPHERRERPAGGNGGERRGGGRP FSGERREGAGAPPRRSFSGDRAPTGGGERRGNRDGQRSAAPRRDDAAAPA AAAAAPARRRFGDA >YPO1322 deoR, deoxyribose operon repressor METRRAERINKLIQALKRSDKIHLKDAANLLRVSEMTIRRDLSAEPTSVI LLGGYVVMDPKSNNANNYFVSDQQAKQVEEKRRIGQLAAQLIIENDTVFF DCGTTIPWIIDEIDEELAFTAICYSLNTFLALQDKPNCKVILCGGEFKPN NCIFTPLSQQSELDNICPNKAFISAAGVSIEYGATCFNFDEILLKHRAMA KSQYKILVADHSKFGKIKPASIGTLAQFDALVTDRPPVAEFYLFFSQHSV KIYC >YPO1206 dinG, putative ATP-dependent helicase DinG MALSSAVKEQISQWYKALQQQIPDFISRAPQRQMIAEVAKTLSGDAGRHL AIEAPTGVGKTLSYLIPGIAVSRAENKPLVVSTANVALQDQIYSKDLPLL KKIIPDLKFTGAFGRGRYVCPRNLAAMCTDVSGQGDLSLFLGDELAPANG EEQATCLALSKSLNSYVWDGLRDHHQLALSDSLWAKLSTDKANCLGRNCH YFRECPFFIARKEIESADVVVANHALVMAALETESVLPNPKELLLVLDEG HHLPDVARDALEIEGEITAVFANMQLDMIVRLVDQCLVQYRPKNPPGLAH PERLKDHCEQLRELMLSVEQQVSQLLPTEGNPAVYRFEMGDLPENLTESC AKLFKLTDALRGVAEFVLNDLSEQTGKHDIVRLHRAMIQMSRTLGYLEAM SKLWRLAAMEKASNAPISKWVTREYRDNQTHIYFHCVGIRVSDQLDKMLW RKVPHVIVTSATLRSLNSFARLQEMSGLSEKAGDRFETLSSPFNHIEQGK LIIPKMRFEPTMANEAEHLAEMAQFFRAQHASGRHKGMLILFSSHRAMQT FLSHVTDLRLMLLVQGDQPRYRLVEEHRKRVNNGTASVLIGLQSFAEGLD LKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFEVQSLPSASFN LIQQVGRLIRSNECRGEIVIYDRRLLTKGYGARLLAALPVFPIEQPDMPE GPLVTPTAVKGPAKRTKRVRKTRDKP >YPO3266 emrR, MarR-family transcriptional regulatory protein MESSFSPIEQMLNSRAKRQKDFPYQEILLTRLSMHMHSKLLENRNKMLKA QGINETLFMALITLDAQESRSIQPSELSAALGSSRTNATRIADELEKKGW IERRESHNDRRCLHLHLTEAGIEFLHQLLPPQHKCLHFLWSTLTEQEQQQ LEMLTRKLLTRLDQMEISEQ >YPO0576 exuR, exu regulon transcriptional regulator MEFTETRRLYQQLAAELKRRIEAGVYPVGDKLPAERYISEEMNVSRTVVR EAIIMLEVEGYVEVRKGSGIHVMSNQQKHLVTNQGIEFDTAGPFELLQAR QLIESNIAEFAATQVTRQDIVQLIEIQKHARQEDRFRDSQWDLKFHVQVA LATQNTAMATIVEKMWSQRTHNPYWIKLHEHIDDVSIESWCEDHDKILEA LIRKDPHASKLAMWQHLENTKQMLFRATTDDFEFNVDRYLFTENPVVHLD NLMNNSKVPISSKN >YPO2144 fadR, fatty acid metabolism regulator MVIKAQSPAGFAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLRE VLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHDSVPQLIDN LLAVRTNIATIFVRTAIRHHPEKAQEILARAKTVDDNAEAFTALDYGIFR GLAFASGNPIYGLILNGLKGLYTRVGRYYFSNPEARKLALTFYNKLSTLC DTESYDQVLECLRTYGKESGAIWHSMQGTMPSDLAEARR >YPO3654 fiS, DNA-binding protein Fis MFEQRVNSDVLTVATVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVSDL YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >YPO1797 flgM, negative regulator of flagellin synthesis MSSIDRTQPLSPVTQVQARESHDVAQQTRQSATQTKTPVSGTEVKLSDAQ AKLMQPGSQDINVERVETLKQAIRSGQLTMDTGKIADALLKNVADELKNH >YPO1843 fliA, flagellar biosynthesis sigma factor FliA MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGI DLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREV ASAMQQVEQRVGRPATEQEVAQVLDIGLVEYRQILLDTNNSQLFSYDEWR EEHGESVEPLLEGHEDANPLKHLLEGNLRQRVIDAIEALPEREKMVLTLY YQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRARLNNDA >YPO0745 fliA, flagellar biosynthesis sigma factor FliA MENREFEACLTLTAEEEGKYLNAYLPLVKRIVRQLSFQADSVIGKEDMQQ IALMGLLEALRRYGHPDGQFAAYAVHRIRGSILDQLREHDWRPRRLRQKT HKTNEAIRQIAKRLGHEPNFEEISAELNLTADEYQEYLLLENAGAMESLD EILALEAHNDILQSRDLEENIIIEDNLKQAISTLDEREQMILHLYYQQEL SMKEIAQVLDLTEARICQLNKKLVQKIKSFF >YPO0543 fruR, putative fructose repressor MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVDKVMAVVREHNYHPN AVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSE DQPDNEMRCVEHLLQRQVDAIIVSTALPPEHPFYQRWAKDPFPIIALDRA LDREHFISVVGADQEDAQMLAQELRSFPAESVLYLGALPELSVSFLREMG FREAWKDDPRKVEYLYANSYEREAAGVLFAEWLKTHPMPQALFTTSFQLL QGVMDVTLKQSGRLPCNLAIATFGDNELLDFLECPVLAVAQRHRDVAERV LELVLASLDEPHKPKPGLTRIRRNLFRRGTLSLSRR >YPO0795 galR, galactose operon repressor MATIKDVAKLAGVSVATVSRVINHSPKASEASRVAVCKAMEQLQYHPNAN ARALAQQSTETVGMIVSDVSDPFFGAMVKAVEQVAYATGNFLLIGNGYHD AEKERQAIEQLIRHRCAALVVHAKKLPDDELTSLMEQIPGMVLINRTLPG FEPRCIALDDRYGAWLATRHLIQQGHKRVAFICSNHQISDALDRMQGYLD ALKEFDIPVDERLITYGTPDELGGEQAMTDLLGRGKHFTAVSCYNDSMAA GALSVLSDNSIDVPQEISLIGFDDVLISRYLRPRLTTIRYPVVAMSTQAA ELALALANNTPLPEITNMFSPTLVRRHSVASPPSLRDDTD >YPO1029 gcvA, glycine cleavage system transcriptional activator MSKRLPPLNALRAFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGL KLFRRRNRSLLLTEEGQSYYLDIKEIFTSINEATRKLQARSAKGALTVSL PPSFAIQWLVPRLSGFNAAYPGIDVRIQAVDREEDKLADDVDVAIFYGRG NWSGLRTERLYAEFLLPVCAPSLLTGENGLKVPSDLANHTLLHDTSRRDW LAYTRQLGVPQINVQQGPIFSHSAMVVQAAVHGQGIALVNNVMAQSEIEA GRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILARAASEQEKLR FRYEN >YPO0120 glpR, glycerol-3-phosphate repressor protein MKQTQRHDAIIELVRLQGYVSTEELVEHFAVSPQTIRRDLNELADQNKIH RHHGGAALPSSSVNAAYNDRKVMWSEEKARIAQRVASQIPDGATLFIDIG TTPEAVAHALMNHKGLRVVTNNLNVATLLTAKEDFRLILAGGEVRTRDGG IIGEATLDFISQFRLDYGILGISGIDMDGSLLEFDYHEVRTKRAIIENSR CVMLVTDHSKFGRNAMVNLGNMNLIDYLFTDQQPPASVMKIIEQHEVQLE LC >YPO3955 gntR, gluconate utilization system Gnt-I transcriptional repressor MKKKRPVLQDVADMVGVTKMTVSRYLRNPEQVSAVLQEKIALALDELGYI PNRAPDILSNATSHAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAH YGYQKEREEQRLTSLLSYNIDGLILSERHHTARTLKMIEVAGIPVIELMD CISPCLDLAVGFNNFEAARQMTQQIIAKGHRYVVYFGARQDERTVIKQQG YEQAMRESGLVPMSVMTSRSSSYSAGAELLREAQVSYPQIDSIFCTNDDL AIGAVFECQRQGLSIPHDMAIAGFHGHDIGQSMVPKLASVLTPRERMGQI GAERLLARLRGEGVTPQMVDVGFTILPGGSI >YPO3505 greA, transcription elongation factor GreA MKQIPMTVRGADKLREELDYLKGVRRPKIISDIADAREHGDLKENAEYHA AREQQGFCEGRIQEIEAKLSNAQVIDITKMPNNGRVIFGATVRVLNLNTE EEQNYRIVGDDEADFKQNLISVNSPIARGLIGKEVDDVVVIHTPGGEVEY EILSVEYV >YPO0135 greB, transcription elongation factor GreB MAKSNYITREGWQALDRELHYLWREERPVVTQAVSEAAAMGDRSENAEYI YGKKRLREIDRRVRFLAKRLEVLKIVDPDPRQEGKVFFGAWVRVENEQEE QRIFRLVGPDEFDPAKKWISIDSPVARALIGKQVDDEVTVQTPNGEATYW ILEIRYRPFDEDRPFNEDIDN >YPO2065 hexR, hex regulon repressor MNTLENIQNSMDLLSKSERKVAEVILASPQTAIHSSIATLAKMANVSEPT VNRFCRRLETKGFPDFKLHLAQSLANGTPYVNRNVEEDDSVAAYTGKIFE STMASLDRVKNNLDIAAINRAVDLLTQAKKISFFGLGSSAAVAHDAMNKF FRFNIPVIYFDDIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARE NDAAVIAITSCDTPLANEATLSLLLDVPEDTDMYMPMVSRIAQLTLIDVL ATGFTLRRGAKFRDNLKRVKEALKESRFDKDSLPVNNGD >YPO1760 hpcR, homoprotocatechuate degradative operon repressor MHESLTIALLQAREAAMAFFRPILKANHLTEQQWRIIRVLADNRSIDFHG LARQTCILRPSLTGILTRMERNNLIFRLKPVNDQRKLYVSLTQEGQNLYD NARPQVEEGYRLIEAAFSPDKMAQLSLLLDEFITVGNKHRQANEMSENEM LEDEE >YPO1973 hutC, putative GntR-family transcriptional regulatory protein MAEQSTVLQLSAAMDDIPAPIYQRVKLAIIRQIRTGTWQPHQRVPSESEL VTELGVSRMTINRALRELTNEGFLIRMQGVGTFVAEAKAHSALLEVHNIA DEIAARGHRHSSQVLHLEARPASPEEAIALGIQPGQQLFYSQIVHYENDF PVQVENRCVNPSTAPDYMKQDFNQITPYSYLTQAAPLTEGEHIVEAVMPS PIERQLLELSEHEPCLLIRRRTWYGKAIVTAAQLLYPGPRYQLYGRFTPQ GTVTS >YPO0916 iciA, chromosome replication initiation inhibitor protein MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPL LVRTVPPRPTEQGQKLLALLHQVELLEEEWLGNDNGVDTPLLLSLAVNAD SLATWLLPALKPVLADLPIRLNLQVEDETRTQERLRRGEVVGAVSIQPQP LPSCLVDQLGALDYLFVASKAFAERYFPNGVTRSALLKAPAVAFDHLDDM HQAFLQQNFDLSPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA SGELIDLTPGLLQRRMLFWHRFAPESRTMRKVTDALLSYGRQVLRQDSFI GQ >YPO3889 ilvY, LysR-family transcriptional regulatory protein MDLRDLKVFLHLAESRHFGRSAKAMHVSPSTLSRQIQRLEETIGQPLFLR DNRTVQLTDAGNQLKAFAQQTLLQYQQLLHALGQHGPSLSGELRLFCSVT AAYSHLPPILDRFRARHPLVEIKLTTGDAADAVNKVQSNEADLGIAGRPE VLPTSVAFTQIGEIPLVLIAPALPCAVRSQVAVEKPDWAMIPFILPEHGP SRKRIDLWFRRQRITNPLIYATVSGHEAIVSMVALGCGVALIPSVVVDNS PEPVRNRISLLDDVSLVEPFELGVCVPKKRLQEPLIDAFWGLL >YPO1714 kdgR, IclR-family transcriptional regulatory protein MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYR FLQTMKSLGYVAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMREL SNETRETIHLGALDEDSIVYIHKIDSMYNLRMHSRIGRRNPLHSTAIGKV LLAWRDRGEVEEILSHIEFTRSTKYTLDSTAALLPVLDKVREQGFGEDIE EQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFAEDRKSDYVKSLHCAAR NISEQMGYRDYPF >YPO2688 kdpE, two-component regulatory protein response regulator KdpE MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQD LRQWSAIPIIVLSARNNEEDKVAALDAGADDYLSKPFGISELLARVRVAL RRHSGASQESPLVNFADISVDLINRQVTRAGENLHLTPIEFRLLTALLAN AGKVITQRQLLNQVWGPNYVEHSHYLRIYMGHLRQKLEADPTRPKHLLTE TGVGYRFIP >YPO0849 lacI, lactose operon repressor MKSKSTTLEDVARHAGVSYQTVSRVLNKSAKVSEATRRKVEQSIELLRYV PNRLAQQLVGKQSMTMGLVTTSLALHAPSQVAAAIKRYAHIEGYQVLISM IDESVNQSIQHSINDLKSQWVGKVIINVPLETAVAEKIAADNDDVTCLFL DVDPYSSVFNVSFNPADGTRASVKYLYELGHREIALLAGPKQSVSANLRL KSWLETLADYGLSPVSVIHGNWDAQSGYSGALQMLRETPQFSAVLVANDQ MALGVLSAFHQNQLAVPGEKSVIGYDDTYESSFFYPALTTVSLDLDLQGK EAVRRMLSASDNESMRSSSILPAKLVVRNSTGPQAKEHRDLQKIAEELRL IAQRLAS >YPO0535 leuO, leucine transcriptional activator MSEYNLVTDSQATKKESIDVHLRSVDLNLLTVFDAVMQMQNVTRAAQSLG MSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARARQLFGPVRQALQLVQ NELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQSAPNVQLVIKS YLNDNIEHQLRYQETEFVIGYTEFDRPDFHRIPLFKDELVLAVSKDHPRI NDSITENQLLSESHAVVSLDKKGSFSEPYYDSTTSTQSIAYESTDMNSVL NIVSQTYFVAIAPRWLVKTYSEALNLKLISLPWENTSRACYLTWHESTDR DKGHQWMKALLGQFSSPV >YPO0314 lexA, LexA repressor MKALTTRQQEVYDLVRDHLAQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL ARKGVIEIVSGASRGIRLLMEEEEGLPLIGRVAAGEPLLAQQHIEGHYKV DPSLFKPGADFLLRVNGMSMRDIGILDGDLLAVHKTQDVRNGQVVVARID DEVTVKRLKKQGNIVHLLPENSEFQPIVVDLREQSFTIEGLAVGVIRNGD WI >YPO1375 lrp, leucine-responsive regulatory protein MIDNKKRPGKELDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVR RLERQGFIHGYTALLNPQYLDASLLVIVEITLNRGAPDVFEQFNAAVKNL EEIQECHLVSGDFDYLLKTRVPDMSAYRTLLGETLLRLPGVNDTRTYVVM EEVKQSNRLVIKTR >YPO0797 lysR, transcriptional activator protein LysR MPAISLRQIEIFHGVMTTGNLTEAALLLQTSQPTVSRELARFEQLVQLTL FERVRGRLYPTVQGLRLFEEVQRSYYGLDRIKQAAEGIRQFQHAQLSIAC LPVFSQSLLPAVCKPFIDRYPEVSLNVIPQESPLLEEWFSAQRHDLGLTE NIQTPAGTQRHTLMTVNEVCVLPADHPLREKSVLTPQDFNGENFVSLSVT DSYRQLLDNLFAEEKVTRRLVMETHSAASVCAMVREGVGVSIVNPLTALD YLSKGRGSGVCVRPFSVDIPFTVSLIQPLHRPSSTLVDTFVGHLKQQTTL FQQRLATVIAPAC >YPO0123 malT, transcriptional regulator MalT MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIA QWAADQSNLGWYSLDESDNQSERFATYLIAAIQLATGGHCSKSEALSQKH QYANLSALFSQLFIELSNWDGPLYLVIDDYHLITNDAIHEAMRFFLRHQP ENLTLIILSRTLPSLGIANLRVRDQLLELGMQQLAFNHHEAQQFFECRLS SPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSAKRLAGLNASH LSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEE LERQGLFIHRMDDSAEWFCFHPLFATFLRQRCQWELALELPELHHAAAEG WMALGYPAEAIHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTAL PYPLLVQNPELALLQAWLAQSQHRYSEVNTLLEQAELAMQERKIPVDEIL RAEFGALRAQVAINAGKPDEAEKLATDALKYLPMAHYYSRIVATSVTGEV HHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEILIAQGFLQAA YETQEKAFELIREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGV EILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEALQHGSQYHLD WITNADKPRVIHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARV QIILGRFDEAEVVLDELNENARRLRLTSDLNRNLLLSNTLYWQTERKGEA QKALIESLTLANRTGFISHFVIEGEAMAQQLRQLIQLNALPELEQHRAQR ILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLTQREWQVLGLI YSGYSNDQIANELDVAATTIKTHIRNLYQKLGVAHRQEAVQQAQRLLQMM GYV >YPO0114 metJ, transcriptional repressor protein MetJ MAEWNGEYVSPYAEHGKKSKQVKKITVSIPLKVLKILTDERTRRQVNNLR HATNSELLCEAFLHAFTGQPLPNDEDLRKERSDEIPEAAKILMRELGVDP DTWEY >YPO3789 metR, lysR-family transcriptional regulatory protein MIELKHLRTLQALRNTGSLAAAATQLHQTQSALSHQFSDLEQRLGFRLFV RKSQPLRFTTQGEILLQLAEQVLPQIKQALQTCNEPHQTALRIAIECHSC IQWLTPALDNFHKHWPQVTMDFKSGVTFDPQPALQQGELDLVLTSDILPR SGLHYSPMFDFEVRLVLAPDHPLANKDRIEPEDLAPEVLMIYPVQRQRLD VWRHFLQPAGVSPSSKNVDNTLLLIQMVSARMGIAALPHWVVESFERQGL VVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARQHACDHLPFVKDAV RSNAGVPTAKPLSPQLQ >YPO1625 mfd, transcription-repair coupling factor MSQQYRYSLPERRGDTRQLGQLTGSACAVECAEIIERHDGPVMLITPDMQ TALRLRDEIQQFSPQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLPA MKRGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGY RSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQ RTLVEVEQINLLPAHEFPIDKAAIELFRSQWREQFEVRRDNEHIYQQVSK GIWPAGIEYWQPLFFSQQLPTLFSYLPENTLLVNTGDLESSAERFWQDVN QRFESRRVDPMRPLLAPESLWLRVDALFNELKEWPRVQLKTEAQPAKAAN TNLCYQPLPDLSVQAQQKAPLDNLRRFIESFHGSVVFSVESEGRRETLQD LLARIKLSPTLITTLSQAANPGHYLMVGASERGFLDTDKQLALICESDLL GERVSRRRQDNRRTINTDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLE AGGIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVW SRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFE TTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNK QVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAA EGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVD ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIRE AILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARITIGHGQMRERDL ERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLR GRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDL EIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGREPSLEDLTSN QTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELDELKVELIDRF GKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGENNKVDPVYL IGLLQRQPQIYRLEGPTKLKLVQDLSDRAQRLKFITELLAAFAQHRIA >YPO2268 mlc, putative ROK family transcriptional regulatory protein MIMDGQPGHIDQIKQTNVGAVYRLIDLLGPISRIELSKRAQLAPASITKI VRELVEVHLVKETEYQDVGSRGRPAIGLVLDTEAWHYVSGRISRGTITLA LRDLSSKLVVEEQIPLPDRHPEPLLSRILNEVDQFFIRHQKKLERLTAIA ITMPGIIDAPAGIVHKMPFYDVNEMSLGPALEQRTGLPVYLQHDICAWTM AESLYGASRGCQNIIQVVIDHNVGAGVITSGRVLHAGSRSVVNIGHTQVD PYGKRCYCGNHGCLETVASIDNMLAIAQQRLNSSMSSLLHHTPLSVESLC DAALAGDQLAKDIILGVGHSVGRIIAIMVNLFNPEKILVGSPLNKASSIL HPAIASCIRQQALPAYSENILVESTEFFNQGTMPGAALVKEALYNGSLLV KLLQG >YPO4066 mtlR, mannitol operon repressor MIEKKQAFENRVLEHLNAGKTVRSFLMAAVDLLAEALNILVVQIFRKDDY AVKYAVEPLLVGDGPLSELSVRLKLVYALGVITRHEYEDAELLMALREEL NHDGTEYRFTDDEILGPFGELHCVDELPPVPTFLRPDEADASLIAMQRQR YQQMVRSTMVLSITELLSRISVKQVSKLSPLSQG >YPO2625 nagC, putative N-acetylglucosamine regulatory protein MMSTGGQAQIGNVDLVKQLNGAAVYRLIDQQGPISRIQIADLSQLAPASV TKITRQLLERGLIKEVDQQASTGGRRAISIVTENRQFHTVAVRLGRNDAT ITLFDMSGKSLGEEHYALPERTQETLEHALFNIISQFIDAYQRKLRELIA IAVILPGLVEQSKGIVRYMPHISVSNWPLVDNLQARFNVTSFVGHDIRSL ALAEHYFGATRDCEDSILVRLHRGTGAGIIVNSQIFLGSNGNVGEIGHIQ IDPLGDRCYCGNFGCLETVASNAAIENRVKHLLTQGYPSKLSLDDCHIGA ICKAANRGDLLACEVIEHVGRYLGKAIAITINLFNPQKVVIAGEIIEAEK ILLPAIQGCINTQVLKNFRQNLPIVTSQLNHQSAIGAFALAKRAMLNGVL LQRLLETHP >YPO3041 narP, nitrate/nitrite response regulator protein NarP MTKSHTILIVDDHPLMRRGIKQLLGLDSRFDVVAEANNGSDAITEAAKFQ PDVILLDLNMKGMSGLDTLKALRHNGSDARIIILTVSDARSDVYAMIDAG ADGYLLKDCEPEILLENIRQAARGENVFSDEVIQYLSSRHEQVNPFSELT ERELDVLQEVARGMSNKQVAFELHISEETVKVHIRNLLRKLNVRSRVAAT IMYLENKKY >YPO0471 nhaR, transcriptional activator protein NhaR MRMSHINFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEGRLGG KLFKRRGRGLVPSELGQLVFRYADKMFMLSQEMLDIVNYRKESHLLFDVG VADALSKRLVSQVLETAVVEHEKIHLRCFESTHEMLLEQLSQHKLDMILS DCPVDSSQQEGLFSVKLGECSVSFYCRQPVPDLPFPASLQQKRLLIPGRR SMLGRKLLNWINSKGLKVEVLGEFDDAALMNAFAVYHDAIFVAPTIYAAD TYANDSEIIEIGRLDNVQEEYYVIFAERMIQHPAVQRVCNKDFSALFNC >YPO3497 nusA, transcription elongation factor NusA MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIEVRVSID RKTGDFDTFRRWVAVDEVTMPTREITLDAAQFEDPSLQLGDYVEDQIESV TFDRITTQTAKQVIVQKVREAERAMVVEQFRQYLGQIVTGIVKKVSRDSI ALDLGHNAEAVIGREDMLPRENFRPGDRIRGVLYDVRPEARGAQLFVSRS RSEMLVELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKTNDKRIDPVGA CVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDVAVEASNLAQAIGRNGQNVRLAAQLSGWELNVMTADDLQAKHQA EAHAAIDTFTKYLDIDEDFATVLVEEGFSSLEELAYVPMKELLEIDGLDE DTVEALRDRAKAALTTLALAQEESFGDQKPADDLLNLAGLERSMAFKLAA RGVCTLEDLAEQGIDDLADIEGLSDEQAGELIMAARNICWFGDNA >YPO3181 nusB, transcription antitermination protein NusB MKPAARRRARECAVQALYSWQLSKNDIADVELQFLSEQDVKDVDIAYFRE LLSGVAVNAASLDALMAPFLSRQLEELGQVERAVLRIALFELSKRDDVPY KVAINEAIELAKTFGAEDSHKFVNGVLDKVAPTVRKRK >YPO3752 nusG, transcription antitermination protein NusG MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHDMEELFGEVMVPTEEVV EIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRP APISDKEVDAIMNRLQQVGDKPRPKTLFEPGELVRVSDGPFADFNGVVEE VDYEKSRLKVSVSIFGRATPVELDFSQVEKG >YPO0136 ompR, osmolarity response regulator MQENHKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAIIAFGKFKLNLGTR EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGNKA >YPO3915 oxyR, oxidative stress transcriptional regulatory protein MNIRDLEYLVALAEFRHFRRAADSCHVSQPTLSGQIRKLEDELGIMLLER TSRKVLFTQAGLLLVEQAKTVLREVKVLKEMASLQGESMSGPLHIGLIPT VGPYLLPQIIPMLHKTFPKLEMYLHEAQTQNLLAQLDSGKLDCAILALVK ETEAFIEIPLFDEPMNLAIYADHPWANRERVEMHELAGEKLLMLEDGHCL RDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPNERQ RDGVCYLECYKPVPKRTIALVYRPGSPLRGRYEQLAEAIRDHMQERMAPS LEQAI >YPO3420 pdhR, transcriptional regulator of pyruvate dehydrogenase complex MAYNKIRQPKLSDVIEQQLEYLILEGTLRPGEKLLPERELAKQFDVSRPS LREAIQRLEAKGLLLRRQGGGTFVQTNLWQSFSDPLAELLADHPESQFDL LETRHALEGIAAYYAALRGTDEDLQRIRECHTVIQQAQDNGDLDAEADAV MQYQVAVTEAAHNVVLLHLLRCMGPMLEQNVRQNFELLYLRREMLATVSS HRARIFEAIVAREPEKAREASHRHLAFIEEILLDLSREHSRRERSLRRLQ QRKE >YPO2556 pecT, LysR-family transcriptional regulatory protein MTNANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLE QLVGKELFARHGRNKLLTEHGLQLLGYARKILRFNDEACTSLMYSNMEGS LIIGASDDTADTLLPFLLNRVATLYPRLAIDVRVKRSPFIADMLSSGEVD LAITTAKVDSHPHVILRTSPTLWYCSVDYQFQPGEPVPLVVMDEPSLYRE MAIEHLTQAGVPWRIAYVASSLSAIRAAVRAGLGVTARPIEMMSPDLRVL GETEGLPGLPETRYVLCKDKQCDNELALAIFSALQNSYQHTMSSESSLIL DSDYLTGDED >YPO3456 phnF, probable gntR-family transcriptional regulatory protein MNLSRPPTSYPTRYQHIAAQLEQELRGHYRCGDYLPSEQQLADRYQVNRH TLRRAVDELVERGWLQRRQGIGILVLMRPYDYPLHANARFSQNLLDQGSD PTSERLLAVLRPAAEPVAKALSLTEGESVIHLRTLRRVNGVPVCIIDHYL PDLSWWPVLQRFHSGSLHQFIAQHLQQPLKRSQTRISARRAQAKESALLE IATHAPLLCVRTLNTRVDSQQVAEYSLSLTRADMIELTMEH >YPO3205 phoB, phosphate regulon transcriptional regulatory protein MARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVARLSEPFPDLV LLDWMLPGGSGIQFIKHMKREALTRDIPVMMLTARGEEEDRVRGLEVGAD DYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMAND QALDMGPTEFKLLHFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIR RLRKALETDGHDKMVQTVRGTGYRFSTRY >YPO1634 phoP, response regulator protein MRVLVVEDNALLRHHLTVQMREMGHQVDAAEDAKEADYFLQEHAPDIAII DLGLPGEDGLSLIRRWRSHQENLPILVLTARESWQDKVAVLEAGADDYVT KPFHLEEVIARMQALMRRNIGLASQIIELPPFQIDLSRRELCVNQQQIKL TAFEYTIIETLIRNAGKVVSKDTLMLQLYPDAELRESHTIDVLMGRLRKK LLAEHQGEVITTIRSQGYRFDVN >YPO1301 psaE, putative regulatory protein MSHCVVLNKLESVLIIGDSRYALSKNEVLLLECLYLRAGDVISHDELLTT CWPDRVVSPTSLPVAIKHIRDVFRKITRSEVIKTYKNEGYSYQKDSVLII IDDGSTEKESHSAAYTRKEKPDIPIKLVGLQILSHLNSTFFIAIMMVIII IFFMVGGNDIVSFIDSDTNSVIITNVTTKMNGPTAGLPKVKNSMIFKDDF GLVIICDQSECKQQ >YPO2351 pspA, phage shock protein A MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEIRSTSARA LAEKKQLLRRIDHSESQQQEWQEKAELALRKDKEDLARAALIEKQKVMTL VETLKREVATVDETLSRMKHEITELENKLTETRARQQALTLRHQAASSSR DVRRQLDSGKLDEAMARFEQFERRIDHMEAEAETVGVGKQKSLDQQFAEL RADDEISSQLAALKAKMKSVE >YPO2349 pspC, phage shock protein C MANVLGSKKLYRVPEEGMIKGVCAGLAHYFDIPVRLVRVIMVLSLFFGLF VFTVAAYIILAFMLEPVSAASVTNDNDVTPRQLLDQLQHELAQGEQQLRQ VERYVTSDTFGVRSRFRQL >YPO2352 pspF, psp operon transcriptional activator MNEQLDNLLGEANAFVDVLEQVSGLAKLNKPVLVIGERGTGKELIAHRLH YLSERWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHLGRFERAD GGTLFLDELATAPMLVQEKLLRVIEYGHLERVGGSQPLQVDVRLVCATND NLPALAAAGKFRADLLDRLAFDVVQLPPLRERQQDIMLLAEHFAILMCRE LGLPLFSGFTATAKEQLLEYRWPGNVRELKNVVERSVYRHSDSSLPLNNI IINPFASNQKGEIEGVDTPNEGGAVLPALPVDLKHWLHTSEHQMLTRALK QARFNQRKAAHLLGLTYHQLRGLLKKHTILSGELPQVSDSGE >YPO2807 ptxR, putative LysR-family transcriptional regulatory protein MLKENFNELQSFLVVARERSFTKAAGKLGVSQSALSHAIKGLEERLNLRL LTRTTRSVAPTEAGERIIACLEPRLADLEQELETLLQLNGTVSGNIRLSA GEHAARSLLWPKLKPFLRKYPEINVELVVDNGFVNIVDGRFDAGVRLGES VDKDMIAVKIGPEMRMAVVGSPEYFMANAIPVTPHELQHHRCINMRLPTA GGLYHWEFEKEGKPLRVKVEGQLTLNILPERIDAAQSGFGLACVPEDSIQ AFLRSGKLIQVLEAWCPSFPGYYLYYPSRKQHPPVFALMIDALRYSD >YPO2387 purR, purine nucleotide synthesis repressor MATIKDVAKHAGVSTTTVSHVINKTRFVAENTKAAVWAAIKELHYSPSAV ARSLKVNHTKSIGLLATSSEAPYFAEVIEAVENSCYSKGYTLILCNSHNN LDKQKAYLAMLAQKRVDGLLVMCSEYPDQLLGMLEDYRNIPMVVMDWGTA RGDFTDSIIDNAFEGGYLAGRYLIERGHRDIGAIPGQLARNTGGGRHQGF LKALEEANIPVREEWIVQGDFEPESGYKAMHQILTQKHRPTAVFCGGDIM AMGAICAADELGLRVPQDISVIGYDNVRNARYFSPALTTIHQPKERLGET AFAMLLDRIVSKREDPQTIEVHPKLVERRSVADGPFRDYRR >YPO1218 rcsB, probable two component response regulator component B MNNLNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLSKLDA NVLITDLSMPGDKYGDGITLIKYIKRHYPDLAIIVLTMNNNPAILSSVLD LDIDGIVLKQGAPADLPKALAALQKGKKFTPESVAKLLEKISANGYGDKR LSPKESEVLRLFAEGFLVTEIARKLNRSIKTISSQKKSAMLKLGVDNDIA LLNYLSSVTISQVDKEL >YPO0036 recG, ATP-dependent DNA helicase MKGRLLDAVPLSTLSGVGASQAGKLAKIGLETIQDLLLHLPLRYEDRTRL YRIGDLLPGLSVTVEGEVLRSDISFGRRRMMTCQISDGSGVLTLRFFNFN AAMKNSLSVGKHVIAYGEAKRGNNGPEIIHPEYRVHGENIGVELQESLTP VYPTTEGIRQATLRKLIDQALAMLDTCVIAELLPIELSRSLISLPEAIHT LHRPPADIQLADLEQGKHPAQRRLIMEELLAHNLSMLAVRAGAQSYRALP LMAEEQLKQRFLAALPFTPTQAQQRVVAEIERDMTQSFPMMRLIQGDVGS GKTLVAALAALRAIAHGKQVALMAPTELLAEQHATTFRQWLEPLGFSVGW LAGKQKGKARLAQQEAVASGQVSMVIGTHAMFQEQVQFSGLALVIIDEQH RFGVHQRLTLWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE LPPGRTPVTTVAIPDTRRSDVIQRVKNACLEEGRQAYWVCTLIEESELLE AQAAEVTCEELKIALPEIKVGLVHGRMKGPEKQAIMLAFKQGELQLLVAT TVIEVGVDVPNASLMIIDNPERLGLAQLHQLRGRVGRGAVASHCVLLYKT PLSKTAQMRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQTGSAEFKVAD LLRDQAMIPEVQRVARHLHQQYPEHAKALIERWLPERVRYTNA >YPO3380 relA, GTP pyrophosphokinase MVAVRSAHLNPAGEFALDDWIASLGLANPQSSERLAETWRYCEQQTQNHP DASLLLWRGLEMVEILSTLSMDNDSMRAALLFPLVDANIVDETTLTEQFG KGITYLVHGVRDMDAIRQLKATHNDSMSSEQVDNVRRMLLAMVEDFRCVV IKLAERIAHLREVKDAPEDERVLAAKECSNIYAPLANRLGIGQIKWELED FCFRYLHPDEYKKIAKLLHERRIDREQFIDDFVASLHKAMADEGIKADIY GRPKHIYSIWRKMQKKSLAFDELFDVRAVRVVVERLQDCYAALGIVHTHF RHLPDEFDDYVANPKPNGYQSIHTVVLGPRGKTLEIQIRTRQMHEDAELG VAAHWKYKEGAVAAGRSSYEGRIAWLRKLIAWQEEMADSGEMLDEVRSQV FDDRVYVFTPKGDVIDLPAGSTPLDFAYHIHSDVGHRCIGAKISGRIVPF TYQLQMGDQIEIITQKQPNPSRDWLNPNLGYITTSRGRSKIHNWFRKQDR DKNILAGRQMLDDELEHLDISLKEAEKLLVPRYNMNSMDEVLAAIGGGDI RLNQMVNFLQGKLNKPTAEEADLEALRHLNNKHQPAPRNASKDSGRIVVE GVGNLMHHIARCCQPIPGDQIIGFITQGRGISIHRADCEQLAELESHAPE RIVDAVWGESYSSGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASR SDTKKMVATIDMDIEIYNLQVLGRVLAKLNQLPDVIDARRLHGN >YPO3770 rfaH, transcriptional activator RfaH MKSWYLLYCKRGQILRAKEHLERQTVNCWTPIVAIEKIVRGKRIEVIEAL FPNYLFAEFDPENIHTTTVSATRGGSHFVRFGTQPAVIPATVIADMQAHA VDKIIAPEVPKPGDIVKIIDGVFAGLQAIYTEPDGEARSMLLLNMLNSQI KHSLDNRQFEKQ >YPO3860 rffC, putative lipopolysaccharide biosynthesis protein MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDL SLVVGEKEGIGTENATSEPNMGAYSLRVATEADIPQLRRVAASAFALSRF RAPWYDAQDSGRFYALWVEKAVLGTFDHQCLLVLDPTDQPVGFVTLRDLQ DGSARIGLLAVFPGAQSKGIGLRLMSAAKQWCQHHGLHRLRVATQMSNIA ALRLYIRSGASIESTAYWLCRG >YPO0333 rhaR, L-rhamnose operon transcriptional activator MRAPLLLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGL HVLNDHPYRITCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQW HKLLPPLGPEQNQGYWRLTTQGMAQARPIIQQLAQESRKTDSWSIQLTEV LLLQLAIVLKRHRYRAEQAHLLPDGEQLDLIMSALQQSLGAYFDMADFCH KNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAAR CGFEDSNYFSAVFTREAGMTPRDYRQRFIRSPVLPAKNEP >YPO0332 rhaS, L-rhamnose operon regulatory protein MTVLHSIDFFSSSSAPVAIEARAPQSAFPEHHHDFYEIVIVEEGAGVHVF NGNPYTLSRGCVCFVRDHDRHLFESTDDLFLTNVLFRAPDAFRFLSGVGH FLPRECDGVYPSHWRVNGQVLQQIKCLIACLEHAPKSDQVEDIALHESVF MQLLVKLWQGCQTQVGDDQEGRLYQLLDWLQNNYSEAVEWPELADRFALP LRTLHRQLKNKTGMTPQRYLTRLHLLQARHQLCYSDNSVTDIAYLCGFGD SNHFSTLFKREFSQSPRDLRSQL >YPO3869 rhlB, ATP-dependent RNA helicase MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVA GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQI HSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK QNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT LSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTL IEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRA GESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLA RTRTGNGPRRNSAPRRSGAPRNNRKRPG >YPO3867 rho, transcription termination factor Rho MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIF GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGK IRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERG NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIATSIAYNHP DCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKA KRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIA EKRVFPAIDFNRSGTRKEELLTTTDELQKMWILRRILHPMGEIDAMEFLI SKLATAKTNDQFFDNMRRS >YPO2235 rnb, exoribonuclease II MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQ MKKVMHGDRIIATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIV PDHPLLRDAIQCRPVRELTHSFQNGDWAVAEMCRHPLKGDRAFQADLTAF ITNGEDHFVPWWVTLARHNLEREAPAMVESALNDAELEREDLTALNFVTI DSASTEDMDDALFVQDNGDGSWLLTIAIADPTAYVVENSELDLTARKRAF TNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTITEEGTLSNDIRF SAAWVESKAKLVYDDVSDWLEGNNRWQPQDTAIAEQITLLKRICDARSNW RQQHALVFKDRPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCA ALALREHLGFGIYNVHTGFDPALVEQAASVLKANGVGADPQALLTLPGFC ELRRHLDALPTQFLDSRIRRFQTFAEISTVPGPHFGLGLEAYATWTSPIR KYGDMVNHRLLKAMITGQQAEKPQEEITVQLAERRRLNRMAERDVGDWLY ARYLQPQAGTDTRFTAEIIDITRGGLRVRLLDNGAVAFIPAPFIHAVRDE VVCSQETGTVQIKGETVYSQSDKIEVRIAEVRMETRNVIARPVA >YPO2718 rncS, ribonuclease III MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSF VIANELYRRFPRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGE LKSGGFRRESILADTVEALIGGVFLDSDIHTIERLILEWYHSRLEEISPG DKQKDPKTRLQEYLQGRHLPLPSYLVVQVRGEAHDQEFTIHCQVSGLNEP VIGTGSSRRKAEQAAAEQALKQLELE >YPO3695 rnk, nucleoside diphosphate kinase regulator MTKPTITINELDAERLDALLAQPAFAGSVVATALNEELDRAEILPPNEIP ADVVTMNSRVRFLDLNSQEEHIRTLVYPASLKDSNEQLSVMAPLGAALLG LHVNDEISWKLPGGDETRITVLELLYQPESAGEYHR >YPO0380 rnr, ribonuclease R MSQDPFLEREAEKYESPIPSREFILAHLAKRETPASREELANELNLTGEE PLEALRRRLRAMERDGQLVFTRRQCYALPERLDLLRGTVIGHRDGYGFLR VEGSKDDLYLSAEQMKMAIHGDVVLAQVVGADRKGRREARIVRVLVPKTS QIVGRYFTDAGTGFVVPDDSRLSFDILIPAEATCGARMGFVVVVELTQRP TRRTKAVGKIVEVLGENMGTSMAVDIALRTHEIPHTWPPQVEKQVADLKE QVPEEAKKGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPQTALDDEARSRGNSVYFPSQVIPMLPEVLSNGLCSLNPQVDR LCMVCEMTISSQGKLSSYKFYEAVMSSHARLTYTKVWRIIDGEESLREQY KPLVPHLEELHAMYKVLDQARAERGGIAFETEEAKFIFNAERRIERIEPT VRNDAHKLIEECMILANIAAARFVEKHEEPALFRVHDRPSDDHIVALRSV LNELGLTLGGGLKPQPKDYSVLMDEISDRPDHEMLQTMLLRSMKQAVYDP ENRGHFGLALASYGHFTSPIRRYPDLAMHRAIKYQLAKEHGNLKDRWTPT GGWHSDFEDMLQLGQHCSMTERRADEATRDVADWLKCDFMLDQVGNVFTG IIASVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRYDNIGQRLIGESSGVV YRLGDTVEIRVDAVHMDERKIDFALVSSTRKPRGEGKTARDKAKNNGQRT LRSNSAGRGSSSGSSRRDGAPTAGGQKRPRRAKKPVNFEPDSAFRPDAAA AKPDDKALAEKKAKAKAKRASAKTKKIAAATKAKRAKKKTTSDQ >YPO0234 rpoA, DNA-directed RNA polymerase alpha subunit MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSS MPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVIL TLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASINMRIKVQRGR GYVPASARIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDK LVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFD PILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >YPO3747 rpoB, DNA-directed RNA polymerase beta subunit MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQHGLE AAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKL RLVIYEREAPEGTVKDIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLH RSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDR RRKLPATIILRALNFTTAQILDLFFEKVVFEIRDNKLQMELVPERLRGET ASFDIEANGKVYVEKARRITARHIRQLEKDGIDRIEVPVEYIAGKVVAKD YVDASTGELICAANMELSLDLLAKLSQAGHKQIETLFTNDLDHGAYISET LRVDPTSDRLSALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAV GRMKFNRSLLRDEIEGSGILSKEDITEVMKKLIDIRNGRGEVDDIDHLGN RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISA AVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDV HPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT DEINYLSAIEEGNFVIAQANSNLDDEGRFLEDLVTCRSKGESSLFSREQV DYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLV GTGMERAVAVDSGVTSVAKRGGTVQYVDASRIVIKVNEDEMHPGEAGIDI YNLTKYTRSNQNTCINQMPCVNLGEPIERGDVLADGPSTDLGELALGQNM RVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEI TADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEE MQLKQAKKDLTEELQILEAGLFARIHAVLVSGGIEAEKLSKLPRERWLEL GLTDEDKQNQLEQLAEQYDEMKSEFEKKMDAKRRKITQGDDLAPGVLKIV KVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNP LGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVAKLREFIQKAYD LGDNVCQKVDLSTFTDDEVLRLAENLKKGMPIATPVFDGATEKEIKELLQ LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGS YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNG RTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELEEE >YPO3746 rpoC, DNA-directed RNA polymerase beta' subunit MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFK PERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRE RMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGG MTNLERRQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKNMDLEAECEI LREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLR PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS GRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKM VEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII VPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKV RITEEIRNTEGESITRTSIIDTTVGRAILWMIVPQGLPYSIVNQPLGKKA ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEAK AGIIEEAETEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMDN LSVEDVVNRDGVVEQQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKP DGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL VDVAQDLVVTEDDCGTHNGIVMTPVIEGGDVKEPLRDRVLGRVTAEEVIK PGSADILVPRNTLLDEKWCDLLEENSVDSVKVRSVVSCETDFGVCANCYG RDLARGHIINKGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSI QVKNKGSLKLSNVKFVTNAAGKLVITSRNTELKLIDEFGRTKESYKVPYG AVMAKGDGAEVQGGETVANWDPHIMPVVTEVSGFIRFADMVDGQTITRQT DELTGLSSLVVLDSAERTGSGKDLRPALKIVDAKGNDVLIPGTDMPAQYF LPGKAIVQLEDGIQIGAGDTLARIPQESSGTKDITGGLPRVADLFEARRP KEPAILAEISGIISFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE GEVVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKIND KHIEVIVRQMLRKGTIVDAGSTDFLEGEQAEMSRVKIANRKLAAEGKIEA TFTRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKEN VIVGRLIPAGTGYAYHQDRMRRKAQGEAPVVPQVSADEATANLAELLNAG FGNNKG >YPO0643 rpoD, RNA polymerase sigma factor MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMIND MGIQVLEEAPDADDLMLAENTTDTDDDAAEAAAQVLSSVESEIGRTTDPV RMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQY DRVEAGESRLSDLITGFVDPNAEEDIAPTATHVGSELSTEEMDDEDEDED EDDDAEDDNSIDPELARQKFSDLREQYENARMEIKKNGRNHANAAAEILK LSEVFKQFRLVPKQFDYLVNNMRAMMDRVRTQERIIMKLCVEQCKMPKKN FVTLFSSNETSDTWFNAAVAMGKPWSEKLKDVSEDVQRSLQKLRQIEEET GLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQF LDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIR IPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIA KEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGL TAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHP SRSEVLRSFLDD >YPO2711 rpoE, RNA polymerase sigma-70 factor MSEQLTDQMLVERVQKGDQQSFNLLVIRYQHKVASLVSRYVPQGDVPDVV QESFIKAYRALESFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDA NDAENYENAGALKEISNPENLMLSEELRQIVFKTIESLPEDLRMAITLRE LDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIQR >YPO3811 rpoH, RNA polymerase sigma factor MTKEMQTLALVPQGSLEAYIRAANAYPMLTAEEERELAERLHYQGDLGAA KQLILSHLRFVAHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVR LVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFN QDEVELVAKELGVTSKDVREMESRMSAQDMTFDPSPDDEARDGQFMAPVL YLQDKTSDFADGIEEDNWDSHAADKLSYALEGLDERSQHIIRARWLDDEN KSTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA >YPO3582 rpoN, DNA-directed RNA polymerase subunit N MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQT DLHEEIDAKETVDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGM GNDYSDDELPVYQGETTQTLQDYLMWQVDLTPFTETDAAIATSIVDAVDD TGYLTVPLEDILESMGDENVALDEVEAVLKRIQHFDPIGVAARNLRECLL VQLSQYAKDTPYLAEARLIVSEYLDLLGNHDFRMMIRLSRLKEDTLKEAI ALIQSLDPRPGQSINTGESEYVIPDVLVRKEKGIWTVELNADSIPRLKVN QQYAAMGNSVRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQ QVEFFEKGAEFMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELK YFFSSHVNTDSGGEASSTAIRALVKKLVAAENPAKPLSDSKLTTLLCEQG IMVARRTVAKYRESLSIPPSNQRKQLV >YPO3355 rpoS, RNA polymerase sigma factor MSQSTLKVNELHEDADFDENSTETEIFDEKALVDDEPTESELADDELLAQ GVTQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVSSRRRMIESN LRLVVKIARRYSNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATW WIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEI AEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILSDENENGPED TTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLT RERVRQIQVEGLRRLREILQTQGLSIEALFRE >YPO0039 rpoZ, DNA-directed RNA polymerase omega subunit MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIA LREIEEGLITNQILDVRERQEQQEQQAAEIQAVTAIAEGRR >YPO3737 rsd, regulator of sigma D MLNRLESLTQRVGGSNELIDQWLHARKELLVSYCTVIGIKPQKEKHTPLN AKTLENFCHNLVDYLSSGHFHLYDRIIKEVEGASSPKMALTAKIHPALKN NTQTIMAFHDCYTNIEIDDDSCTEYQQALSDIGEALDARFRLEDQLIQWA AESWQAAQLADADKKSQVN >YPO2308 rstA, two-component regulatory system, response regulator protein MSKIVFVEDDPEVGKLIAAYLGKHDIDVFVEPRGDTAQAVIEQQQPDLVL LDIMLPGKDGMTLCRDLRPHYDGPIVLLTSLDSDMNHILSLEMGANDYIL KTTPPAVLLARLRLHLRQHNQRLRQQTPLQAKETISSPPTGYNAIHFGLL CIDPVNRQVNLDDEEISLSTSDFDLLWELATHAGIIMAREALLKNLRGIS YDGMDRSIDVAISRLRRKLYDNALDPFRIKTVRNKGYLFAPNAWESKQ >YPO2099 rzpR, putative prophage endopeptidase MPGKLTTALIAVIAALLVGVTYYQNEAAKLQRDVVEIASVANQQKKDLQL IEAQRQAVAAIDIKTTKELADVKSENERLRTDIASGTKRLQLNATCSKPA PKTTGPASVPDDASARLTNAAERDYLSLRERIGIATSQISGLQDYITNVC LK >YPO2785 sfsB, putative DNA-binding protein MDKQDWHPADILAGLKKRGTTMAALSRKSGLASSTLANTLLRPWPKGERL IAEVLELHPAEIWPSRYLKPKKSPAESVNPG >YPO0046 slmA, nucleoid occlusion protein MAEKENTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYR HFPSKTRMFDSLIEFIEDSLMSRINLILQDEKETFNRLRLILLLVLGFAE RNPGLTRIMTGHALMFEQDRLQGRINQLFERIEMQLRQVLREKKLRDGQG FIHDEALLATQLLAFCEGMLSRFVRSEFRYCPTQEFDSRWPLIVAQLQ >YPO2374 slyA, transcriptional regulator SlyA MESTLGSDLARLVRVWRALIDHRLKPLELTQTHWVTLYNINRLPPEQSQI QLAKAIGIEQPSLVRTLDQLEEKGLITRHTCANDRRAKRIKLTEQSSPII EQVDGVICSTRKEILGGISSDEIAVLSGLIDKLEKNIIQLQTK >YPO0038 spoT, guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase MYLFESLNLLIQRYLPEEQIKRLKQAYLVARDAHEGQTRSSGEPYITHPV AVACILAEMRLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV SKLDKLNFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL RPDKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVIKE VVKAARGNRKEMIQKILAEIEGRLTEAGIPCRVSGREKHLYSIYCKMHLK EQRFHSIMDIYAFRVIVKEVDTCYRVLGQAHSLYKPRPGRVKDYIAIPKA NGYQSLHTSLIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEQGESGTT AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL PAGATPVDFAYVVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPG ARPNAAWLNFVVSSKARAKIRQLLKNLKRDESVSLGRRLLNHALGNGRKL SDISEENIKHELDRMKLATVDDLLAEIGLGNAMSVVVAKNLLGDPSTLGT SASGTRKLPIKGADGVLITFAKCCRPIPGDPIIAHISPGKGLVIHHESCR NIRGYQKEPEKFMAVEWDQETEQEFIAEIKVDMFNQQGALANLTAAINAA ESNIQSLNTEEKDGRVYSAFIRLTTRNRVHLANIMRKIRIMPDVVKVSRN RN >YPO2708 srmB, ATP-dependent RNA helicase MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPT GTGKTAAFLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELA KYTQLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRA VETLILDEADRMLDMGFAQDIETISAETRWRKQTLLFSATLEGEAIREFA ERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLCHLLKQPDVSK SIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVN VLVATDIASRGLDIDDISHVFNFDMPRTADVYLHRIGRTGRAGRKGVAIS LVEAHDHILLGKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLA KRKEQKESSKEKVKVKVRHRDAKNVGKRRTPKAKPDTKSAG >YPO3698 treR, trehalose repressor MQNRLTIKDIARMSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQHGFTP SKSARAMRGQSDKVVGIIVSRLDSPSENQAVRTMLPLFYQQGYDPILMES QFDTTLVSEHLHILQQRHVDGVILFGFSGLTAEMLAPWQEKMVVLAREYR GFSSVCYDDEGAIYLLMDKLRQAGHRHISYIGVQSSDATTGMRRYQAYLD YSQQHGLTPMVALGELSYQSGFQLAPQVITPQTSALVCASDTIAMGVSKY LQQQEREQPPIQVCGIGNTPLLHFLFPDTLTIELGYGRAGVKAAQQLLDQ LSNSQPIQQIIIPGQLV >YPO0453 trpR, Trp operon repressor MTDEKQVSDSLNRQTAGNPYSAADPALSAEDNQHWLSFVALLQNAITQDL HLPLLQLMLTPDERTALGTRVRIIEELMRGELSQRELKSQLGAGIATITR GSNSLKTAPPQLKSWLEAQLLANKR >YPO2344 tyrR, transcriptional regulatory protein MRLEVFCEDRLGLTRELLDLLVLRSIDLRGIEIDPIGRIYLNFSSLDFSI FSALMMEIRHIDGVTDVRTVSFMPSEREHRSLRALLESMPEPVFSIDLKG NLELSNPAARALFSLSEEKIRHKTAGSLLGGYNFSRWFEGGDTAPHTERV LINNQDYLMEITPINLEDENQKKQTVGAVVMLKSTARMGQQLQTLSVNDD TEFRQIVAASTKMRQVLAQARKLAMLDAPLLLVGDTGTGKDLLARACHLR SPRGKMPFLGLNCASLPDEVVESELFGYAAGAYPNAIEGKKGFFEQANGG SVLLDEIGEMSPRMQIKLLRFLNDGTFRRVGEEHEVHVDVRVICATQKNL VELVQRGEFREDLYYRLNVLTITLPPLRERQTDIMPLTELFVARFSDEQG VPRPKLSPELASFLTHYGWPGNVRQLKNAIYRALTQLEGAELRPQDIILP EFEIEATLGDEVLDGSLDDISKRFERSVLTRLYRNYPSTRKLAKRLGVSH TAIANKLREYGLSSKRPASDENEEE >YPO4012 uhpA, two-component system response regulator MTYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQAN ICICDISMPDENGLDLLKGLPSGMGVIMLSMHDSPALVETALERGARGFL SKRCKPEDLISAVRTVGSGGVYLMPEIAQQLARVAVDPLTRREREIAVLL AEGMEVREIAESLGLSPKTVHVHRANLFAKLGISNNVELAKKVLNL >YPO2670 ureG, urease accessory protein MTDKSTARKKITRIGIGGPVGSGKTAIIEVITPILIKRGIKPLIITNDIV TTEDAKQVKRTLKGILDEEKILGVETGACPHTAVREDPSMNIAAVEEMEE RFPESDLIMIESGGDNLTLTFSPALADFYIYVIDVAEGEKIPRKNGPGLV QADILVINKIDLAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEEL VDMIMRDFLFTHVQPEGEQA >YPO1865 uvrY, response regulator MISVLLVDDHELVRAGIRRILDDIKGIKVAGEMQCGEDAVKWCRSHVVDI VLMDMNMPGIGGLEATRKILRFSPDTKVIMLTIHTENPLPAKVMQAGAGG YLSKGAAPQDVITAIRMVHAGQRYIASDIAQQMALSQLEPPAETPFSCLS ERELQIMIMITKGQKVNEISEQLHLSPKTVNSYRYRMFSKLNISGDVELT HLAIRHGLFNAETLSNSD >YPO1912 ybtA, transcriptional regulator YbtA MTESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGH FARPETLQLHDDLGRINFSCILEGTSRFAIQGLRRHTDWELARNRHYITH TPDCRGSASYCGRFESITLSFSPETLALWVPDISAVIKNKIDSHCCCQQQ RCNAETHLTAQALRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEH REDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELARESGLSVLKI KRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHF SAAFQKQFGVTPSTFKRVM >YPO2457 ypeR, quorum-sensing transcriptional activator YpeR MIINFFDNESINEDIKNYIQRRIKAYGNIRYSYLLMNKKVPLHPAIISNY PLDWVKKYKKNSYHLIDPVILTAKGKVAPFAWDDNSVINIKSTDSAVFNL AREYNIVNGYTFVLHDNNNNMATLNVSSGDDDSIFFDESIEVNKEKIQML LIFIHDKMLGLYNKSHHENNTLNKKENKREIFSPRENEILYWASVGKTYS EIAIILGIKKSTVKFHIGNIVRKLGVLNAKHAIRLGIELQLIKPI >YPO0985 yspR, quorum-sensing transcriptional regulator MHSVFNRSNEVIETLRDYIDRKLTIYDSPKYTYMVINKKNPGDIFIVTSY PNEWAELYTNNNYQNIDPVVLIAFRRFSPFSWDENITVLSELKLSKIFTL SKKYNIVNGFTFVLHDTMNNLAMLSLIMDDSALNGVESRVLNDRDRLQML LIETHEKMLTLSQRNMNIQERQGKGMPGKAILSPRENEVLYWASMGKTYQ EIAIITNITPRTVKYHIGNVVKKLGVINAKQAIGLGVELEIIKPILA >YPO0236 zntR, zinc-responsive transcriptional regulator MLKIGQLAKLADVTPDTIRYYEKQGMMDHGERTDGGYRLYTDQDLQRLRF IRYAKQLGFTLDTIAELLSIRIDPDHHTCQESKSIVDSRLSDVEGKIREL ERMRDSLKRLSEACCGTSHATTYCSILEALEQGATEELIKV